Orientation‐Controlled Single‐Molecule Junctions

The conductivity of a single aromatic ring, perpendicular to its plane, is determined using a new strategy under ambient conditions and at room temperature by a combination of molecular assembly, scanning tunneling microscopy (STM) imaging, and STM break junction (STM‐BJ) techniques. The construction of such molecular junctions exploits the formation of highly ordered structures of flat‐oriented mesitylene molecules on Au(111) to enable direct tip/π contacts, a result that is not possible by conventional methods. The measured conductance of Au/π/Au junction is about 0.1 G_o , two orders of magnitude higher than the conductance of phenyl rings connected to the electrodes by standard anchoring groups. Our experiments suggest that long‐range ordered structures, which hold the aromatic ring in place and parallel to the surface, are essential to increase probability of the formation of orientation‐controlled molecular junctions.     

Iron Polyoxometalate Single‐Molecule Magnets

Iron sandwich on a tungstate bun : Two new polyoxotungstates with paramagnetic iron(III) heteroatoms (see structure, W blue, Fe yellow, O red) possess S=15/2 and S=5 ground states. Both compounds are single‐molecule magnets, and the hexairon species shows large hysteresis (see picture) and quantum tunneling effects at low temperature. Electrochemical studies indicate that these species are stable in solution for a wide range of pH values.

     

Development of Single‐Molecule Magnets†

Single‐molecule magnets (SMMs) are paramagnetic molecules that can be magnetized below a certain temperature and have potential applications in high‐density information storage, magnetic qubits, spintronic devices, etc. The discovery of the first SMM, Mn₁₂, opened a new era of molecular magnetism and promoted collaborative researches between chemists and physicists for their exotic quantum as well as classical magnetic properties. In the recent past, great efforts have been made to develop strategies for constructing new SMMs with high energy barriers (U_eff) and blocking temperatures (T_B), resulting in great and fast development of SMMs. In this concise review, we highlight the main synthetic approaches and representative results in the design and synthesis of high performance SMMs. We hope to give the readers a basic understanding of SMMs and a snapshot of the representative researches on SMMs from a perspective of synthetic chemists.     

Surface Plasmon Resonance Microscopy: From Single‐Molecule Sensing to Single‐Cell Imaging

Surface plasmon resonance microscopy (SPRM) is a versatile platform for chemical and biological sensing and imaging. Great progress in exploring its applications, ranging from single‐molecule sensing to single‐cell imaging, has been made. In this Minireview, we introduce the principles and instrumentation of SPRM. We also summarize the broad and exciting applications of SPRM to the analysis of single entities. Finally, we discuss the challenges and limitations associated with SPRM and potential solutions.     

Dysprosiacarboranes as Organometallic Single‐Molecule Magnets

The dicarbollide ion, nido‐C₂B₉H₁₁^2? is isoelectronic with cyclopentadienyl. Herein, we make dysprosiacarboranes, namely [(C₂B₉H₁₁)₂Ln(THF)₂][Na(THF)₅] (Ln=Dy, 1Dy ) and [(THF)₃(μ‐H)₃Li]₂[{η⁵‐C₆H₄(CH₂)₂C₂B₉H₉}Dy{η²:η⁵‐C₆H₄(CH₂)₂C₂B₉H₉}₂Li] 3Dy and show that dicarbollide ligands impose strong magnetic axiality on the central Dy^III ion. The effective energy barrier (U_eff) for the loss of magnetization can be varied by the substitution pattern on the dicarbollide. This finding is demonstrated by comparing complexes of nido‐C₂B₉H₁₁^2? and nido‐[o‐xylylene‐C₂B₉H₉]^2?, which show a U_eff of 430(5) K and 804(7) K, respectively. The blocking temperature defined by the open hysteresis temperature of 3Dy reaches 6.8 K. Moreover, the linear complex [Dy(C₂B₉H₁₁)₂]^? is predicted to have comparable properties with the linear [Dy(Cp^Me3)₂]⁺ complex. As such, carboranyl ligands and their derivatives may provide a new type of organometallic ligand for high‐performance single‐molecule magnets.     

Single‐Molecule Localization Microscopy using mCherry

We demonstrate the potential of the commonly used red fluorescent protein mCherry for single‐molecule super‐resolution imaging. mCherry can be driven into a light‐induced dark state in the presence of a thiol from which it can recover spontaneously or by irradiation with near UV light. We show imaging of subcellular protein structures such as microtubules and the nuclear pore complex with a resolution below 40 nm. We were able to image the C‐terminus of the nuclear pore protein POM121, which is on the inside of the pore and not readily accessible for external labeling. The photon yield for mCherry is comparable to that of the latest optical highlighter fluorescent proteins. Our findings show that the widely used mCherry red fluorescent protein and the vast number of existing mCherry fusion proteins are readily amenable to super‐resolution imaging. This obviates the need for generating novel protein fusions that may compromise function or the need for external fluorescent labeling.     

Direct Measurement of Single‐Molecule DNA Hybridization Dynamics with Single‐Base Resolution

Herein, we report label‐free detection of single‐molecule DNA hybridization dynamics with single‐base resolution. By using an electronic circuit based on point‐decorated silicon nanowires as electrical probes, we directly record the folding/unfolding process of individual hairpin DNAs with sufficiently high signal‐to‐noise ratio and bandwidth. These measurements reveal two‐level current oscillations with strong temperature dependence, enabling us to determine the thermodynamic and kinetic properties of hairpin DNA hybridization. More importantly, successive, stepwise increases and decreases in device conductance at low temperature on a microsecond timescale are successfully observed, indicating a base‐by‐base unfolding/folding process. The process demonstrates a kinetic zipper model for DNA hybridization/dehybridization at the single base‐pair level. This measurement capability promises a label‐free single‐molecule approach to probe biomolecular interactions with fast dynamics.     

Butterfly‐Shaped Pentanuclear Dysprosium Single‐Molecule Magnets

Two new “butterfly‐shaped” pentanuclear dysprosium(III) clusters, [Dy₅(μ₃‐OH)₃(opch)₆(H₂O)₃] ? 3 MeOH ? 9 H₂O ( 1 ) and [Dy₅(μ₃‐OH)₃(Hopch)₂(opch)₄(MeOH)(H₂O)₂] ? (ClO₄)₂ ? 6 MeOH ? 4 H₂O ( 2 ), which were based on the heterodonor‐chelating ligand o‐vanillin pyrazine acylhydrazone (H₂opch), have been successfully synthesized by applying different reaction conditions. Single‐crystal X‐ray diffraction analysis revealed that the butterfly‐shaped cores in both compounds were comparable. However, their magnetic properties were drastically different. Indeed, compound 1 showed dual slow‐relaxation processes with a transition between them that corresponded to energy gaps (Δ) of 8.1 and 37.9 K and pre‐exponential factors (τ₀) of 1.7×10^?5 and 9.7×10^?8 s for the low‐ and high‐temperature domains, respectively, whilst only a single relaxation process was noted for compound 2 (Δ=197 K, τ₀=3.2×10^?9 s). These significant disparities are most likely due to the versatile coordination of the H₂opch ligands with particular keto–enol tautomerism, which alters the strength of the local crystal field and, hence, the nature or direction of the easy axes of anisotropic dysprosium ions.     

Variable Temperature Single‐Molecule Dynamics of MEH‐PPV

Herein, we continue our investigation of the single‐molecule spectroscopy of the conjugated polymer poly[2‐methoxy,5‐(2′‐ethylhexyloxy)‐p‐phenylene‐vinylene] (MEH‐PPV) at cryogenic temperatures. First, the low temperature microsecond dynamics of single MEH‐PPV conjugated polymer molecules are compared to the dynamics at room temperature revealing no detectible temperature dependence. The lack of temperature dependence is consistent with the previous assignment of the dynamics to a mechanism that involves intersystem crossing and triplet–triplet annihilation. Second, the fluorescence spectra of single MEH‐PPV molecules at low temperature are studied as a function of excitation wavelength (i.e. 488, 543, and 568 nm). These results exhibit nearly identical fluorescence spectra for different excitation wavelengths. This strongly suggests that electronic energy transfer occurs efficiently to a small number of low‐energy sites in the multichromophoric MEH‐PPV chains.     

A Chemically Soldered Polyoxometalate Single‐Molecule Transistor

Polyoxometalates have been proposed in the literature as nanoelectronic components, where they could offer key advantages with their structural versatility and rich electrochemistry. Apart from a few studies on their ensemble behaviour (as monolayers or thin films), this potential remains largely unexplored. We synthesised a pyridyl‐capped Anderson–Evans polyoxometalate and used it to fabricate single‐molecule junctions, using the organic termini to chemically “solder” a single cluster to two nanoelectrodes. Operating the device in an electrochemical environment allowed us to probe charge transport through different oxidation states of the polyoxometalate, and we report here an efficient three‐state transistor behaviour. Conductance data fits a quantum tunnelling mechanism with different charge‐transport probabilities through different charge states. Our results show the promise of polyoxometalates in nanoelectronics and give an insight on their single‐entity electrochemical behaviour.     

Observing Single‐Molecule Dynamics at Millimolar Concentrations

Single‐molecule fluorescence microscopy is a powerful tool for revealing chemical dynamics and molecular association mechanisms, but has been limited to low concentrations of fluorescent species and is only suitable for studying high affinity reactions. Here, we combine nanophotonic zero‐mode waveguides (ZMWs) with fluorescence resonance energy transfer (FRET) to resolve single‐molecule association dynamics at up to millimolar concentrations of fluorescent species. This approach extends the resolution of molecular dynamics to >100‐fold higher concentrations, enabling observations at concentrations relevant to biological and chemical processes, and thus making single‐molecule techniques applicable to a tremendous range of previously inaccessible molecular targets. We deploy this approach to show that the binding of cGMP to pacemaking ion channels is weakened by a slower internal conformational change.     

Magnetic Bistability of Individual Single‐Molecule Magnets Grafted on Single‐Wall Carbon Nanotubes

A POM to remember : Hexanuclear Fe^III polyoxometalate (POM) single‐molecule magnets (see structure) can be noncovalently assembled on the surface of single‐wall carbon nanotubes. Complementary characterization techniques (see TEM image and magnetic hysteresis loops) demonstrate the integrity and bistability of the individual molecules, which could be used to construct single‐molecule memory devices.

     

A Trinuclear Radical‐Bridged Lanthanide Single‐Molecule Magnet

Assembly of the triangular, organic radical‐bridged complexes Cp*₆Ln₃(μ₃‐HAN) (Cp*=pentamethylcyclopentadienyl; Ln=Gd, Tb, Dy; HAN=hexaazatrinaphthylene) proceeds through the reaction of Cp*₂Ln(BPh₄) with HAN under strongly reducing conditions. Significantly, magnetic susceptibility measurements of these complexes support effective magnetic coupling of all three Ln^III centers through the HAN^3−. radical ligand. Thorough investigation of the Dy^III congener through both ac susceptibility and dc magnetic relaxation measurements reveals slow relaxation of the magnetization, with an effective thermal relaxation barrier of U_eff=51 cm⁻¹. Magnetic coupling in the Dy^III complex enables a large remnant magnetization at temperatures up to 3.0 K in the magnetic hysteresis measurements and hysteresis loops that are open at zero‐field up to 3.5 K.     

Anisotropic Conductivity at the Single‐Molecule Scale

In most junctions built by wiring a single molecule between two electrodes, the electrons flow along only one axis: between the two anchoring groups. However, molecules can be anisotropic, and an orientation‐dependent conductance is expected. Here, we fabricated single‐molecule junctions by using the electrode potential to control the molecular orientation and access individual elements of the conductivity tensor. We measured the conductance in two directions, along the molecular plane as the benzene ring bridges two electrodes using anchoring groups (upright) and orthogonal to the molecular plane with the molecule lying flat on the substrate (planar). The perpendicular (planar) conductance is about 400 times higher than that along the molecular plane (upright). This offers a new method for designing a reversible room‐temperature single‐molecule electromechanical switch that controllably employs the electrode potential to orient the molecule in the junction in either “ON” or “OFF” conductance states.     

Recent Developments in Lanthanide Single‐Molecule Magnets

Single‐molecule magnets (SMMs) exhibiting slow relaxation of magnetization of purely molecular origin are highly attractive owing to their potential applications in spintronic devices, high‐density information storage, and quantum computing. In particular, lanthanide SMMs have been playing a major role in the advancement of this field because of the large intrinsic magnetic anisotropy of lanthanide metal ions. Herein, some recent breakthroughs that are changing the perspective of the field are highlighted, with special emphasis on synthetic strategies towards the design of high‐performance SMMs.     

Single‐Molecule Study of a Plasmon‐Induced Reaction for a Strongly Chemisorbed Molecule

Chemical reactions induced by plasmons achieve effective solar‐to‐chemical energy conversion. However, the mechanism of these reactions, which generate a strong electric field, hot carriers, and heat through the excitation and decay processes, is still controversial. In addition, it is not fully understood which factor governs the mechanism. To obtain mechanistic knowledge, we investigated the plasmon‐induced dissociation of a single‐molecule strongly chemisorbed on a metal surface, two O₂ species chemisorbed on Ag(110) with different orientations and electronic structures, using a scanning tunneling microscope (STM) combined with light irradiation at 5 K. A combination of quantitative analysis by the STM and density functional theory calculations revealed that the hot carriers are transferred to the antibonding (π*) orbitals of O₂ strongly hybridized with the metal states and that the dominant pathway and reaction yield are determined by the electronic structures formed by the molecule–metal chemical interaction.