Effects of the deletion of the <Emphasis Type="Italic">Escherichia coli</Emphasis> frataxin homologue CyaY on the respiratory NADH:ubiquinone oxidoreductase

Background  

Frataxin is discussed as involved in the biogenesis of iron-sulfur clusters. Recently it was discovered that a frataxin homologue is a structural component of the respiratory NADH:ubiquinone oxidoreductase (complex I) in Thermus thermophilus. It was not clear whether frataxin is in general a component of complex I from bacteria. The Escherichia coli homologue of frataxin is coined CyaY.     

Experimental and theoretical study of the complexation of the thallium cation with a hexaarylbenzene-based receptor

Abstract  

From extraction experiments in the two-phase water/nitrobenzene system and γ-activity measurements, the stability constant of a hexaarylbenzene-based receptor. Tl⁺ complex species dissolved in nitrobenzene saturated with water was determined. By using the quantum-mechanical density functional level of theory calculations, the most probable structure of this complex was derived.     

Possibilities and pitfalls in quantifying the extent of cysteine sulfenic acid modification of specific proteins within complex biofluids

Background  

Cysteine sulfenic acid (Cys-SOH) plays important roles in the redox regulation of numerous proteins. As a relatively unstable posttranslational protein modification it is difficult to quantify the degree to which any particular protein is modified by Cys-SOH within a complex biological environment. The goal of these studies was to move a step beyond detection and into the relative quantification of Cys-SOH within specific proteins found in a complex biological setting--namely, human plasma.     

Chemical-genetic profile analysis of five inhibitory compounds in yeast

Background  

Chemical-genetic profiling of inhibitory compounds can lead to identification of their modes of action. These profiles can help elucidate the complex interactions between small bioactive compounds and the cell machinery, and explain putative gene function(s).     

On the complexation of the sodium cation with beauvericin: experimental and theoretical study

Abstract  

From extraction experiments in the two-phase water/nitrobenzene system and γ-activity measurements, the stability constant of the beauvericin·Na⁺ complex species dissolved in nitrobenzene saturated with water was determined. By using quantum mechanical density functional level of theory (DFT) calculations, the most probable structure of this complex species was derived.     

A combined extraction and DFT study on the complexation of the silver cation with dibenzo-18-crown-6

Abstract  

Extraction experiments in the two-phase water/nitrobenzene system and γ-activity measurements were used to determine the stability constant of the dibenzo-18-crown-6·Ag⁺ complex species in nitrobenzene saturated with water. Furthermore, the structure of the resulting complex was derived by means of theoretical calculations at the density functional level.     

Enantioselective synthesis of 1-arylethanediols by rhodium-catalyzed transfer hydrogenation of α-tosyloxyarylketones

Abstract  

Catalytic transfer hydrogenation of α-tosyloxyarylketones mediated by a chiral rhodium complex using an azeotropic mixture of formic acid/triethylamine afforded the corresponding 1-arylethanediol monotosylates in excellent yield with high enantioselectivity.     

A combined extraction and DFT study on the complexation of H3O+ with a hexaarylbenzene-based receptor

Abstract  

By means of theoretical calculations at density functional level, the complex structure of a hexaarylbenzene-based receptor with Na⁺ was derived. In the resulting complex having C ₃ symmetry, the sodium cation synergistically interacts with the hydrophilic polar ethereal oxygen fence and with the central hydrophobic benzene bottom of the parent receptor via cation–π interaction.     

Identification of archaeal proteins that affect the exosome function in vitro

Background  

The archaeal exosome is formed by a hexameric RNase PH ring and three RNA binding subunits and has been shown to bind and degrade RNA in vitro. Despite extensive studies on the eukaryotic exosome and on the proteins interacting with this complex, little information is yet available on the identification and function of archaeal exosome regulatory factors.     

MPN+, a putative catalytic motif found in a subset of MPN domain proteins from eukaryotes and prokaryotes, is critical for Rpn11 function

Background  

Three macromolecular assemblages, the lid complex of the proteasome, the COP9-Signalosome (CSN) and the eIF3 complex, all consist of multiple proteins harboring MPN and PCI domains. Up to now, no specific function for any of these proteins has been defined, nor has the importance of these motifs been elucidated. In particular Rpn11, a lid subunit, serves as the paradigm for MPN-containing proteins as it is highly conserved and important for proteasome function.     

Iron, cysteine and Parkinson’s disease

Abstract  

A short review of the role of cysteine and iron in the progression of Parkinson’s disease is presented. The complex chemistry of cysteine and iron and its interactions are discussed and put into the context of oxidative stress during neurodegeneration.     

A combined experimental and theoretical study on the complexation of the ammonium ion with benzo-18-crown-6

Abstract  

From extraction experiments in the two-phase water/nitrobenzene system and γ-activity measurements, the stability constant of the benzo-18-crown-6–ammonium complex in nitrobenzene saturated with water was determined. Furthermore, the structure of the resulting complex was derived by means of theoretical calculations at the density functional level.     

A combined experimental and theoretical study on the complexation of Li+ with valinomycin

Abstract  

From extraction experiments in the two-phase water–nitrobenzene system and γ-activity measurements, the stability constant of the valinomycin–lithium complex in nitrobenzene saturated with water was determined. Further, the structure of the resulting complex was indicated by means of the density functional level of theory (DFT) calculations.     

DFT study on the preactivation reaction of a palladium catalyst precursor in phosphine-free Heck reactions

Abstract  

The mechanism of the preactivation process of trans-dichlorobis(diethanolamine-N)palladium(II) complex is investigated using density functional theory. The role of diethanolamine (a solvent for the reaction in the absence of a strong base) and acetonitrile (solvent for the reaction in the presence of a strong base) is analyzed by using a discrete model. The Onsager model is applied to assess the effect of the bulk medium. Both models show that diethanolamine activates the complex and thus is a better suited solvent for the Heck reactions of the investigated complex.     

Extraction and DFT study of complexation of the cesium cation with beauvericin

Abstract  

From extraction experiments in the two-phase water–nitrobenzene system and γ-activity measurements, the stability constant of the beauvericin–Cs⁺ complex species dissolved in nitrobenzene saturated with water was determined. By using quantum–mechanical density functional level of theory (DFT) calculations, the most probable structure of this complex was derived.     

A new aspect of Heck catalyst formation

Abstract  

The mechanism of the formation of the active Pd(0) complex from trans-dichlorobis(diethanolamine-N)palladium(II) complex in the presence of strong base was investigated by using density functional theory (M06 method). Our investigation shows that in the basic environment trans-dichlorobis(diethanolamine-N)palladium(II) complex undergoes abstraction of the alcoholic proton, and coordination of alkoxide oxygen to palladium. The intermediate complex, in which hydrogen is coordinated to Pd, undergoes reductive elimination of HCl, yielding the catalytically active low ligated Pd(0) complex.     

Facile solution-phase synthesis of γ-Mn3O4 hierarchical structures

Background  

A lot of effort has been focused on the integration of nanorods/nanowire as building blocks into three-dimensional (3D) complex superstructures. But, the development of simple and effective methods for creating novel assemblies of self-supported patterns of hierarchical architectures to designed materials using a suitable chemical method is important to technology and remains an attractive, but elusive goal.     

Synthesis, characterization, and electron transfer reaction of some surfactant–cobalt(III) complex ions

Abstract  

The surfactant complex ion cis-[Co(tmd)₂(C₁₂H₂₅NH₂)₂]³⁺ (tmd = 1,3-propanediamine, C₁₂H₂₅NH₂ = dodecylamine) has been synthesized and characterized by elemental analysis and spectral data. In addition we have determined the critical micelle concentration of the surfactant–cobalt(III) complex and studied the kinetics and mechanism of the complex with ferrocyanide anion. The reaction is found to be second order, and the second-order rate constant increases with increasing initial concentration of the surfactant–cobalt(III) complex due to the presence of self-micelles formed by the complex itself. The thermodynamic parameters were determined. The results have been analyzed.     

On the protonation of dibenzo-18-crown-6

Abstract  

The stability constant of the dibenzo-18-crown-6·H₃O⁺ cationic complex species dissolved in nitrobenzene saturated with water has been determined from extraction experiments in the two-phase water–nitrobenzene system and from γ-activity measurements. Various structures of protonated dibenzo-18-crown-6 are discussed.     

A chemoselective and one-pot synthesis of 5-hydroxy and 7-hydroxy coumarin derivatives

Abstract  

An efficient one-pot reaction of dialkyl acetylenedicarboxylates with 2,4-dihydroxybenzo(or aceto)phenones in the presence of triphenylphosphine produces 5-hydroxy- and 7-hydroxycoumarin derivatives. The novel procedure features short reaction time, fairly good yields, and simple workup.