Electronic coherence effects in photosynthetic light harvesting

Photosynthetic light harvesting is a paradigmatic example for quantum effects in biology. In this work, we review studies on quantum coherence effects in the LH2 antenna complex from purple bacteria to demonstrate how quantum mechanical rules play important roles in the speedup of excitation energy transfer, the stabilization of electronic excitations, and the robustness of light harvesting in photosynthesis. Subsequently, we present our recent theoretical studies on exciton dynamical localization and excitonic coherence generation in photosynthetic systems. We apply a variational-polaron approach to investigate decoherence of exciton states induced by dynamical fluctuations due to system-environment interactions. The results indicate that the dynamical localization of photoexcitations in photosynthetic complexes is significant and imperative for a complete understanding of coherence and excitation dynamics in photosynthesis. Moreover, we use a simple model to investigate quantum coherence effects in intercomplex excitation energy transfer in natural photosynthesis, with a focus on the likelihoods of generating excitonic coherences during the process. Our model simulations reveal that excitonic coherence between acceptor exciton states and transient nonlocal quantum correlation between distant pairs of chromophores can be generated through intercomplex energy transfer. Finally, we discuss the implications of these theoretical works and important open questions that remain to be answered.     

Coherent Exciton-Phonon Coupling in CdSe/ZnS Nanocrystals Studied by Two-Dimensional Electronic Spectroscopy

Coherent exciton-phonon coupling in CdSe/ZnS nanocrystals have been investigated by temperature-dependent two-dimensional electronic spectroscopy (2DES) measurements. Benefiting from the ability of 2DES to dissect assembles in nanocrystal films, we have clearly identified experimental evidences of coherent coupling between exciton and phonon in CdSe/ZnS nanocrystals. In time domain, 2DES signals of excitonic transitions beat at a frequency resonant to a longitudinal optical phonon mode; in energy domain, phonon side bands are distinct at both Stokes and anti-Stokes sides. When temperature increases, phonon-induced exciton dephasing is observed with dramatic broadening of homogeneous linewidth. The results suggest exciton-phonon coupling is essential in elucidating the quantum dynamics of excitonic transitions in semiconductor nanocrystals.     

Excited and ground state vibrational dynamics revealed by two-dimensional electronic spectroscopy

Broadband two-dimensional electronic spectroscopy (2DES) can assist in understanding complex electronic and vibrational signatures. In this paper, we use 2DES to examine the electronic structure and dynamics of a long chain cyanine dye (1,1-diethyl-4,4-dicarbocyanine iodide, or DDCI-4), a system with a vibrational progression. Using broadband pulses that span the resonant electronic transition, we measure two-dimensional spectra that show a characteristic six peak pattern from coherently excited ground and excited state vibrational modes. We model these features using a spectral density formalism and the vibronic features are assigned to Feynman pathways. We also examine the dynamics of a particular set of peaks demonstrating anticorrelated peak motion, a signature of oscillatory wavepacket dynamics on the ground and excited states. These dynamics, in concert with the general structure of vibronic two-dimensional spectra, can be used to distinguish between pure electronic and vibrational quantum coherences.     

Electronic coherence within the semiclassical field-induced surface hopping method: strong field quantum control in K2

We demonstrate that the semiclassical field-induced surface hopping (FISH) method (Mitri?et al., Phys. Rev. A: At., Mol., Opt. Phys., 2009, 79, 053416.) accurately describes the selective coherent control of electronic state populations. With the example of the strong field control in the potassium dimer using phase-coherent double pulse sequences, we present a detailed comparison between FISH simulations and exact quantum dynamics. We show that for short pulses the variation of the time delay between the subpulses allows for a selective population of the desired final state with high efficiency. Furthermore, also for pulses of longer time duration, when substantial nuclear motion takes place during the action of the pulse, optimized pulse shapes can be obtained which lead to selective population transfer. For both types of pulses, the FISH method almost perfectly reproduces the exact quantum mechanical electronic population dynamics, fully taking account of the electronic coherence, and describes the leading features of the nuclear dynamics accurately. Due to the significantly higher computational efficiency of FISH as a trajectory-based method compared to full quantum dynamics simulations, this offers the possibility to theoretically investigate control experiments on realistic systems including all nuclear degrees of freedom.     

Ultrafast Dynamics Probed by the Time‐Resolved Anisotropy Measurements

In this paper, we shall show that in order to effectively observe the quantum beat due to vibrational coherence by the anisotropy measurement, it is necessary to perform the frequency‐resolved measurement in the transient absorption. It is found that the quantum beat due to vibrational coherence cannot be observed if the ultrafast processes under observation do not involve an electronic transition. In order to effectively observe the quantum beat due to vibronic coherence, it is necessary to perform the frequency‐integrated time‐resolved anisotropy measurement. We also show that it is usually difficult to obtain accurate dynamics information from the time‐resolved anisotropy measurement.     

Ultrafast coherent dynamics of nonadiabatically coupled quasi-degenerate excited states in molecules: Population and vibrational coherence transfers

Results of a theoretical study of ultrafast coherent dynamics of nonadiabatically coupled quasi-degenerate π-electronic excited states of molecules were presented. Analytical expressions for temporal behaviors of population and vibrational coherence were derived using a simplified model to clarify the quantum mechanical interferences between the two coherently excited electronic states, which appeared in the nuclear wavepacket simulations [M. Kanno, H. Kono, Y. Fujimura, S.H. Lin, Phys. Rev. Lett 104 (2010) 108302]. The photon-polarization direction of the linearly polarized laser, which controls the populations of the two quasi-degenerate electronic states, determines constructive or destructive interference. Features of the vibrational coherence transfer between the two coupled quasi-electronic states through nonadiabatic couplings are also presented. Information on both the transition frequency and nonadiabatic coupling matrix element between the two states can be obtained by analyzing signals of two kinds of quantum beats before and after transfer through nonadiabatic coupling.     

A Three-State Model for Electronic Transitions Represented in a Generalized Diabatic Approach

We describe the chemical change between two diabatic closed-shell states as an electronic transition mediated by two factors: a bound diabatic transition state and the electromagnetic field. Using a three-state model for bond breaking, we compute the amplitudes of the total quantum state on the diabatic reactant, product, and transition states as a function of the external field. Changes in the total electronic state appear as sharp transitions between diabatic basis functions for particular configurations of the set of external positive charges. Depending on the diabatic states and the external field, the model predicts the possible occurrence of energy barriers for breaking or forming covalent bonds.     

Influences of Quantum Mechanically Mixed Electronic and Vibrational Pigment States in 2D Electronic Spectra of Photosynthetic Systems: Strong Electronic Coupling Cases

In 2D electronic spectroscopy studies, long‐lived quantum beats have recently been observed in photosynthetic systems, and several theoretical studies have suggested that the beats are produced by quantum mechanically mixed electronic and vibrational states. Concerning the electronic‐vibrational quantum mixtures, the impact of protein‐induced fluctuations was examined by calculating the 2D electronic spectra of a weakly coupled dimer with the Franck‐Condon active vibrational modes in the resonant condition [Fujihashi et al., J. Chem. Phys.­ 2015 , 142, 212403.]. This analysis demonstrated that quantum mixtures of the vibronic resonance are rather robust under the influence of the fluctuations at cryogenic temperatures, whereas the mixtures are eradicated by the fluctuations at physiological temperatures. However, this conclusion cannot be generalized because the magnitude of the coupling inducing the quantum mixtures is proportional to the inter‐pigment electronic coupling. In this study, we explore the impact of the fluctuations on electronic‐vibrational quantum mixtures in a strongly coupled dimer with an off‐resonant vibrational mode. Toward this end, we calculate energy transfer dynamics and 2D electronic spectra of a model dimer that corresponds to the most strongly coupled bacteriochlorophyll molecules in the Fenna‐Matthews‐Olson complex in a numerically accurate manner. The quantum mixtures are found to be robust under the exposure of protein‐induced fluctuations at cryogenic temperatures, irrespective of the resonance. At 300 K, however, the quantum mixing is disturbed more strongly by the fluctuations, and therefore, the beats in the 2D spectra become obscure even in a strongly coupled dimer with a resonant vibrational mode. Further, the overall behaviors of the energy transfer dynamics are demonstrated to be dominated by the environment and coupling between the 0 0 vibronic transitions as long as the Huang‐Rhys factor of the vibrational mode is small. The electronic‐vibrational quantum mixtures do not necessarily play a significant role in electronic energy transfer dynamics despite contributing to the enhancement of long‐lived quantum beating in the 2D spectra.     

Recent progress in probing atomic and molecular quantum coherence with scanning tunneling microscopy

Quantum coherent physics and chemistry concern the creation and manipulation of an excited-state manifold that contains the superposition and entanglement of multiple quantum levels. Electromagnetic waves such as light and microwave can be used to generate and probe different quantum coherent phenomena. The recent advances in scanning tunneling microscopy (STM) techniques including ultrafast laser coupled STM and electron spin resonance STM combine electromagnetic excitation with tunneling electron detection, bringing the investigation of quantum coherence down to the atomic and molecular level. Here, we survey the latest STM studies of different quantum coherent phenomena covering molecular vibration, electron transfer, surface plasmon resonance, phonon, spin oscillation, and electronic transition, and discuss the state and promise of characterizing and manipulating quantum coherence at the atomic or molecular scale.     

Quantitative investigations of quantum coherence for a light-harvesting protein at conditions simulating photosynthesis

Recent measurements using two-dimensional electronic spectroscopy (2D ES) have shown that the initial dynamic response of photosynthetic proteins can involve quantum coherence. We show how electronic coherence can be differentiated from vibrational coherence in 2D ES. On that basis we conclude that both electronic and vibrational coherences are observed in the phycobiliprotein light-harvesting complex PC645 from Chroomonas sp. CCMP270 at ambient temperature. These light-harvesting antenna proteins of the cryptophyte algae are suspended in the lumen, where the pH drops significantly under sustained illumination by sunlight. Here we measured 2D ES of PC645 at increasing levels of acidity to determine if the change in pH affects the quantum coherence; quantitative analysis reveals that the dynamics are insensitive to the pH change.     

先兆型铁电体CaTiO3的第一性原理研究

在广义梯度近似(GGA)下利用全电势线性化的缀加平面波法(FPLAPW)计算了钛酸钙(CaTiO3)的电子结构.将实验测得的晶胞体积记为V0,计算中所用的晶胞体积记为V.当V/V0=1.0时, Ti离子位移为零相应于总能量低能态,钛酸钙不会发生铁电相变.但如果其体积膨胀10%,则Ti离子的位移将导致能量极小值.这意味着在立方钛酸钙中有发生铁电相变的趋势,表明在钛酸钙中存在着体积诱发的铁电相变,即钛酸钙为先兆型铁电体.态密度在V/V0=1.1时, Ti d电子和O(2) p电子之间存在强烈的轨道杂化,这种杂化是出现铁电性的必要条件.电场梯度的结果也表明了这一点.     

Electronic and nuclear flux analysis on nonadiabatic electron transfer reaction: A view from single-configuration adiabatic born–huang representation

A detailed flux analysis on nonadiabatically coupled electronic and nuclear dynamics in the intramolecular electron transfer of LiF is presented. Full quantum dynamics both of electrons and nuclei within two-state model has uncovered interesting features of the individual fluxes (current of probability density) and correlation between them. In particular, a spatiotemporal oscillatory pattern of electronic flux has been revealed, which reflects the coherence coming from spatiotemporal differential overlap between nuclear wavepackets running on covalent and ionic potential curves. In this regard, a theoretical analogy between the nonadiabatic transitions and the Rabi oscillation is surveyed. We also present a flux–flux correlation between the nuclear and electronic motions, which quantifies the extent of deviation of the actual electronic and nuclear coupled dynamics from the Born–Oppenheimer adiabatic limit, which is composed only of a single product of the adiabatic electronic and nuclear wavefunctions. © 2018 Wiley Periodicals, Inc.     

The Influence of Dissipation on Vibrational Dynamics in a System of Two Interacting Electronic States

The vibrational dynamics of a nonadiabatic transition between two interacting electronic states in a molecular system in a thermal environment was considered. Two models were used. In one of these, both states, and in the other, only one state interacted with the environment. The electronic states were described by one-dimensional harmonic oscillators on the assumption that the interaction amplitude with the environment (bath) linearly depended on the coordinates of the bath and system. Model parameters typical of electron transfer in photosynthesis reaction centers were selected. The numerical solutions to the Redfield equations for the reduced density matrix were used to calculate the time characteristics of the system, including the mean vibrational energy, product population, and the degree of vibrational motion coherence. The influence of temperature and intensity of interactions with the bath on the time dependence of these values was studied. The character of vibrational dynamics had features common to both models, namely, (1) the vibrational energy monotonically decreased with the time, and this dependence was close to one-exponential in the majority of cases and (2) the time dependence of reaction yield, i.e., product population, was a step function, and the probability of the electron transition decreased as the temperature increased. It was found that there was a fundamental difference between the models under consideration: if only the reaction product interacted with the bath, vibrational coherence was retained for a long time (up to 2000 fs).     

Visualizations of transition dipoles, charge transfer, and electron-hole coherence on electronic state transitions between excited states for two-photon absorption

The one-photon absorption (OPA) properties of donor-pi-bridge-acceptor-pi-bridge-donor (D-pi-A-pi-D)-type 2,1,3-benzothiadiazoles (BTD) were studied with two dimensional (2D) site and three dimensional (3D) cube representations. The 2D site representation reveals the electron-hole coherence on electronic state transitions from the ground state. The 3D representation shows the orientation of transition dipole moment with transition density, and the charge redistribution on the excited states with charge difference density. In this paper, we further developed the 2D site and 3D cube representations to investigate the two-photon absorption (TPA) properties of D-pi-A-pi-D-type BTD on electronic transitions between excited states. With the new developed 2D site and 3D cube representations, the orientation of transition dipole moment, the charge redistribution, and the electron-hole coherence for TPA of D-pi-A-pi-D-type BTD on electronic state transitions between excited states were visualized, which promote deeper understanding to the optical and electronic properties for OPA and TPA.     

Electronic coherence dynamics in trans-polyacetylene oligomers

Electronic coherence dynamics in trans-polyacetylene oligomers are considered by explicitly computing the time dependent molecular polarization from the coupled dynamics of electronic and vibrational degrees of freedom in a mean-field mixed quantum-classical approximation. The oligomers are described by the Su-Schrieffer-Heeger Hamiltonian and the effect of decoherence is incorporated by propagating an ensemble of quantum-classical trajectories with initial conditions obtained by sampling the Wigner distribution of the nuclear degrees of freedom. The electronic coherence of superpositions between the ground and excited and between pairs of excited states is examined for chains of different length, and the dynamics is discussed in terms of the nuclear overlap function that appears in the off-diagonal elements of the electronic reduced density matrix. For long oligomers the loss of coherence occurs in tens of femtoseconds. This time scale is determined by the decay of population into other electronic states through vibronic interactions, and is relatively insensitive to the type and class of superposition considered. By contrast, for smaller oligomers the decoherence time scale depends strongly on the initially selected superposition, with superpositions that can decay as fast as 50 fs and as slow as 250 fs. The long-lived superpositions are such that little population is transferred to other electronic states and for which the vibronic dynamics is relatively harmonic.     

Acid/Base‐Triggered Switching of Circularly Polarized Luminescence and Electronic Circular Dichroism in Organic and Organometallic Helicenes

Electronic circular dichroism and circularly polarized luminescence acid/base switching activity has been demonstrated in helicene‐bipyridine proligand 1 a and in its “rollover” cycloplatinated derivative 2 a . Whereas proligand 1 a displays a strong bathochromic shift (>160 nm) of the nonpolarized and circularly polarized luminescence upon protonation, complex 2 a displays slightly stronger emission. This strikingly different behavior between singlet emission in the organic helicene and triplet emission in the organometallic derivative has been rationalized by using quantum‐chemical calculations. The very large bathochromic shift of the emission observed upon protonation of azahelicene‐bipyridine 1 a has been attributed to the decrease in aromaticity (promoting a charge‐transfer‐type transition rather than a π–π* transition) as well as an increase in the HOMO–LUMO character of the transition and stabilization of the LUMO level upon protonation.     

Targeting molecular quantum memory with embedded error correction

The implementation of a quantum computer requires both to protect information from environmental noise and to implement quantum operations efficiently. Achieving this by a fully fault-tolerant platform, in which quantum gates are implemented within quantum-error corrected units, poses stringent requirements on the coherence and control of such hardware. A more feasible architecture could consist of connected memories, that support error-correction by enhancing coherence, and processing units, that ensure fast manipulations. We present here a supramolecular {Cr₇Ni}–Cu system which could form the elementary unit of this platform, where the electronic spin 1/2 of {Cr₇Ni} provides the processor and the naturally isolated nuclear spin 3/2 of the Cu ion is used to encode a logical unit with embedded quantum error-correction. We demonstrate by realistic simulations that microwave pulses allow us to rapidly implement gates on the processor and to swap information between the processor and the quantum memory. By combining the storage into the Cu nuclear spin with quantum error correction, information can be protected for times much longer than the processor coherence.

The implementation of a quantum computer requires protecting of information from noise and the ability to perform quantum gates. We present a molecular architecture providing both these ingredients, via an electronic spin 1/2 processor and a nuclear spin 3/2 memory.     

1,3-二氮杂薁类衍生物电子结构和光谱性质的理论研究

对1,3-二氮杂薁类衍生物采用密度泛函理论(DFT)在B3LYP/6-31G(d)的水平上进行了几何构型的全优化, 在此基础上探讨了分子结构和前线分子轨道能量等性质的变化规律, 采用含时密度泛函理论(TD-DFT)计算了分子的电子跃迁性质, 采用二维平面图和三维立体图来直观表示激发态的性质, 研究分子内电子转移特性. 跃迁密度矩阵的二维等高线图反映了电子-空穴相干性, 三维跃迁密度图反映了跃迁偶极矩的方向和强度, 三维电荷差异密度图说明了激发过程中分子内电子转移性质.     

The First Principle Calculation of Electronic Structure and Optical Properties of CdGeAs_2

The electronic structure and optical properties of CdGeAs2 were calculated by the first principle method using ultra-soft pseudo-potential approach of the plane wave based upon density functional theory （DFT）. Mulliken population analysis showed that atomic orbital hybridization occurs when forming chemical bonds. The relationship between inter-band transition and optical properties was analyzed to provide a theoretical basis for investigating or controlling CdGeAs2 crystal defects.     

Observation of a Long-lived Electronic Coherence Modulated by Vibrational Dynamics in Molecular Nd3+-Complexes at Room Temperature

Temporally delayed, phase-locked coherent pairs of near IR femtosecond laser pulses were employed to study electronic coherences in molecular Nd³⁺-complexes at room temperature. Dissolved and solid complexes were studied under a confocal microscope set-up with fluorescence detection. The observed electronic coherence on a few hundred femtoseconds time scale is modulated by additional coherent wave packet dynamics, which we attribute mainly to be vibrational in nature. In future, the complexes may serve as prototypes for possible applications in quantum information technology.