Effects of Magnetic and Electric Field Uniformity on Coded Aperture Imaging Quality in a Cycloidal Mass Analyzer

Cycloidal mass analyzers are unique sector mass analyzers as they exhibit perfect double focusing, making them ideal for incorporating spatial aperture coding, which can increase the throughput of a mass analyzer without affecting the resolving power. However, the focusing properties of the cycloidal mass analyzer depend on the uniformity of the electric and magnetic fields. In this paper, finite element simulation and charged particle tracing were used to investigate the effect of field uniformity on imaging performance of a cycloidal mass analyzer. For the magnetic field, we evaluate a new permanent magnet geometry by comparing it to a traditional geometry. Results indicate that creating an aperture image in a cycloidal mass spectrometer with the same FWHM as the slit requires less than 1% variation in magnetic field strength along the ion trajectories. The new magnet design, called the opposed dipole magnet, has less than 1% field variation over an area approximately 62 × 65 mm; nearly twice the area available in a traditional design of similar size and weight. This allows ion imaging across larger detector arrays without loss of resolving power. In addition, we compare the aperture imaging quality of a traditionally used cycloidal mass spectrometer electric design with a new optimized design with improved field uniformity.

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Liquid chromatography-mass spectrometry with collision-induced dissociation of conjugated metabolites of benzol[a]pyrene

Benzo[a]pyrene (BP) metabolites conjugated with glutathione, cysteine-glycine, cysteine, N-acetylcysteine, and sulfuric and glucuronic acids have been studied by microcolumn liquid chromatography-electrospray mass spectrometry with collision-induced dissociation (CID) on a hybrid double focusing magnetic sector-orthogonal time-of-flight tandem mass spectrometer equipped with a focal plane array detector. Negative-ion electrospray mass spectra of the conjugated BP metabolites showed strong [M – H]^? ions. When the array detector was used, spectra were obtained from femtomoles of sample infused at mass resolutions of 5000 (full width at half maximum). Cone voltage fragmentation spectra show [M-H]^? ions and fragment ions indicative of the BP moiety and/or the conjugating group. Linked scan CID spectra at constant B/E were found to contain structurally informative product ions from infusion of as little as 1 pmol of sample. CID spectra were also recorded by using the double focusing sectors for precursor ion selection and the orthogonal time-of-flight analyzer for product ion mass separation. The method was applied to the analysis of conjugated BP metabolites in the urine of germ-free rats given a single intraperitoneal dose of BP.     

Ideal velocity focusing in a reflectron time-of-flight mass spectrometer

A single-stage ion mirror in a time-of-flight (TOF) mass spectrometer (MS) can perform first order velocity focusing of ions initially located at a start focal plane while second order velocity focusing can be achieved using a double-stage reflectron. The situation is quite different when an ion source extraction field is taken into account. In this case which is common in any practical matrix-assisted laser desorption/ionization (MALDI) TOF-MS a single-stage reflectron, for example, cannot perform velocity focusing at all. In this paper an exact, analytic solution for an electric field inside a one-dimensional reflectron has been found to achieve universal temporal focusing of ions having an initial velocity distribution. The general solution is valid for arbitrary electric field distributions in the upstream (from the ion source to the reflectron) and downstream (from the reflectron to an ion detector) regions and in a decelerating part of the reflectron of a reflectron TOF mass spectrometer. The results obtained are especially useful for designing MALDI reflectron TOF mass spectrometers in which the initial velocity distribution of MALDI ions is the major limiting factor for achieving high mass resolution. Using analytical expressions obtained for an arbitrary case, convenient working formulas are derived for the case of a reflectron TOF-MS with a dual-stage extraction ion source. The special case of a MALDI reflectron TOF-MS with an ion source having a low acceleration voltage (or large extraction region) is considered. The formulas derived correct the effect of the acceleration regions in a MALDI ion source and after the reflectron before detecting ions.     

Ion optical evaluation of a miniature double-focusing mass spectrograph

A new miniature double-focusing mass spectrograph has been designed and constructed. The ion optical system was designed based on Mattauch-Herzog geometry. The mass spectrograph employs a focal plane detector consisting of a microchannel plate, a phosphor layer, a fiber-optic plate and a charge-coupled device. For the evaluation of the ion optics of the instrument, the energy and angular focal planes were investigated both experimentally and by simulation. Double focusing was satisfactorily achieved along a straight line over a wide mass range, and the experimental and simulated results were mutually consistent. A second-order element of the transfer matrix was also measured experimentally and proved to be in good agreement with the simulated result.     

Asymmetric rectilinear ion trap with unidirectional ion ejection capability

In this paper, the shapes of the electrodes are modified based on a rectilinear ion trap to achieve unidirectional ejection of ions. The designed asymmetric rectilinear ion trap (ARIT) analyzer adds convex and concave circular structures with a height of 0.5 mm on the two X‐electrodes, so that the electric field center of the ion trap is inclined to the concave side. The electric field lines of the convex side are compressed to the concave side. Both simulations and experimental results show that ions are more likely to emit from the slit on the concave side plate when performing ion resonance ejection. The mass spectrum signal intensity can reach more than twice that of the original rectilinear trap when using only one detector. Calculations of the electric field components in the trap show that the even‐order higher field proportion in the ion trap has not been significantly affected. Combined with the experimental test results, the study further confirmed that the developed ARIT has no significant loss in mass resolution, tandem mass spectrometry capability, and quantitative analysis capability. The proposed asymmetric structure modification scheme can achieve single‐side ejection without significantly affecting other performances of the analyzer, which provides a new idea for the structural optimization of the subsequent ion trap analyzers.     

On the impossibility of double focusing in combined electric and magnetic fields homogeneous in Euler’ terms

The use of Euler’s homogeneous electric and magnetic fields can be a good basis for designing static mass spectrometers capable of operating in a spectrographic mode and enabling recording of mass spectra with a wide mass range in one measurement. It is proved mathematically that, when combined Euler’s homogeneous electric and magnetic fields are used to design a single-cascade mass-spectrometer, the double focusing mode cannot be achieved practically along the entire focal line. It is demonstrated that the use of mass spectrographic schemes in which the electric stage and the magnetic stage are separated is an inevitable solution in the creating of a mass spectrograph with high analytical performance.     

Deconvolution of mass spectra measured with a non-uniform detector array to give accurate ion abundances

Array detectors are under active development since they offer large improvements in the efficiency of mass spectrum measurements. High quality is always a requirement whether array detectors are used for ions, electrons, UV, x-rays, etc., but in mass spectrometry the very high accuracy frequently needed in ion abundance measurements for isotope ratios is unique. These demands necessitate modelling the measurement process and careful deconvolution of the measured data. A linear model in terms of matrix algebra is presented in which the incident spectrum (unknown) and the measured spectrum are represented by column matrices and the action of the detector array on the incident spectrum is represented by an experimentally measurable square 'A' matrix. Residual noise in this matrix can be minimized following a singular value decomposition procedure and its use in 'forward deconvolution' of measured spectra is discussed. The random error in the incident ion counts is accounted for after the deconvolution since this is not an error from the perspective of the detector. The microchannel plate electron multiplier gain distribution is an important feature of the deconvolution.     

Proof of Concept Coded Aperture Miniature Mass Spectrometer Using a Cycloidal Sector Mass Analyzer,a Carbon Nanotube (CNT) Field Emission Electron Ionization Source,and an Array Detector

Despite many potential applications, miniature mass spectrometers have had limited adoption in the field due to the tradeoff between throughput and resolution that limits their performance relative to laboratory instruments. Recently, a solution to this tradeoff has been demonstrated by using spatially coded apertures in magnetic sector mass spectrometers, enabling throughput and signal-to-background improvements of greater than an order of magnitude with no loss of resolution. This paper describes a proof of concept demonstration of a cycloidal coded aperture miniature mass spectrometer (C-CAMMS) demonstrating use of spatially coded apertures in a cycloidal sector mass analyzer for the first time. C-CAMMS also incorporates a miniature carbon nanotube (CNT) field emission electron ionization source and a capacitive transimpedance amplifier (CTIA) ion array detector. Results confirm the cycloidal mass analyzer’s compatibility with aperture coding. A >10× increase in throughput was achieved without loss of resolution compared with a single slit instrument. Several areas where additional improvement can be realized are identified.

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Co-occurrence of boundary and resonance ejection in a multiplexed rectilinear ion trap mass spectrometer

A method is reported for evaluating ion trap mass analyzers by selection of operating conditions under which both boundary and resonance ejection peaks occur in a single mass scan. The choice of frequency and amplitude of the auxiliary waveform applied for resonance ejection can be such as to produce a resonance ejection mass spectrum with unit resolution or, under selected conditions, signals attributable to both boundary and resonance ejection in a single mass scan. The contrasting mass resolution associated with these two ejection processes is evident in these data. The co-occurrence of the two ejection phenomena is ascribed to the effects of higher-order fields; it is more marked in some rectilinear ion traps (RITs) than in other nominally identical devices, leading to the possibility of using it to compare individual mass analyzers in multiplexed instruments. The method is used to compare multiple ion traps driven by the same RF signal in a fully-multiplexed mass spectrometer, composed of parallel ion source/mass analyzer/detector channels each housed in one quadrant of a specialized vacuum chamber.     

Quadrupole ion traps and trap arrays: geometry, material, scale, performance

Quadrupole ion traps are reviewed, emphasizing recent developments, especially the investigation of new geometries, guided by multiple particle simulations such as the ITSIM program. These geometries include linear ion traps (LITs) and the simplified rectilinear ion trap (RIT). Various methods of fabrication are described, including the use of rapid prototyping apparatus (RPA), in which 3D objects are generated through point-by-point laser polymerization. Fabrication in silicon using multilayer semi-conductor fabrication techniques has been used to construct arrays of micro-traps. The performance of instruments containing individual traps as well as arrays of traps of various sizes and geometries is reviewed. Two types of array are differentiated. In the first type, trap arrays constitute fully multiplexed mass spectrometers in which multiple samples are examined using multiple sources, analyzers and detectors, to achieve high throughput analysis. In the second, an array of individual traps acts collectively as a composite trap to increase trapping capacity and performance for a single sample. Much progress has been made in building miniaturized mass spectrometers; a specific example is a 10 kg hand-held tandem mass spectrometer based on the RIT mass analyzer. The performance of this instrument in air and water analysis, using membrane sampling, is described.     

Detection of positive and negative ions from a flowing atmospheric pressure afterglow using a mattauch-herzog mass spectrograph equipped with a faraday-strip array detector

An ambient desorption/ionization (ADI) source, known as the flowing atmospheric pressure afterglow (FAPA), has been coupled to a Mattauch-Herzog mass spectrograph (MHMS) equipped with a focal plane camera (FPC) array detector. The FAPA ionization source enables direct mass spectral analysis of solids, liquids, and gases through either positive or negative ionization modes. In either case, spectra are generally simple with dominant peaks being the molecular ions or protonated molecular ions. Use of the FAPA source with the MHMS allows the FPC detector to be characterized for the determination of molecular species, whereas previously only atomic mass spectrometry (MS) has been demonstrated. Furthermore, the FPC is shown to be sensitive to negative ions without the need to change any detector parameters. The analysis of solid, liquid, and gaseous samples through positive and negative ionization is demonstrated with detection limits (1–25 fmol/s, ∼0. 3–10 pg of analyte per mL of helium) surpassing those obtained with the FAPA source coupled to a time-of-flight mass analyzer.     

Miniature mass analyzers

Increased efforts are being made to develop miniature mass spectrometers, including those which are hand-portable, and to retain the performance characteristics of traditional laboratory instruments as much as possible in the miniature instruments. This review of miniature mass analyzers emphasizes analytical performance and compares the relative merits of each type of miniature mass analyzer. Miniature instruments discussed include sector, Wien filter, time-of-flight, linear quadrupole, quadrupole ion trap and Fourier transform ion cyclotron resonance mass spectrometers, as well as combinations of and variations on these major types. Special considerations that apply to small mass analyzers are noted and suggestions are made regarding the possible future development of this field. Copyright 2000 John Wiley & Sons, Ltd.     

A new mass spectrograph

The optical designs of two new types of mass spectrographs were studied. The first is a system that possesses a specially shaped magnet output boundary to satisfy the double-focusing condition for a wide mass range. The focal plane is usually curved. The second system is one in which a parallel ion beam is generated before the magnet, forming a straight double-focusing line. By introducing a quadrupole lens doublet such that the ion beam may be deflected in the same direction through the electric and magnetic fields, the overall image magnification can be arbitrarily controlled and stigmatic focusing achieved for the median ray.     

Characterization by three-dimensional representation of sequential transitions of metastable ions in a double focusing mass spectrometer

The ion currents due to products of selected ion reactions of toluene and 3-chlorophenol, occurring in the source or flight tube of a double focusing mass spectrometer for which the electric sector precedes the magnetic sector, have been represented by plotting them against two variables that reflect independently the effects of the sectors. The daughter ion produced from the molecular ion of 3-chlorophenol that decays by sequential losses of CO in the field free region preceding the electric sector and Cl˙ in the field free region preceding the magnetic sector gives rise to a peak with a distinctive shape on the resultant three-dimensional surface. A peak due to the daughter ion arising from the corresponding sequential losses of H˙ and C₂H₂ from the molecular ion of toluene could not be detected. A portion of the ion kinetic energy spectrum which would be recorded by a detector at the energy resolving slit is derived from the surface for 3-chlorophenol and is in satisfactory agreement with a published spectrum.     

Development and Investigation of a Mesh-Electrode Linear Ion Trap (ME-LIT) Mass Analyzer

A mesh-electrode linear ion trap (ME-LIT) mass analyzer was developed and its performance was primarily characterized. In conventional linear ion trap mass analyzers, the trapped ions are mass-selected and then ejected in a radial direction by a slot on a trap electrode. The presence of slots can strongly affect the electric field distribution in the ion trapping region and distort the mass analysis performance. To compensate for detrimental electric field effects, the slot is usually designed and fabricated to be as small as possible, and also has very high mechanical accuracy and symmetry. A ME-LIT with several mesh electrodes was built to compensate for the effects caused by slots. Each mesh electrode was fabricated from a plate electrode with a relatively large slot and the slot was covered with a conductive mesh. Our preliminary experimental results show that the ME-LIT could considerably diminish the detrimental electric field effects caused by slots, and increase the mass resolving power and ion detection efficiency. Even with 4-mm-wide slots, a mass resolution in excess of 600 was obtained using the ME-LIT. Mass resolution could be remarkably improved using mesh electrodes in ion traps with asymmetric electrodes. The stability diagram of the ME-LIT was mapped, and highly efficient tandem mass spectrometry was demonstrated. The ME-LIT was qualified as a LIT mass analyzer. The ME-LIT can improve the mass resolution and decrease the requirements of mechanical accuracy and symmetry of slots, so it shows potential for a wide range of practical uses.

Contribution to the Design and Construction of Thermic Flow Detectors for Liquids

Thermic detectors are seldom used in analytical laboratories, in spite of their advantageous properties. Their theoretical basis provides simple relations and useful equations for the design and construction of thermic liquid analyzers. In this paper a home-made detector system was used for the continuous determination of hydrochloric acid. The results were in accordance with the theoretical considerations. This revised version was published online in July 2006 with corrections to the Cover Date.     

Time-Resolved Imaging of the MALDI Linear-TOF Ion Cloud: Direct Visualization and Exploitation of Ion Optical Phenomena Using a Position- and Time-Sensitive Detector

In this study, we describe the implementation of a position- and time-sensitive detection system (Timepix detector) to directly visualize the spatial distributions of the matrix-assisted laser desorption ionization ion cloud in a linear-time-of-flight (MALDI linear-ToF) as it is projected onto the detector surface. These time-resolved images allow direct visualization of m/z-dependent ion focusing effects that occur within the ion source of the instrument. The influence of key parameters, namely extraction voltage (E _V ), pulsed-ion extraction (PIE) delay, and even the matrix-dependent initial ion velocity was investigated and were found to alter the focusing properties of the ion-optical system. Under certain conditions where the spatial focal plane coincides with the detector plane, so-called x-y space focusing could be observed (i.e., the focusing of the ion cloud to a small, well-defined spot on the detector). Such conditions allow for the stigmatic ion imaging of intact proteins for the first time on a commercial linear ToF-MS system. In combination with the ion-optical magnification of the system (~100×), a spatial resolving power of 11–16 μm with a pixel size of 550 nm was recorded within a laser spot diameter of ~125 μm. This study demonstrates both the diagnostic and analytical advantages offered by the Timepix detector in ToF-MS.

新型三角形电极圆环离子阱的理论模拟研究

圆环离子阱由于其离子储存能力明显优于相同体积下的三维离子阱,近年来被认为是离子阱小型化发展的另一个重要方向。为进一步优化圆环形离子阱的质谱性能,特别是质量分辨能力,本研究提出了一种由三角形电极构建的新型圆环离子阱,它由两个完全等同的、截面为三角形的圆环电极及两个大小不等的圆筒型电极所组成,离子通过共振激发方式弹出。通过理论模拟和对电极结构的优化,获得了具有非对称性的三角形电极结构,通过改善圆环结构,优化电场分布,提高了离子引出效率和离子阱的质量分辨能力,其中一种最优化结构的圆环离子阱对m/z 609离子的质量分辨率达到1486。     

Distance-of-Flight Mass Spectrometry: What,Why, and How?

Distance-of-flight mass spectrometry (DOFMS) separates ions of different mass-to-charge (m/z) by the distance they travel in a given time after acceleration. Like time-of-flight mass spectrometry (TOFMS), separation and mass assignment are based on ion velocity. However, DOFMS is not a variant of TOFMS; different methods of ion focusing and detection are used. In DOFMS, ions are driven orthogonally, at the detection time, onto an array of detectors parallel to the flight path. Through the independent detection of each m/z, DOFMS can provide both wider dynamic range and increased throughput for m/z of interest compared with conventional TOFMS. The iso-mass focusing and detection of ions is achieved by constant-momentum acceleration (CMA) and a linear-field ion mirror. Improved energy focus (including turn-around) is achieved in DOFMS, but the initial spatial dispersion of ions remains unchanged upon detection. Therefore, the point-source nature of surface ionization techniques could put them at an advantage for DOFMS. To date, three types of position-sensitive detectors have been used for DOFMS: a microchannel plate with a phosphorescent screen, a focal plane camera, and an IonCCD array; advances in detector technology will likely improve DOFMS figures-of-merit. In addition, the combination of CMA with TOF detection has provided improved resolution and duty factor over a narrow m/z range (compared with conventional, single-pass TOFMS). The unique characteristics of DOFMS can enable the intact collection of large biomolecules, clusters, and organisms. DOFMS might also play a key role in achieving the long-sought goal of simultaneous MS/MS.

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Resolution and mass accuracy in matrix-assisted laser desorption ionization-time-of-flight

A mathematical model of time-of-flight mass analyzers employing uniform electric fields is presented that allows “exact” calculations of flight times as functions of mass-to-charge ratio, initial velocity and position, applied voltages, and instrument geometry. An “approximate” equation based on a series expansion of the “exact” result is derived which allows focusing conditions and limits on resolution to be determined for different instrument geometries and operating conditions. The fundamental theory is applied to predicting resolution and mass accuracy in matrix-assisted laser desorption ionization-time of flight. In this case higher order velocity focusing can provide excellent correction for the initial velocity distribution of a selected mass-to-charge ratio, but the focusing is mass-to-charge ratio dependent. There is generally a trade-off between ultimate resolution at a particular mass-to-charge ratio and resolution and mass accuracy over a broad mass range. In most practical applications the latter is more important. Calculations are compared with experimental results for a particular analyzer geometry, both at theoretical optimum velocity focus and at operating conditions where ultimate resolution is sacrificed for a broader range of relatively high resolution and better mass accuracy.