Conformational and configurational analysis of an N,N carbonyl dipyrrinone-derived oximate and nitrone by NMR and quantum chemical calculations

The geometries and relative energies of new N,N carbonyl dipyrrinone-derived oxime molecules (E/Z-s-cis 4a and E/Z-s-cis 4b) have been investigated. The calculated energies, molecular geometries, and (1) H/(13) C NMR chemical shifts agree with experimental data, and the results are presented herein. The E-s-cis conformations of 4a and 4b and the Z-s-cis conformation of 5b were found to be the thermodynamically most stable isomers with the oxime hydrogen atom or the methyl functional group adopting an anti-orientation with respect to the dipyrrinone group. This conformation was unambiguously supported by a number of 2D NMR experiments.     

Pyrrole β-amides: Synthesis and characterization of a dipyrrinone carboxylic acid and an N-Confused fluorescent dipyrrinone

Pyrrole β-amides are useful building blocks for the preparation of novel molecular architectures that can be used in supramolecular chemistry and sensor development. Under basic conditions, pyrrole β-amides with an α-aldehyde produce different condensation products when reacted with pyrrolinones depending on the amide substitution. Secondary amides form the expected dipyrrinones, but unexpectedly undergo a subsequent trans-amidation with the pyrrolinone nitrogen to produce an unsymmetrical imide (an N-confused fluorescent dipyrrinone). Under the same conditions, tertiary amides produce the expected dipyrrinone carboxylic acids, which have been shown to have strong self-association properties as determined by vapor pressure osmometry measurements, NMR studies, and X-ray crystal structure determination. Furthermore, an N-confused fluorescent dipyrrinone was produced from the same trans-amidation reaction during attempts to decarboxylate a dipyrrinone amide with a 9-carboxylic moiety.     

Synthesis of a new oxime and its application to the construction of a highly selective and sensitive Co(II) PVC-based membrane sensor.

A cobalt(II) ion-selective membrane sensor has been fabricated from a poly vinyl chloride (PVC) matrix membrane containing a new oxime compound (oxime of 1-(2-oxocyclohexyl)-1,2-cyclohexanediol, OXCCD) as a neutral carrier, sodium tetraphenyl borate (NaTPB) as an anionic excluder and o-nitrophenyloctylether (o-NPOE) as a plasticizing solvent mediator. The membrane sensor exhibits a linear potential response in the concentration range of 1.0 x 10(-1) - 1.0 x 10(-6) M of Co2+. The electrode displays a Nernstian slope of 29.8 mV decade(-1) in the pH range of 3.5 - 8.0. The sensor also exhibits a fast response time of < 25 s. The detection limit of the proposed sensor is 9.0 x 10(-7) M (approximately 40 ng/ml), and it can be used over a period of two months. The selectivity of the sensor with respect to other cations (alkali, alkaline earth, transition and heavy metal ions) is excellent. The practical utility of the sensor has been demonstrated by using it as an indicator electrode in the potentiometric titration of Co2+ with EDTA and for the direct determination of Co(II) in wastewater of the electroplating industry.     

Response Characteristics of Strain Sensors Based on Closely Spaced Nanocluster Films with Controlled Coverage

Flexible strain sensor devices were fabricated by depositing Pd nanoclusters on PET membranes patterned with interdigital electrodes. The sensors responded to the deformation of the PET membranes with the conductance changes of the nanocluster films and were characterized by both high gauge factor and wide detection range. The response characteristics of the strain sensors were found to depend strongly on the nanocluster coverage, which was attributed to the percolative nature of the electron transport in the closely spaced nanocluster arrays. By controlling the nanocluster deposition process, a strain sensor composed of nanocluster arrays with a coverage close to the effective percolation threshold was fabricated. The sensor device showed a linear response with a stable gauge factor of 55 for the applied strains from the lower detection limit up to 0.3%. At higher applied strains, a gauge factor as high as 200 was shown. The nanocluster films also demonstrated the ability to response to large deformations up to 8% applied strain, with an extremely high gauge factor of 3500.     

<Superscript>13</Superscript>C-labeled bilirubin: synthesis of 3<Superscript>1</Superscript>(3<Superscript>2</Superscript>),17<Superscript>1</Superscript>(17<Superscript>2</Superscript>)-di-[<Superscript>13</Superscript>C]-mesobilirubin-XIIIα

Abstract  The title compound, labeled with ¹³C in the ethyl groups was synthesized from K¹³CN and low-molecular-weight components. The synthetic relay compound was 3¹(3²)[¹³C]-xanthobilirubinic acid methyl ester in a synthetic route that leads to a label in the ethyl β-substituent of a dipyrrinone model for bilirubin. This labeled dipyrrinone was oxidatively coupled to the dimethyl ester of mesobiliverdin-XIIIα, thereby providing a route to a ¹³C-labeled mesobiliverdin and mesobilirubin, with one carbon of each ethyl being 98% ¹³C-enriched. Graphical Abstract        

Electroacoustic miniaturized DNA-biosensor

A micrometer-sized electroacoustic DNA-biosensor was developed. The device included a thin semi-crystalline polyethylene terephthalate (PET) dielectric layer with two Ag microband electrodes on one side and a DNA thiol-labeled monolayer adsorbed on a gold surface on the other. A resonance wave was observed at 29 MHz with a network analyzer, upon AC voltage application between the two Ag electrodes, corresponding to electromechanical coupling induced by molecular dipoles of the PET polymer chain in the dielectric layer. It was found that the device size and geometry were well adapted to detect DNA hybridization, by measuring the capacity of the resonance response evolution: hybridization induced polarization of the dielectric material that affected the electromechanical coupling established in the dielectric layer. The 0.2 mm(2) sensor sensitive area allows detection in small volumes and still has higher detection levels for bioanalytical applications, the non-contact configuration adopted avoids electric faradic reactions that may damage biosensor sensitive layers, and finally, PET is a costless raw material, easy to process and well adapted for large scale production. The well-balanced technological and economic advantages of this kind of device make it a good candidate for biochip integration.     

A novel fluorescent chemosensor for Cu(II) in aqueous solution based on a β-aminobisphosphonate receptor

A novel β-aminobisphosphonate receptor has been combined with naphthalene in the fluorophore-spacer-receptor format of a typical photoinduced electron transfer (PET) based sensor. The sensor was synthesised in two steps by first reacting aminomethylnaphthalene with diethyl vinylphosphonate to produce the parent tetraester, followed by deprotection with bromotrimethylsilane to afford the desired sensor. The fluorescence emission of the sensor was observed to remain ‘On’ over a wide pH range (2-10). Cu(II) was found to bind strongly to the sensor resulting in an ‘On-Off’ fluorescent response with sensitivity in the μM range.     

Coumarin‐3‐Aldehyde as a Scaffold for the Design of Tunable PET‐Modulated Fluorescent Sensors for Neurotransmitters

NeuroSensor 521 (NS521) is a fluorescent sensor for primary‐amine neurotransmitters based on a platform that consists of an aryl moiety appended to position C4 of the coumarin‐3‐aldehyde scaffold. We demonstrate that sensors based on this platform behave as a directly linked donor–acceptor system that operates through an intramolecular acceptor‐excited photoinduced electron transfer (a‐PET) mechanism. To evaluate the PET process, a series of benzene‐ and thiophene‐substituted derivatives were prepared and the photophysical properties, binding affinities, and fluorescence responses toward glutamate, norepinephrine, and dopamine were determined. The calculated energy of the highest occupied molecular orbital (E_HOMO) of the pendant aryl substituents, along with oxidation and reduction potential values derived from the calculated molecular orbital energy values of the platform components, allowed for calculation of the fluorescence properties of the benzene sensor series. Interestingly, the thiophene derivatives did not fit the typical PET model, highlighting the limitations of the method. A new sensor, NeuroSensor 539, displayed enhanced photophysical properties aptly suited for biological imaging. NeuroSensor 539 was validated by selectively labeling and imaging norepinephrine in secretory vesicles of live chromaffin cells.     

Chiral donor photoinduced-electron-transfer (d-PET) boronic acid chemosensors for the selective recognition of tartaric acids, disaccharides, and ginsenosides

A modular approach was proposed for the preparation of chiral fluorescent molecular sensors, in which the fluorophore, scaffold, and chirogenic center can be connected by ethynyl groups, and these modules can easily be changed to other structures to optimize the molecular sensing performance of the sensors. This modular strategy to assembly chiral sensors alleviated the previous restrictions of chiral boronic acid sensors, for which the chirogenic center, fluorophore, and scaffold were integrated, thus it was difficult to optimize the molecular structures by chemical modifications. We demonstrated the potential of our new strategy by the preparation of a sensor with a larger scaffold. The photoinduced electron‐transfer (PET) effect is efficient even with a large distance between the N atom and the fluorophore core. Furthermore, the rarely reported donor‐PET (d‐PET) effect, which was previously limited to carbazole, was extended to phenothiazine fluorophore. The contrast ratio, that is, PET efficiency of the new d‐PET sensor, is increased to 8.0, compared to 2.0 with the previous carbazole d‐PET sensors. Furthermore, the ethynylated phenothiazine shows longer excitation wavelength (centered at 380 nm) and emission wavelength (492 nm), a large Stokes shift (142 nm), and high fluorescence quantum yield in aqueous solution (Φ=0.48 in MeOH/water, 3:1 v/v). Enantioselective recognition of tartaric acid was achieved with the new d‐PET boronic acid sensors. The enantioselectivity is up to 10 (ratio of the binding constants toward D ‐ and L ‐tartaric acid, k_D/k_L). A consecutive fluorescence enhancement/decrease was observed, thus we propose a transition of the binding stoichiometry from 1:1 to 1:2 as the analyte concentration increases, which is supported by mass spectra analysis. The boronic acid sensors were used for selective and sensitive recognition of disaccharides and glycosylated steroids (ginsenosides).     

Doubly Dynamic Self‐Healing Materials Based on Oxime Click Chemistry and Boronic Acids

The dynamic covalent characteristics of oxime and boronate ester bonds have been explored. A small excess of a competing aldehyde under acidic conditions resulted in oxime polymer degradation from high molecular weights (30 kDa) to low molecular weight oligomers (2.2 kDa). The dynamic nature of oxime bonds imparts oxime cross‐linked hydrogels with self‐healing properties and the incorporation of phenyl boronic acid groups into the hydrogel network provides a platform for hydrogel functionalization. The addition of a polyphenol (tannic acid) proves a facile means to incorporate a second, dynamic covalent cross‐linking network through boronate ester formation which, owing to the increase in the degree of cross‐linking, is found to be nearly double the hydrogel strength (storage modulus increased from 4.6 to 8.5 kPa). Finally, the tannic acid cross‐linking network is selectively degraded returning the hydrogel storage modulus to its initial value and providing a means for the synthesis of materials with tunable mechanical properties.

     

A BODIPY derivative as a highly selective "Off-On" fluorescent chemosensor for hydrogen sulfate anion

A new fluorescent receptor for anions has been synthesized by the combination of BODIPY dye and indole moiety. The binding and sensing abilities of receptor toward various anions have been studied by absorption, emission and (1)H NMR titrations spectroscopies. Receptor could act as a highly selective "Off-On" fluorescent sensor for hydrogen sulfate anion in CH(3)CN solvent and CH(3)CN-H(2)O medium. The fluorescence response of receptor toward HSO(4)(-) in CH(3)CN solvent could be due to the suppressed PET (photo-induced electron transfer) process induced by the multiple hydrogen bonding interactions between receptor and HSO(4)(-). In CH(3)CN-H(2)O medium, the HSO(4)(-)-induced change is mainly the consequence of a simple protonation of the CH[double bond, length as m-dash]N- moiety of receptor , which inhibited the PET process and "turned on" the fluorescence of .     

Dipyrrinone imines: controlling self-association

We report the synthesis of three new dipyrrinone imine analogues and the characterisation of their self-association properties. Based on vapour pressure osmometry and nuclear magnetic resonance studies, placing the imine functional group at C(9) of the dipyrrinone disrupts the native self-association of the dipyrrinone core in a manner that correlates with the conformational A-value of the imine N-substituent.     

Beiträge zur Chemie der Pyrrolpigmente, 85. Mitt.: Darstellung und Lumineszenz hetero-bichromophorer Oligopyrrol-Systeme

Summary Systems consisting of a bilindione or dipyrrinone chromophore and a covalently attached, but nonconjugated, fluorescing naphthyl, anthranyl, and indolyl residue were prepared and their luminescence properties measured. Excitation energy is very effectively quenched by the dipyrrin radiationless deexcitation channel of bilins as well as by the photodiastereomerization mode of dipyrrinone fragments. A Förster type energy transfer mechanism is inferred from intermolecular Stern-Volmer kinetics in solvents of different viscosity.

     

Cholic acid-based fluorescent sensor for mercuric and methyl mercuric ion in aqueous solutions

Cholic acid-based fluorescent PET sensor probe 1, bearing a pair of dithiocarbamate pendants as the receptive site and anthracene moiety as the signal displaying unit, was designed and synthesized. The sensor probe not only shows high selectivity and sensitivity to Hg²⁺ in aqueous acetonitrile solution, but also responds moderately to MeHg⁺. A distinctive OFF-ON type signaling of up to 10-fold enhancement was observed for this new sensor probe toward Hg²⁺.     

Naphthalimide-based fluorescent Zn chemosensors showing PET effect according to their linker length in water

We have developed naphthalimide-based fluorescent chemosensors that exhibit fluorescence enhancement upon binding Zn²⁺ ion in 10 mM HEPES buffer (pH 7.4) at 25 °C. The fluorescence enhancement was induced by a PET inhibition process in which electron transfer from the nitrogen lone pair electrons of the Dpa unit to naphthalimide was blocked upon the binding of the sensor to Zn²⁺. The longer the linker length (n = 1-3) of the sensor, the less the PET efficiency becomes. Among the sensors (1, 2, and 3) examined, 1 shows the highest selectivity and sensitivity for Zn²⁺ over other transition metal ions and alkali metal ions in water.     

On the loss of CH from o-methylbenzaldoxime. Evidence for an ortho assisted oxime→nitrone isomerization

Isomerization of oxime molecular ions into nitrone molecular ions upon electron impact does not generally occur, but it was established with the aid of deuterium labelling that it is essential for loss of CH from o-methylbenzaldoxime.     

In vitro and in vivo metabolisms of K-48

Metabolic pathways of the oxime K-48 have been elucidated by means of in vitro and in vivo experiments. K-48 exposure to rat liver microsomal fraction resulted in the formation of a hydroxylated derivative, in addition to a small molecular fragment. The in vivo metabolism in rats was investigated after intramuscular administration of 50 μmol oxime. K-48 was present in the rat serum in unchanged form. Similarly, the analysis of rat cerebrospinal fluid indicated the sole occurrence of unchanged K-48. In contrast, unchanged K-48 was not found in the rat urine, where only the metabolite generated by epoxidation on the alkyl chain connecting the two pyridinium rings was present. The presence of unchanged K-48 in the serum and cerebrospinal fluid facilitates quantitative determination using HPLC separation and ultraviolet absorbance detection. Figure Suggested metabolic pathways of K-48     

全氟磺酸锂电导率式湿度传感器

以碳纸为电极,Nafion溶液再铸薄膜为感湿材料,并用氯化锂将膜转换成Li+型,制备了固体聚合物电解质湿度传感器.测定了不同相对湿度下,传感器的电导率响应与相对湿度之间关系.结果表明:在相对湿度为10%～97%范围内,传感器的电导率响应对数与相对湿度之间成良好的线性关系,线性度为0.997;传感器响应的时间为40s左右;于200h内稳定性和重复性良好.     

Semirubin. A novel dipyrrinone strapped by intramolecular hydrogen bonds

(4Z)-9-(5-Carboxypentyl)-2,3,7,8-tetramethyl-(10H)-dipyrrin- 1-one (1, semirubin), a new dipyrrinone model for one-half of bilirubin, the yellow-orange neurotoxic pigment of jaundice, was synthesized following Friedel-Crafts acylation of 2,3,7, 8-tetramethyl-(10H)-dipyrrin-1-one (5) with the half-ester acid chloride of adipic acid. Unlike other dipyrrinone models for bilirubin, such as the xanthobilirubic acids, which engage only in intermolecular hydrogen bonding, 1 is unique in having been designed and found to engage in intramolecular hydrogen bonding, between the carboxylic acid and the dipyrrinone lactam and pyrrole. This important conformation-determining structural characteristic, shared by 1 and bilirubin, renders them less polar than their methyl esters and leaves them monomeric in nonpolar solvents, where their esters are dimeric. The corresponding 10-oxo analogue (3) of 1 serves as a model for 10-oxo-bilirubin, a presumed bilirubin metabolite in alternate pathways for bilirubin excretion. Like 1, 3 is found to engage in intramolecular hydrogen bonding. Unlike the methyl ester of 1, the ethyl ester of 3 is not intermolecularly hydrogen bonded in nonpolar solvents.     

New fluorescent perylene bisimide indicators—a platform for broadband pH optodes

Asymmetric perylene bisimide (PBI) dyes are prepared and are shown to be suitable for the preparation of fluorescence chemosensors for pH. They carry one amino-functional substituent which introduces pH sensitivity via photoinduced electron transfer (PET) while the other one increases solubility. The luminescence quantum yields for the new indicators exceed 75% in the protonated form. The new indicators are non-covalently entrapped in polyurethane hydrogel D4 and poly(hydroxyalkylmethacrylates). Several PET functions including aliphatic and aromatic amino groups were successfully used to tune the dynamic range of the sensor. Because of their virtually identical spectral properties, various PBIs with selected PET functions can easily be integrated into a single sensor with enlarged dynamic range (over 4 pH units). PBIs with two different substitution patterns in the bay position are investigated and possess variable spectral properties. Compared with their tetrachloro analogues, tetra-tert-butyl-substituted PBIs yield more long-wave excitable sensors which feature excellent photostability. Cross-sensitivity to ionic strength was found to be negligible. The practical applicability of the sensors may be compromised by the long response times (especially in case of tetra-tert-butyl-substituted PBIs).