Tandem radical and non-radical reactions mediated with thiols--a new method of cleavage of allylic amines

Thiyl radical promotes the isomerisation of allylic amines into enamines via two consecutive hydrogen atom abstraction steps, and the subsequent polar addition of the corresponding thiol to the enamine results in the cleavage of the C-N bond via a thioaminal intermediate: this reaction provides a mild, metal-free methodology for the deprotection of allylated primary and secondary amines.     

Highly efficient photochemically induced thiyl radical-mediated racemization of aliphatic amines at 30 degrees C

UV irradiation in the presence of thiol enables the performance of highly efficient aliphatic amines racemization, under mild conditions at 30 degrees C. The reaction proceeds via the reversible generation of prochiral alpha-aminoalkyl radicals. The latter may result either from a redox process between the thiyl radical and the amine or from direct hydrogen atom abstraction by thiyl radical. As hydrogen atom donor, the thiol plays a crucial role. While the racemization of both primary and secondary amines were fast processes, the racemization of tertiary amines was sluggish. A tentative rationale is based on the photostimulated amine-catalyzed oxidation of the thiol into the corresponding disulfide, which makes the hydrogen atom donor concentration in the reaction medium drop up to trace amount at a rate that depends on the nature of the amine.     

Thiyl radical mediated racemization of nonactivated aliphatic amines

The racemization of nonactivated aliphatic amines has been mediated with alkanethiols and with methyl thioglycolate in the presence of AIBN. The process involves reversible H-abstraction at the chiral center, in a position alpha relative to nitrogen, by thiyl radical. The knowledge of the reaction enthalpy is critical to select the appropriate thiol. In the absence of experimental values, theoretical calculations of the alpha-C-H BDEs and the S-H BDE provide a useful guide.     

Charge Separation in Metal-Organic Framework Enables Heterogeneous Thiol Catalysis

Photoinduced metal–organic framework (MOF) enabled heterogeneous thiol catalysis has been achieved for the first time. MOF Zr-TPDCS-1 , consisting of Zr₆-clusters and TPDCS linkers (TPDCS=3,3′′,5,5′′-tetramercapto[1,1′:4′,1′′-terphenyl]-4,4′′-dicarboxylate), effectively catalyzed the borylation, silylation, phosphorylation, and thiolation of organic molecules. Upon irradiation, the fast electron transfer from TPDCS to Zr₆-cluster is believed to facilitate the formation of the thiyl radical, a hydrogen atom transfer catalyst, which competently abstracts the hydrogen from borane, silane, phosphine, or thiol for generating the corresponding element radical to engender the chemical transformations. The elaborate control experiments evidenced the generation of thiyl radicals in MOF and illustrated a radical reaction pathway. The gram-scale reaction worked well, and the product was conveniently separated via centrifugation and vacuum with a turnover number (TON) of ≈3880, highlighting the practical application potential of heterogeneous thiyl-radical catalysis.     

Copper-catalyzed oxaziridine-mediated oxidation of C-h bonds

The highly regio- and chemoselective oxidation of activated C-H bonds has been observed via copper-catalyzed reactions of oxaziridines. The oxidation proceeded with a variety of substrates, primarily comprising allylic and benzylic examples, as well as one example of an otherwise unactivated tertiary C-H bond. The mechanism of the reaction is proposed to involve single-electron transfer to the oxaziridines to generate a copper-bound radical anion, followed by hydrogen atom abstraction and collapse to products, with regeneration of the catalyst by a final single-electron transfer event. The involvement of allylic radical intermediates was supported by a radical-trapping experiment with TEMPO.     

Intramolecular hydrogen bonding and hydrogen atom abstraction in gas-phase aliphatic amine radical cations

The intramolecular hydrogen atom abstraction by the nitrogen atom in isolated aliphatic amine radical cations is examined experimentally and with composite high-level ab initio methods of the G3 family. The magnitude of the enthalpy barriers toward H-atom transfer varies with the shape and size of the cyclic transition state and with the degree of substitution at the nitrogen and carbon atoms involved. The lower barriers are found for 1,5- and 1,6-abstraction, for chairlike transition states, for abstraction reactions in ionized primary amines, and for abstraction of H from tertiary carbon atoms. In most cases, the internal energy required for 1,4-, 1,5-, and 1,6-hydrogen atom abstraction to occur is less than that required for gas-phase fragmentation by simple cleavage of C-C bonds, which explains why H-atom transfer can be reversible and result in extensive H/D exchange prior to the fragmentation of many low-energy deuterium labeled ionized amines. The H-atom transfer to nitrogen is exothermic for primary amine radical cations and endothermic for tertiary amines. It gives rise to a variety of distonic radical cations, and these may undergo further isomerization. The heat of formation of the gauche conformers of the gamma-, delta-, and epsilon-distonic isomers is up to 25 kJ mol(-1) lower than that of the corresponding trans forms, which is taken to reflect C-H-N hydrogen bonding between the protonated amino group and the alkyl radical site.     

Mechanistic investigations on the reaction between amines or amides and an alkylperoxy-lambda3-iodane

A mechanism involving the intermediate formation of an amine radical cation by single-electron transfer is proposed for the oxidation of secondary amines with alkylperoxy-lambda(3)-iodane. On the other hand, the oxidation of acetamides probably proceeds by a radical process, which involves the direct hydrogen abstraction of the methylene group alpha to the nitrogen atom.     

A computational study of remote C-H activation by amine radical cations: implications for the photochemical reduction of carbon dioxide

A computational study, using density functional theory calibrated against higher-level methods, has been undertaken to evaluate tertiary amines whose radical cations might lose hydrogen atoms from positions other than the alpha carbons. The purpose was to find photochemically activated reducing agents for carbon dioxide that could be regenerated in a separate photochemical reaction. The calculations have revealed two reactions that might be suitable for this purpose. In one, the nitrogen of the radical cation makes a bond to a remote carbon with simultaneous displacement of a hydrogen atom. In the other, a remote hydrogen atom is transferred to the nitrogen, thereby creating a distonic radical cation that can lose a hydrogen atom beta to the radical site. The latter reaction is found to be particularly favorable since it apparently involves a surface crossing that allows the amine radical cation and CO2 radical anion to transform smoothly to a ground-state formate ion and an alkene. A number of structural motifs are investigated for the amines. The lower ionization potential of aromatic amines, compared to their aliphatic analogues, is desirable in that it could permit the use of longer wavelength light to drive the reaction. However, a thermochemical cycle shows that the reduction in ionization potential must be matched by an increase in proton affinity of the amine if the intramolecular hydrogen transfer is to be exothermic. Most aromatic amines do not satisfy this criterion and, hence, would have to rely on the displacement reaction for hydrogen-atom release if they were to be used as renewable reagents for CO2 reduction. Examples of specific aromatic and aliphatic tertiary amines that should be suitable for the purpose are presented, and their relative merits and weaknesses are discussed.     

MPW1K Performs Much Better than B3LYP in DFT Calculations on Reactions that Proceed by Proton-Coupled Electron Transfer (PCET)

DFT calculations have been performed with the B3LYP and MPW1K functional on the hydrogen atom abstraction reactions of ethenoxyl with ethenol and of phenoxyl with both phenol and alpha-naphthol. Comparison with the results of G3 calculations shows that B3LYP seriously underestimates the barrier heights for the reaction of ethenoxyl with ethenol by both proton-coupled electron transfer (PCET) and hydrogen atom transfer (HAT) mechanisms. The MPW1K functional also underestimates the barrier heights, but by much less than B3LYP. Similarly, comparison with the results of experiments on the reaction of phenoxyl radical with alpha-naphthol indicates that the barrier height for the preferred PCET mechanism is calculated more accurately by MPW1K than by B3LYP. These findings indicate that the MPW1K functional is much better suited than B3LYP for calculations on hydrogen abstraction reactions by both HAT and PCET mechanisms.     

FURTHER STUDIES ON THE CRYSTAL-VIOLET-SENSITIZED PHOTOOXIDATION OF CYSTEINE TO CYSTEIC ACID

Abstract —Crystal violet sensitizes the selective photooxidation of cysteine to cysteic acid; hydrogen peroxide is also formed as an end product. The participation of singlet oxygen in the photoreaction has been ruled out, since exposure of cysteine to this reagent, generated by chemical or photochemical processes, gives only cystine as a product. The photoreaction is inhibited by radical scavengers such as hydroquinone and allylic alcohol. A mechanism is proposed involving hydrogen abstraction by the triplet dye from the thiol group of cysteine.     

Alkali‐Metal‐Ion‐Assisted Hydrogen Atom Transfer in the Homocysteine Radical

Intramolecular hydrogen atom transfer (HAT) was examined in homocysteine (Hcy) thiyl radical/alkali metal ion complexes in the gas phase by combination of experimental techniques (ion‐molecule reactions and infrared multiple photon dissociation spectroscopy) and theoretical calculations. The experimental results unequivocally show that metal ion complexation (as opposed to protonation) of the regiospecifically generated Hcy thiyl radical promotes its rapid isomerisation into an α‐carbon radical via HAT. Theoretical calculations were employed to calculate the most probable HAT pathway and found that in alkali metal ion complexes the activation barrier is significantly lower, in full agreement with the experimental data. This is, to our knowledge, the first example of a gas‐phase thiyl radical thermal rearrangement into an α‐carbon species within the same amino acid residue and is consistent with the solution phase behaviour of Hcy radical.     

Modified aza-claisen rearrangement: Generation and isomerization of allyl enammonium salts

Base-promoted reaction of ketones and diethyl (diazomethyl)phosphonate in the presence of allylic amines affords allylic enamines in good yields. These enamines undergo [3,3]-sigmatropic rearrangement upon alkylation and heating at 80°C to iminium salts which can be hydrolysed to aldehydes. The procedure allows generation of quaternary carbon centers under mild reaction conditions.     

Reversible intramolecular hydrogen transfer between cysteine thiyl radicals and glycine and alanine in model peptides: absolute rate constants derived from pulse radiolysis and laser flash photolysis

The intramolecular reaction of cysteine thiyl radicals with peptide and protein alphaC-H bonds represents a potential mechanism for irreversible protein oxidation. Here, we have measured absolute rate constants for these reversible hydrogen transfer reactions by means of pulse radiolysis and laser flash photolysis of model peptides. For N-Ac-CysGly6 and N-Ac-CysGly2AspGly3, Cys thiyl radicals abstract hydrogen atoms from Gly with k(f) = (1.0-1.1 x 10(5) s(-1), generating carbon-centered radicals, while the reverse reaction proceeds with k(r) = (8.0-8.9) x 10(5) s(-1). The forward reaction shows a normal kinetic isotope effect of k(H)/k(D) = 6.9, while the reverse reaction shows a significantly higher normal kinetic isotope effect of 17.6, suggesting a contribution of tunneling. For N-Ac-CysAla2AspAla3, cysteine thiyl radicals abstract hydrogen atoms from Ala with k(f) = (0.9-1.0) x 10(4) s(-1), while the reverse reaction proceeds with k(r) = 1.0 x 10(5) s(-1). The order of reactivity, Gly > Ala, is in accord with previous studies on intermolecular reactions of thiyl radicals with these amino acids. The fact that k(f) < k(r) suggests some secondary structure of the model peptides, which prevents the adoption of extended conformations, for which calculations of homolytic bond dissociation energies would have predicted k(f) > k(r). Despite k(f) < k(r), model calculations show that intramolecular hydrogen abstraction by Cys thiyl radicals can lead to significant oxidation of other amino acids in the presence of physiologic oxygen concentrations.     

The influence of hydrogen bonding interactions on the C-H bond activation step in class I ribonucleotide reductases

In order to model the C-H bond activation step in ribonucleotide reductases the hydrogen atom abstraction reaction from cis-tetrahydrofuran-2,3-diol (7) by methylthiyl (8) radical has been studied with theoretical methods. In order to identify an appropriate theoretical method for this system, the hydrogen transfer reaction between radical 8 and methanol (9) to give methanol radical (10) and methyl thiol (11) has been studied at several different levels of theory. While the reaction energy for this process is predicted equally well by the Becke3LYP and BH and HLYP hybrid functional methods, the reaction barrier is predicted to be significantly lower by the former. Compared to results obtained at CCSD(T)/cc-pVTZ level the BH and HLYP functional is better suited for the calculation of activation barriers for hydrogen abstraction reactions. This latter method was subsequently used to study the reaction of radical 8 with cis-tetrahydrofuran-2,3-diol 7 in the absence and in the presence of additional functional groups (acetate and acetamide) as models for the substrate reaction of class I ribonucleotide reductases (RNRs). The reaction barrier is lowest in those systems, in which acetate forms a double hydrogen bonded complex with the hydroxy groups of diol 7 (+8.2 kcal mol-1) and increases somewhat for side-on complexes between substrate 7 and acetate featuring only one hydrogen bond (+10.5 kcal mol-1). The barrier reduction of 6.5 kcal mol-1 obtained through complexation of diol 7 with acetate appears to be due to the formation of short strong hydrogen bonds in the transition. These effects can also be found in reactions of thiyl radical 8 with complexes of diol 7 with acetamide, but to a much smaller extent. The lowest reaction barrier is in this case calculated for the side-on complex (+11.2 kcal mol-1), while the bridging orientation between diol 7 and acetamide leads to a reaction barrier (+13.4) that is only slightly lower than that for the uncatalyzed process (+14.7 kcal mol-1). With respect to the structure of the active site of the RNR R1 subunit, only the side-on complexes appear to be relevant for the enzyme-catalyzed process. Under this condition the influence of the E441 side chan and thus the impact of the E441Q mutation in the initial C-H bond activation step will be rather small.     

Skewered reactions in free‐radical crosslinking (co)polymerizations of liquid polybutadiene as internal olefinic multivinyl crosslinker

As an extension of our continuing studies concerned with the mechanistic discussion of network formation in the free‐radical crosslinking (co)polymerization of multivinyl monomers, this work refers to the skewered reactions in the crosslinking (co)polymerizations of liquid polybutadiene rubber (LBR) as an internal olefinic multivinyl monomer or crosslinker, especially focused on the competitive occurrence of both addition or skewered reaction to internal carbon–carbon (CC) double bonds and abstraction reaction of allylic hydrogens in LBR by growing polymer radical. Thus, LBR is regarded as an internal olefinic multiallyl monomer‐linked allyl groups (? CH?CH? CH₂? ) with methylene units (? CH₂? ). First, gelation in the polymerization of LBR was explored in detail, especially at elevated temperatures. The occurrence of intermolecular crosslinking was easier in the order LBR > LBR containing 20 mol % of 1,2‐structural units > liquid polyisoprene rubber. Then, we pursued the polymerization of LBR using dicumyl peroxide (DCPO) as typical organic peroxide used at elevated temperatures. The primary cumyloxy radical generated by the thermal decomposition of DCPO may add to CC double bond or abstract allylic hydrogen or undergo β‐scission to generate a secondary methyl radical. The initiation by the cumyloxy radical was omitted. The ratio of allylic hydrogen abstraction to β‐scission reaction was estimated; thus, only 39% of cumyloxy radical was used for the allylic hydrogen abstraction reaction. The addition of methyl radical to CC double bond was clearly observed. Finally, we pursued the intermolecular and intramolecular skewered reactions in free‐radical crosslinking LBR/vinyl pivalate copolymerizations. © 2011 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2012     

Forging C−S Bonds on the Azetidine Ring by Continuous Flow Photochemical Addition of Thiols and Disulfides to Azetines

A strategy for anti-Markovnikov hydroalkyl/aryl thiolation and disulfidation of 2-azetines under continuous flow conditions has been developed. Thiyl radicals are generated from thiols or disulfides and subsequently propagate into the azetine unsaturation to forge the C−S bond and shape a secondary radical intermediate. This carbon-centered radical chain transfers to another thiol via hydrogen atom transfer (HAT) or another disulfide to regenerate the key thiyl radical intermediates. The use of flow technology ensures efficient irradiation of the reaction mixture leading to extremely fast, robust, and scalable protocols. Furthermore, ethyl acetate was adopted as an environmentally responsible solvent.     

On the Synthesis,Characterization and Reactivity of N‐Heteroaryl–Boryl Radicals,a New Radical Class Based on Five‐Membered Ring Ligands

The synthesis and physical characterization of a new class of N‐heterocycle–boryl radicals is presented, based on five membered ring ligands with a N(sp²) complexation site. These pyrazole–boranes and pyrazaboles exhibit a low bond dissociation energy (BDE; B?H) and accordingly excellent hydrogen transfer properties. Most importantly, a high modulation of the BDE(B?H) by the fine tuning of the N‐heterocyclic ligand was obtained in this series and could be correlated with the spin density on the boron atom of the corresponding radical. The reactivity of the latter for small molecule chemistry has been studied through the determination of several reaction rate constants corresponding to addition to alkenes and alkynes, addition to O₂, oxidation by iodonium salts and halogen abstraction from alkyl halides. Two selected applications of N‐heterocycle–boryl radicals are also proposed herein, for radical polymerization and for radical dehalogenation reactions.     

Mechanism of the diphenyldisulfone-catalyzed isomerization of alkenes. Origin of the chemoselectivity: experimental and quantum chemistry studies

Polysulfone- and diphenyldisulfone-catalyzed alkene isomerizations are much faster for 2-alkyl-1-alkenes than for linear, terminal alkenes. The mechanism of these reactions has been investigated experimentally for the isomerization of methylidenecyclopentane into 1-methylcyclopentene, and theoretically [CCSD(T)/6-311++G(d,p)//B3LYP/6-311++G(d,p) calculations] for the reactions of propene and 2-methylpropene with a methanesulfonyl radical, MeSO2*. On heating, polysulfones and (PhSO2)2 equilibrate with sulfonyl radicals, RSO2*. The latter abstract allylic hydrogen atoms in one-step processes giving allylic radical/RSO2H pairs that recombine within the solvent cage producing the corresponding isomerized alkene and RSO2*. The sulfinic acid, RSO2H, can diffuse out from the solvent cage (H/D exchange with MeOD,D2O) and reduce an allyl radical. Calculations did not support other possible mechanisms such as hydrogen exchange between alkenes, electron transfer, or addition/elimination process. Kinetic deuterium isotopic effects measured for the (PhSO2)2-catalyzed isomerization of methylidenecyclopentane and deuterated analogues and calculated for the H abstraction from 2-methylpropene and deuterated analogues by CH3SO2* are consistent also with the one-step hydrogen transfer mechanism. The high chemoselectivity for this reaction is not governed by an exothermicity difference but by a difference in ionization energies of the alkenes. Calculations for CH3SO2* + propene and CH3SO2* + 2-methylpropene show a charge transfer of 0.34 and 0.38 electron, respectively, from the alkenes to the sulfonyl radical in the transition states of these hydrogen abstractions.     

Mechanism of the hydrogen transfer from the OH group to oxygen-centered radicals: proton-coupled electron-transfer versus radical hydrogen abstraction

High-level ab initio electronic structure calculations have been carried out with respect to the intermolecular hydrogen-transfer reaction HCOOH+.OH-->HCOO.+H(2)O and the intramolecular hydrogen-transfer reaction .OOCH2OH-->HOOCH(2)O.. In both cases we found that the hydrogen atom transfer can take place via two different transition structures. The lowest energy transition structure involves a proton transfer coupled to an electron transfer from the ROH species to the radical, whereas the higher energy transition structure corresponds to the conventional radical hydrogen atom abstraction. An analysis of the atomic spin population, computed within the framework of the topological theory of atoms in molecules, suggests that the triplet repulsion between the unpaired electrons located on the oxygen atoms that undergo hydrogen exchange must be much higher in the transition structure for the radical hydrogen abstraction than that for the proton-coupled electron-transfer mechanism. It is suggested that, in the gas phase, hydrogen atom transfer from the OH group to oxygen-centered radicals occurs by the proton-coupled electron-transfer mechanism when this pathway is accessible.     

A Strategy for Controlling the Polymerizations of Thiyl Radical Propagation by RAFT Agents

The ability to extend the polymerizations of thiyl radical propagation to be regulated by existing controlled methods would be highly desirable, yet remained very challenging to achieve because the thiyl radicals still cannot be reversibly controlled by these methods. In this article, we reported a novel strategy that could enable the radical ring-opening polymerization of macrocyclic allylic sulfides, wherein propagating specie is thiyl radical, to be controlled by reversible addition–fragmentation chain transfer (RAFT) agents. The key to the success of this strategy is the propagating thiyl radical can undergo desulfurization with isocyanide and generate a stabilized alkyl radical for reversible control. Systematic optimization of the reaction conditions allowed good control over the polymerization, leading to the formation of polymers with well-defined architectures, exemplified by the radical block copolymerization of macrocyclic allylic sulfides and vinyl monomers and the incorporation of sequence-defined segments into the polymer backbone. This work represents a significant step toward directly enabling the polymerizations of heteroatom-centered radical propagation to be regulated by existing reversible-deactivation radical polymerization techniques.