Synthesis,crystal structure,and BSA interaction with a new Co(II) complex based on 5-(trifluoromethyl)pyridine-2-carboxylic acid

Abstract

A new complex, Co(Htpc)₂(H₂O)₂ (1) (Htpc = 5-(trifluoromethyl)pyridine-2-carboxylic acid), has been synthesized and characterized by X-ray single-crystal diffraction, elemental analysis, infrared spectral analysis, and thermogravimetric analysis. Meanwhile, the optimized geometric structure of the ligand was determined using the M06-2X functional of density functional theory (DFT) with the 6-311?+?G(d, p) basis set. The gap energies ΔE between the frontier molecular orbitals were computed in different solvent media (water, methanol and ethanol) using the time dependent density functional theory (TD-DFT)/M06-2X by applying the Polarizable Continuum Model (PCM). The coordination sphere around Co(II) is distorted octahedral with two chelating tpc^- ligands and two coordinated water molecules. Bovine serum albumin (BSA) binding properties of the ligand, CoCl₂·6H₂O and 1 were investigated by fluorescence and UV–Vis absorption spectroscopy, revealing 1 exhibits higher binding affinity with BSA than free ligand and CoCl₂·6H₂O. ΔG, ΔH and ΔS at 298 and 308?K manifested that van der Waals interactions and hydrogen bonds were the main forces in the binding process.     

Correlation between Absorption and Substitution of Photochromic 1,2-Bis(thienyl)ethenes (BTEs) Using Modified Spectroscopic Hammett Equations

Series of photochromic 1,2-bis(thienyl)ethenes possessing perfluorocyclopentene backbones, either hydrogen or methyl groups at the β-positions of the thiophenes, and a variety of substituents in their α'-positions were prepared, which cover the range from electron-donating to electron-withdrawing (Me, −CH₂OH, −OTBS, −TMS, −Br, 1,3-dioxan-2-yl, pyridin-4-yl, −CH₂OH, −COOH). As a linear free energy relationship the spectroscopic Hammett equation gives fair to excellent fits to the excitation energy of the absorption maxima of the ring-opened as well as the ring-closed forms of the BTEs, when Hammett substituent constants σ_p were replaced by Brown's modified substituent constants σ_p⁺ and σ_p⁻. Vice versa, hitherto unknown Hammett-Brown substituent constants can be estimated from the UV spectra. Furthermore, we compared the experimentally measured absorption maxima with values which we calculated by three different methods (DFT STEOM-DLPNO-CCSD/def2-TZVPP, TD-DFT ωB97X-D3/6-31G*, TD-DFT ωB97X-D3/6-311++G**).     

Bichromophoric hemicyanine dyes as fluorescence probes applied for monitoring of the photochemically initiated polymerization

The spectroscopic properties of series homodimmeric hemicyanine dyes based on (p-N,N-dimethylaminostyryl)benzothiazolium, (p-N,N-dimethylaminostyryl)benzoxazolium, (p-N,N-dimethylaminostyryl)-2,3,3-trimethyl-3H-indolium residues were determined. The absorption and fluorescence spectra of the dyes under study were measured in different polarity solvents at room temperature. On the basis of the solvatochromic behavior the ground state (μ_g) and excited state (μ_e) dipole moments of bis-(N,N-dimethylaminostyryl) derivatives were evaluated. The dipole moments (μ_g and μ_e) were estimated from solvatochromic shifts of absorption and fluorescence spectra as function of dielectric constant (ε) and refractive index (n) of applied solvents. The absorption and fluorescence spectra are only slightly affected by the solvent polarity. The analysis of solvatochromic behavior of the fluorescence spectra as a function of Δf (ε, n) revealed that the emission occurs from a high polarity excited state. The large dipole moment changes along with the red-shifted fluorescence, as the solvent polarity is increased, demonstrates the formation of an intramolecular charge transfer state (ICT). Six bichromophoric hemicyanine dyes, possessing benzothiazole, benzoxazole or indolinium group linked by 5 or 10 methylene groups were evaluated as fluorescence probes applied for monitoring of the polymerization process. The study on the changes in fluorescence intensity and spectroscopic shift of studied compounds were carried out during photochemically initiated polymerization of 2-ethyl-2-(hydroxymethyl)-propane-1,3-diol triacrylate (TMPTA).     

Effect of solvent on absorption and fluorescence spectra of a typical fluorinated azo dye for its acidic and basic structures

The effect of 15 polar solvents on absorption and fluorescence energies of a typical fluorinated azo dye, 4-(2,3,5,6-tetrafluoro-pyridin-4-yl azo)-phenol, was reported for its acidic, MH, and basic, M, structures.For MH, the absorption energy is described on the basis of multi-linear equation with Taft's π* (solvent polarity) and β (hydrogen bond acceptor) parameters while the fluorescence energy varies rectilinearly with free energy of transferring the proton to the surrounding solvent, ΔG_t°.For M, the hydrogen bonding donor ability of protic solvent, α, is a predominant factor which affects the absorption energy while in aprotic solvents, the absorption energy correlates linearly with Kirkwood function. As the ability of the solvent for hydrogen bonding increases, the absorption band width will increase in parallel with the transition energy.     

Molecular Design of Silicon-Containing Diazenes: Absorbance of E and Z Isomers in the Near-Infrared Region

The effective use of photochromic systems based on azo compounds in a number of applications, especially biomedical and pharmacological ones, is impeded by the unresolved problem of their E⇆Z isomerization in the near-IR region, NIR (780–1400 nm). We have demonstrated at the TD-DFT, STEOM-DLPNO-CCSD and CASSCF-NEVPT2 levels of theory that the presence of a silylated diazene core −Si−N=N−Si− with three-, tetra- or five-coordinated silicon atoms practically guarantees the absorption of the E and Z forms of such derivatives in NIR and the amazing (185–400 nm) separation of their first absorption bands. In particular, the maximum λ₁ of the first n→π* band of the E isomer of azosilabenzene ASiB is at ∼1030 nm, while for the Z isomer λ₁≅1340 nm. Based on the found bistable azo compounds ( ASiB , bis(silyl)- SiD and bis(silatranyl)- SaD diazenes) and their derivatives with E and Z absorption in NIR, unique photoswitches can be created for a number of applications, in particular, for photothermal therapy.     

A blue-green-emitting 3D supramolecular compound: synthesis,crystal structure and effect of solvents and temperature on the luminescent properties

A blue-green-emitting three-dimensional supramolecular compound (C₁₀O₂N₂H₈)(C₉O₇H₆) (1) was synthesised under hydrothermal conditions and structurally characterised by elemental analysis, IR spectrum, ¹H NMR and single-crystal X-ray diffraction. The crystal belongs to triclinic system with P 1¯ space group. The crystal structure is stabilised by O–H…O, O–H…N hydrogen bonds and π–π interactions (π–π stacking distance is 3.282 Å). Compound 1 exhibits intense green luminescence in solid state at 298 K (λ_em = 546 nm). In addition, absorption and fluorescence characteristics of compound 1 have been investigated in different solvents (DMSO, CH₃CN and CH₃OH). The results show that compound 1 exhibits a large red shift in both absorption and emission spectra as solvent polarity increases (polarity: DMSO>CH₃CN>CH₃OH), indicating a change in dipole moment of compound 1 upon excitation. Although the emission spectra of compound 1 in CH₃OH are close to it in dimethyl sulfoxide (DMSO), it is revealed that the luminescence behaviour of compound 1 depends not only on the polarity of environment but also on the hydrogen bonding properties of the solvent. Meanwhile, temperature strongly affects the emission spectra of compound 1. Emission peaks of compound 1 were blue shift at 77 K than those at 298 K in both solid state (ca. 142 nm) and solution (ca. 6–23 nm), which was due to the non-radiative transition decreases at low temperature. Moreover, the quantum yield and fluorescence lifetime of compound 1 were also measured, which increased with increasing polarity of solvent, lifetime in DMSO at 298 K (τ₁ = 0.92 μs, τ₂ = 8.71 μs) was the longest one in solvents (298 K: τ₁ = 0.87–0.92 μs, τ₂ = 7.50–8.71 μs; 77 K: τ₁ = 0.72–0.90 μs, τ₂ = 6.88–7.45 μs), which was also shorter than that in solid state (298 K: τ₁ = 1.13 μs, τ₂ = 7.50 μs; 77 K: τ₁ = 0.97 μs, τ₂ = 8.97 μs). This was probably because of the weak polarity environment of compound 1 in solid state.     

Isobaric thermoanalytical study of the decomposition process of interstitial graphite-Iron(III) chloride compounds

First-step and second-step interstitial graphite-FeCl₃ compounds were studied by isobaric thermal analysis in the temperature interval of 298 ... 750 K and pressure interval of 10 ... 700 Torr. ΔH ⁰ and ΔS ⁰ values were obtained for the processes C₆FeCI₃ → 0.5 C₁₂FeCI₃ + 0.5 FeCl₃(s) C₆FeCl₃ → 6C + FeCl₃(s) and C₁₂FeCl₃ → 12 C + FeCl₃(s) It was demonstrated that the thermal decomposition process of the interstitial graphite compounds investigated proceeds in stages. Temperature dependence of the heat capacity of the studied compounds was determined in the temperature interval of 298 ... 570 K.     

Estimation of rate constants as a function of temperature for the reactions W + XYZ = WX + YZ,where W,X, Y,and Z are H or O atoms

Rate constants have been estimated as a function of temperature for seven reactions of the type W + XYZ = WX + YZ, where W, X, Y, and Z are H and O atoms. From transition state theory and estimates of the heat capacities of activation, where int k is the rate constant per transferable atom for the forward and reverse reactions in the exothermic direction, and where ΔH°_≠298 is in kcal/mol. Values of ΔS°_≠298 and ΔH°_≠298 were obtained from the above equation and previously measured and evaluated rate constants at 298°K. The results are summarized in a table. Rate constants were calculated at temperature from 250 to 2000 K. The estimated rate constants were compared with recommended values. The results for ΔH°_≠298 for reactions (15), (16), (17), and (19), in which a stable intermediate may precede the transition state, together with similar results previously found for reactions X + YZ = XY + Z, suggests that many such reactions may have values of ΔH°_≠298 that are close to zero. The result for the reaction O + O₃ = O₂ + O₂ is however, an exception to the foregoing perhaps because it is the reaction of a singlet with a triplet.ΔS°_≠298 for the same reaction is unexpectedly low.     

Synthesis,photophysical properties and DFT studies of 2-(3-cyano-4-((2-(4,6-dimethyl-5-nitro-1H-pyrazolo[3,4-b]pyridin-3-yl)hydrazono)methyl)-5,5-dimethylfuran-2(5H)-ylidene)malononitrile dye

The chromophore 2-(3-cyano-4-((2-(4,6-dimethyl-5-nitro-1H-pyrazolo[3,4-b]pyridin-3-yl) hydrazono)methyl)-5,5-dimethylfuran-2(5H)-ylidene)malononitrile (PPHTCF) was synthesized through coupling of diazotized 3-amino-4,6-dimethyl-5-nitropyrazolo[3,4-b]pyridine with 3-cyano-2-(dicyanomethylene)-4,5,5-trimethylfuran (TCF). The absorption solvatochromism behaviour of PPHTCF, in various solvents, presented ΔE_max = +5.40 where the positive sign suggested red shift occurrence, implying that the PPHTCF has more polar lowest excited state than its ground one. While, the PPHTCF fluorescence spectra afforded λ_em, in 575–633 nm range, and was more dependent on the solvent polarity than the absorption λ^max, despite both exhibited red shift by 58 and 42 nm, respectively. To discover the PPHTCF solvatochromism behaviour in term of “Stokes’ shift”, both of Lippert-Mataga and linear solvation-energy relationship (LSER) formulations have been utilized and the outcomes endorsed that the later was better than the former (R² = 0.9728). Finally, TD-DFT simulated absorption and emission spectra in EtOH revealed that λ^max has been resulted mainly from HOMO → LUMO; HOMO-5 → LUMO and HOMO-2 → LUMO transitions, respectively.     

Characterization of Diastereomeric Equilibria of Pseudotetrahedral Bis[(R or S)-N-1-(Ar)Ethylsalicylaldiminato-κ2N,O]zinc(II) with Λ/Δ-Chirality-At-Metal Induction

A family of bis[(R or S)-N-1-(Ar)ethylsalicylaldiminato-κ²N,O]-Δ/Λ-zinc(II) {Ar=C₆H₅ (ZnRL¹ or ZnSL¹), p-CH₃OC₆H₄ (ZnRL² or ZnSL²) and p-ClC₆H₄ (ZnRL³ or ZnSL³)} compounds was synthesized and investigated by multiple methods. They feature Λ/Δ-chirality-at-metal induction along the pseudo-C₂ axis of the molecules. The chirality induction is quantitative in the solid state, explored by X-ray crystallography and powder X-ray diffraction (PXRD), where R or S-ligated complexes diastereoselectively yield Λ or Δ-configuration at the metal. On the other hand, Λ and Δ-diastereomers co-exist in solution. The Λ⇆Δ equilibrium is solvent- and temperature-dependent. Electronic circular dichroism (ECD) spectra confirm the existence of a diastereomeric excess of Λ-ZnRL¹⁻³ or Δ-ZnSL¹⁻³ in solution. DSC analysis reveals thermally induced irreversible phase transformation from a crystalline solid to an isotropic liquid phase. ECD spectra were reproduced by DFT geometry optimizations and time-dependent DFT (TD-DFT) calculations, providing ultimate proof of the dominant chirality atmetal in solution.     

THE EFFECT OF ACCEPTOR GROUP VARIATION ON THE SOLVATOCHROMISM OF DONOR-ACCEPTOR FLUOROPHORES

Abstract The absorption and emission characteristics of five hydroxytetrahydrochrysenes substituted with acceptor groups (nitro, cyano, methylketone, 1° amide and methyl ester) (THC-NO₂, THC-CN, THC-COCH₃, THC-CONH₂ and THC-CO₂CH₃, respectively) were investigated in an extensive set of solvents. The order of absorption and fluorescence bathochromicity are: THC-NO₂ > THC-COCH₃ > THC-CN ≥ THC-CO₂CH₃ > THC-CONH₂ and THC-NO₂ >> THC-COCH₃ > THC-CO₂CH₃ > THC-CN > THC-CONH₂, respectively. The emission spectra of these compounds are sensitive to the solvent polarity (E_T[30] scale) in the order: THC-NO₂ > THC-COCH₃ > THC-CO₂CH₃ > THC-CONH₂ > THC-CN. The response of the emission maxima of these compounds to the solvent polarity and hydrogen-bond donor/acceptor properties (π*/α/β and acity/basity scales) was also determined. The emission energies of THC-NO₂ were most sensitive to π*, β, acity, and basity of the solvent; those of the amide were least sensitive to the solvent π*, β, and basity. The ground- and excited-state dipole moments were determined by semiempirical molecular orbital calculations and the absorption/fluorescence solvent-shift method, respectively. THC-NO₂ had the largest ground- and excitedstate moments. The ester and amide had the smallest ground- and excited-state moments, respectively. In general, unsatisfactory results were obtained for correlations of the emission and absorption energies, fluorescence solvatochromism and the ground- and excited-state dipole moments with the Hammett substituent constants of the five acceptor groups. Acceptable correlations were obtained for the absorption and emission energies and the fluorescence solvatochromism with the substituent constants if the cyano compound was excluded.     

Structural and spectral properties of 3-substitutedphenyl-1,5-diphenylformazans: A quantum chemical study

The structural and optical properties of 3-substitutedphenyl-1,5-diphenylformazans are studied by quantum chemical methods. The density functional theory (DFT) is employed to optimize the ground state geometries of formazans substituted with different electron donating and withdrawing groups in both gas and solvent phases. The absorption spectra of formazan derivatives are calculated using time dependent density functional theory (TD-DFT). The polarizable continuum model (PCM) calculations of 3-substitutedphenyl-1,5-diphenylformazans are performed for bulk solvent effects. The geometrical parameters, vibrational frequencies, and relative stabilities of isomers of 3-substitutedphenyl-1,5-diphenylformazans are studied. The results obtained by TD-DFT calculations reveal that the substitution of electron withdrawing and donating substituents affects the absorption spectra of 3-substitutedphenyl-1,5-diphenylformazans. The calculated maximum absorption wavelengths (λ_max) are highly consistent with the experimental values as found from UV-vis spectra.     

Synthesis,spectral, DFT calculations and biological studies of solvatochromic copper(II)-ONS hydrazone derived from 2-aminochromone-3-carboxaldehyde

New ONS hydrazone ligand, 2-[(2-aminochromon-3-yl)methylidene]-N-phenylhydrazinecarbothioamide, HL , was synthesized and reacted with different salts of Cu (II) ion (OAc⁻, NO₃⁻, SO₄²⁻ and Cl⁻) in absence and presence of secondary ligands (L′); 8-hydroxyquinoline, 1,10-phenanthroline or SCN⁻; to form binary and ternary Cu(II)-chelates. The ligand and its Cu(II)-complexes were fully characterized by analytical, spectral, thermal, conductivity and magnetic susceptibility measurements. The metal chelates showed octahedral, square planar and /or distorted tetraherdal arrangements. Coats–Redfern equations used to calculate the kinetic parameters of the thermal decomposition stages (E_a, A, ΔH, ΔS and ΔG). The compounds exhibit luminescence property; promising interesting potential applications as photoactive materials. Lippert–Mataga, Bakhshiev, Kawski–Chamma–Viallet and microscopic solvent polarity parameter and E_T^N correlation methods were applied on the solvatochromic shifts of emission spectra to evaluate the ground (μ_g) and excited (μ_e) states dipole moments. Excited state dipole moment is larger than the ground state which may be attributed to π-π* transition. The coordinating anions play an important role on the position and intensity of emission band. The ligand and its metal complexes showed antimicrobial activity towards Gram–positive bacteria, Gram–negative bacteria, yeast and fungus. The molecular structural parameters of HL and its Cu(II)- complexes have been calculated on the basis of DFT engaged in the Gaussian 09 program at the B3LYP/6-31G(d,p) level; the theoretical data are correlated with the experimental data.     

7-吡啶吲哚同分异体结构与电子光谱性质的理论研究

运用密度泛函理论对7-吡啶吲哚可能存在的构型进行优化,计算异构体的几何构型、电子结构、前线分子轨道;应用含时密度泛函理论计算了异构体b,c和e的电子光谱性质以及溶剂效应对光谱性质的影响.结果表明,溶剂极性的增加使b的电子光谱蓝移,而c和e的电子光谱红移,且溶剂极性对最大吸收波长影响幅度较小.前线分子轨道分析,表明该类化合物的主要吸收光谱主要对应于分子中的HOMO→LUMO电子跃迁,且为π→π*跃迁.     

Solvent,ligand, pressure,and temperature effects on charge-transfer spectra of tetracarbonylmolybdenum(0) diimine complexes

Summary The solvent, pressure, and temperature-dependence of the lowest energy metal-to-ligand charge-transfer absorption bands are reported for a series of [Mo(CO)₄(LL)], compounds where LL is a bidentate diimine ligand containing the chelating fragment –N=CRCR=N–, and one terdentate ligand analogue [Mo(CO)₃(LLL)]. The effects of ligand nature on these dependences are discussed, as are their interrelations and their connection with solvent properties such as polarity.     

Rationalizing the self‐assembly of poly‐(3‐hexylthiophene) using solubility and solvatochromic parameters

The assembly of poly(3‐hextylthiophene) (P3HT) in solvent mixtures is studied using solubility and solvatochromic parameters. Correlations between the excitonic coupling of P3HT assemblies and the Kamlet–Taft (α, β, π*) and solvent scales reveal that lower excitonic coupling values are observed in binary mixtures characterized by low β values (0 < β ≤ 0.25) and low polarity (0.1 ≤ ≤ 0.3). Hansen solubility theory is revisited by evaluating the directionality of the solubility distance, R_a. Relationships between the excitonic coupling and the Δδ_h and Δδ_p vector components indicate that the polarity of the solvent (Δδ_p) and the specific solvent‐solvent interactions reflected by the Δδ_h component direct the formation of well‐ordered P3HT aggregates. The complementary results of the solubility and solvatochromic parameter analyses are in agreement with one another. © 2015 Wiley Periodicals, Inc. J. Polym. Sci., Part B: Polym. Phys. 2015 , 53, 841–850     

Optimization of binary solvents in thin layer chromatography

ΔR_f, the separation between a pair of compounds on a thin layer chromatographic plate, can be predicted as a function of solvent composition for certain binary systems. This allows the prediction of optimum solvent composition for separating a mixture of compounds by thin layer chromatography. A new solvent polarity ranking, based on calculation of ΔR_f is described.     

Photophysical Properties of Coumarin‐30 Dye in Aprotic and Protic Solvents of Varying Polarities¶

Experimental results on various photophysical properties of coumarin‐30 (C30) dye, namely, Stokes' shift (Δv), fluorescence quantum yield (τ_f), fluorescence lifetime (τ_f), radiative rate constant (k_f) and nonradiative rate constant (k_nr), as obtained using absorption and fluorescence measurements have been reported. Though in most of the solvents the properties of C30 show more or less linear correlation with the solvent polarity function, Δf= [(ε ‐ 1)/(2ε+ 1) ‐ (n² ‐ 1)/ (2n²+ l)], they show unusual deviations in nonpolar solvents at one end and in high‐polarity protic solvents at the other end. From the solvent polarity and temperature effect on the photophysical properties of the dye, following inferences have been drawn: ( 1 ) in nonpolar solvents, the dye exists in a nonpolar structure, where its 7‐NEt₂ substituent adopts a pyramidal configuration and the amino lone pair is out of resonance with the benzopyrone π cloud; ( 2 ) in medium to higher polarity solvents, the dye exists in a polar intra‐molecular charge transfer structure, where the 7‐NEt₂ group and the 1,2‐benzopyrone moiety are in the same plane and the amino lone pair is in resonance with the benzopyrone π cloud; ( 3 ) in protic solvents, the dye‐solvent intermolecular hydrogen bonding influences the photophysical properties of the dye; and ( 4 ) in high‐polarity protic solvents, the excited C30 undergoes a new activation‐controlled nonradiative deexcitation process because of the involvement of a twisted intra‐molecular charge transfer (TICT) state. Contrary to most other TICT molecules, the activation barrier for this deexcitation process in C30 is observed to increase with solvent polarity. A rational for this unusual behavior has been given on the basis of the solvent polarity‐dependent stabilization and crossing of relevant electronic states and the relative propensity of interconversion among these states.     

The standard thermodynamic properties of 4<Emphasis Type="Italic">f</Emphasis> metal trichlorides

The enthalpies of sublimation Δ_sub H ⁰(298) of 4f metal trichlorides were calculated by the second and third laws of thermodynamics from saturated vapor pressures using the thermodynamic functions of the condensed and gaseous states suggested by us. The set of the Δ_sub H ^o(298) enthalpies was analyzed to determine the most reliable values. The enthalpies of atomization found from these values were compared with those calculated from the measured equilibrium constants of gas phase reactions with the participation of the compounds under consideration and the enthalpies of atomization found from the experimental appearance potentials AP(Ln⁺/LnCl₃). Recommended Δ_at H ^o(298) values were obtained for all the 4f metal trichlorides.     

Beiträge zur Chemie der Oxidhalogenide von Molybdän und Wolfram. IX. Bildungsenthalpie und Sättigungsdruck des MoOBr3

From the enthalpy of solution of MoOBr₃ in NaOH/H₂O₂ the enthalpy of formation ΔH°(MoOBr₃,f,298) = ?109,5(±0,4) kcal/mol was derived. The sublimation of MoOBr₃ is connected with simultaneous decomposition (see “Inhaltsübersicht”). From the temperature function of the saturated vapor pressure the values ΔH°(subl., MoOBr₃, 298) = 36(±1,5) kcal/mol and ΔS°(subl., MoOBr₃, 298) = 56(±3) cl are calculated.