Quantum chemical study of the coordination of glycolic acid conformers and their conjugate bases to [Ca(OH2)n] (n=0–4) ions

A detailed exploration of the configurational and conformational space of glycolic acid and their conjugate bases has been carried out with the aid of first principles quantum chemical techniques at the B3LYP/6-311+G(d,p) and CCSD(T)/6-31G(d,p) levels of theory. The most stable configuration among the eight possible glycolic acid conformers corresponds to the E-s-cis, s-trans configuration, while the highest energy E-s-trans, s-cis conformer was found at 10.88 and 12.17 kcal mol⁻¹ higher in energy at the B3LYP/6-311+G(d,p) and CCSD(T)/6-31G(d,p) levels of theory, respectively. Upon dissociation of glycolic acid the s-cis(syn), and s-trans(anti) configurations of the glycolate anion can be formed. The anti conformer was found to be less stable than the syn one by 14.20 and 16.87 kcal mol⁻¹ at the B3LYP/6-311+G(d,p) and CCSD(T)/6-31G(d,p)) levels of theory, respectively. The computed B3LYP/6-311+G(d,p) proton affinity of the syn conformer for the protonation process affording the more stable E-s-cis, s-trans conformer, in vacuum was found to be 325.35 kcal mol⁻¹ (ΔG⁰ value). From a methodological point of view, our results confirm the reliability of the integrated computational tool formed by the B3LYP density functional model. This model has subsequently been used to investigate the interaction of Ca²⁺ ions with the glycolic acid conformers and their conjugate bases in vacuum and in the presence of extra water ligands. For the complexes of glycolic acid conformers the η²–O,O–(COOH) coordination, that is the structure that arises from the coordination of the Ca²⁺ to the carboxylic group, is the global minimum of the PES, while the η²–O(OH),O–(COOH) coordination is a local minimum found at only 1.0 and 1.3 kcal mol⁻¹ higher in energy at the B3LYP/6-311+G(d,p) and CCSD(T)/6-31G(d,p) levels of theory, respectively. Moreover, the two isomers exhibit nearly the same binding affinities, which are predicted to be 89 and 85 kcal mol⁻¹ at the B3LYP/6-311+G(d,p) and CCSD(T)/6-31G(d,p) levels of theory, respectively. The same holds also true for the complexes of the glycolate anion. The η²–O,O–(COO⁻) coordination involving the syn conformer of the glycolato ligand, is the global minimum, while the η²–O(OH),O–(COO⁻) one lies at 1.5 and 5.6 kcal mol⁻¹ higher in energy at the B3LYP/6-311+G(d,p) and CCSD(T)/6-31G(d,p) levels of theory, respectively. The other conformer with an η²–O,O–(COO⁻) coordination involving the anti conformer of the glycolato ligand, is less stable by only 0.2 kcal mol⁻¹ at both levels of theory. Noteworthy is the trend seen for the incremental binding energy due to the successive addition of water molecules to [HOCH₂C(O)O]Ca²⁺ species; the computed values are 30.4, 26.8, 22.9 and 16.2 kcal mol⁻¹ at the B3LYP/6-311+G(d,p) level of theory for the mono-, di-, tri- and tetraaqua complexes, respectively. This trend arising from the repulsion of the dipoles between the water ligands and from unfavorable many body interactions is in accordance with those anticipated from electrostatic considerations. The Ca(II)-water interaction weakens with increasing coordination of the metal. Obviously, it is the electrostatic nature of the Ca(II)-water interactions that accounts well for the computed coordination geometries of the cationic (aqua)(glycolato)calcium complexes. Calculated structures, relative stability and bonding properties of the conformers and their complexes with [Ca(OH₂)_n]²⁺ (n=0–4) ions are discussed with respect to computed electronic and spectroscopic properties, such as charge density distribution, harmonic vibrational frequencies and NMR chemical shifts.     

Ab Initio Study of Conformational Properties of ( Z, Z)-, ( E, Z)-, and ( E, E)-Cyclonona-1,5-dienes

Ab initio calculations at the HF/6-31G^* level of theory for geometry optimization and MP2/6-31G^*//HF/6-31G^* for a single point total energy calculation are reported for the important energy-minimum conformations and transition-state geometries of (Z,Z)-, (E,Z)-, and (E,E)-cyclonona-1,5-dienes. The C₂ symmetric chair conformation of (Z,Z)-cyclonona-1,5-diene is calculated to be the most stable form; the calculated energy barrier for ring inversion of the chair conformation via the C_s symmetric boat-chair geometry is 58.3kJmol^–1. Interconversion between chair and twist-boat-chair (C₁) conformations takes place via the twist (C₁) as intermediate. The unsymmetrical twist conformation of (E,Z)-cyclonona-1,5-diene is the most stable form. Ring inversion of this conformation takes place via the unsymmetrical chair and boat-chair geometries. The calculated strain energy for this process is 63.5kJmol^–1. The interconversion between twist and the boat-chair conformations can take place by swiveling of the trans double bond with respect to the cis double bond and requires 115.6kJmol^–1. The most stable conformation of (E,E)-cyclonona-1,5-diene is the C₂ symmetric twist-boat conformation of the crossed family, which is 5.3kJmol^–1 more stable than the C_s symmetric chair–chair geometry of the parallel family. Interconversion of the crossed and parallel families can take place by swiveling of one of the double bonds and requires 142.0kJmol^–1.     

Ab Initio Study of Conformational Properties of ( Z, Z)-, ( E, Z)-, and ( E, E)-Cyclonona-1,5-dienes

Summary. Ab initio calculations at the HF/6-31G^* level of theory for geometry optimization and MP2/6-31G^*//HF/6-31G^* for a single point total energy calculation are reported for the important energy-minimum conformations and transition-state geometries of (Z,Z)-, (E,Z)-, and (E,E)-cyclonona-1,5-dienes. The C₂ symmetric chair conformation of (Z,Z)-cyclonona-1,5-diene is calculated to be the most stable form; the calculated energy barrier for ring inversion of the chair conformation via the C_s symmetric boat-chair geometry is 58.3kJmol^–1. Interconversion between chair and twist-boat-chair (C₁) conformations takes place via the twist (C₁) as intermediate. The unsymmetrical twist conformation of (E,Z)-cyclonona-1,5-diene is the most stable form. Ring inversion of this conformation takes place via the unsymmetrical chair and boat-chair geometries. The calculated strain energy for this process is 63.5kJmol^–1. The interconversion between twist and the boat-chair conformations can take place by swiveling of the trans double bond with respect to the cis double bond and requires 115.6kJmol^–1. The most stable conformation of (E,E)-cyclonona-1,5-diene is the C₂ symmetric twist-boat conformation of the crossed family, which is 5.3kJmol^–1 more stable than the C_s symmetric chair–chair geometry of the parallel family. Interconversion of the crossed and parallel families can take place by swiveling of one of the double bonds and requires 142.0kJmol^–1.     

Iminopropadienones R–NCCCO and carbon suboxide, C3O2. Theoretical and experimental C NMR spectra

The ¹³C NMR data of five iminopropadienones R–NCCCO as well as carbon suboxide, C₃O₂, have been examined theoretically and experimentally. The best theoretical results were obtained using the GIAO/B3LYP/6-31+G**//MP2/6-31G* level of theory, which reproduces the chemical shifts of the iminopropadienone substituents extremely well while underestimating those of the cumulenic carbons by 5–10 ppm. The computationally faster GIAO/HF/6-31+G**//B3LYP/6-31G* level is also adequate.     

PE-CVD of Fluorocarbon/SiO Composite Thin Films Using C4F8 and HMDSO

Plasma copolymerization of hexamethyldisiloxane (HMDSO,(CH₃)₃-Si-O-Si-(CH₃)₃) and C₄F₈ was performed using an RF plasma enhanced chemical vapor deposition method for application to low dielectric constant intermetal dielectrics. Structure of the films was investigated by X-ray photoelectron spectroscopy and Fourier transform infrared (FT-IR) spectroscopy. The film composition was controlled gradually from fluorinated carbon to organic siloxane by changing the mixing ratio of HMDSO/Ar. Dielectric constant of the films ranged from 2–3.3. Thermal stability of the films, which was characterized by intensity loss of IR absorbance peak around 1000–1500 cm^–1 corresponding to C-F _n , Si-O-Si and Si-(CH₂)_n-Si bonds, was inferior to that from C₂F₄/HMDSO/Ar. In situ gasphase FT-IR spectroscopy revealed that there was a marked difference between the gas phase of C₄F₈/HMDSO/Ar and that of C₂F₄/HMDSO/Ar discharges. The IR spectrum of the former combination plasma contained a peak at 1250 cm^–1 with full width at half maximum as large as 150 cm^–1, which suggests that fluorocarbon particles and/or dusts are formed in the plasma. This suggests also that deposition precursors are not only CF _n (n = 1, 2, and 3) but also larger precursors such as C _x F _y (x > 1, y < 2x + 2) in C₄F₈/HMDSO/Ar discharges, which is presumably the cause of difference in thermal stability of the films prepared from C₄F₈/HMDSO/Ar and C₂F₄/HMDSO/Ar mixtures.     

Reexamination of the C2H4F potential surface. the status of the classical 2-fluoroethyl cation: a local minimum or transition structure?

According to ab initio molecular orbital calculations carried out with full geometry optimization at the MP2/6–31G^** level, the classical 2-fluoroethyl cation, FCH₂CH₂⁺, is a transition structure for H-scrambling in CH₃CHF⁺. Single point MP4/6–31G^** calculations at the optimized geometries predict the cyclic ethylene fluoronium ion to lie 24.2 kcal mol⁻¹ above CH₃CHF⁺ and 5.4 kcal mol⁻¹ below the 2-fluoroethyl cation. ΔG‡ for ring opening of the cyclic fluoronium ion at -60° is estimated to be ca 15 kcal mol⁻¹. This barrier is largely attributable to the powerful negative fluorine hyperconjugation in the transition state as described by Hoffmann and coworkers. When electron correlation effects are ignored a qualitatively different potential surface is obtained on which the 2-fluoroethyl cation is calculated to be a local minimum separated from the stable 1-fluoroethyl cation by an H-bridged transition state.     

Vibrational spectra,conformational stability,barriers to internal rotation,r0 structural parameters and ab initio calculations of fluoromethyl methyl ether

The far-infrared spectrum of gaseous fluoromethyl methyl ether, FCH₂OCH₃, along with three of the deuterium isotopes, has been recorded at a resolution of 0.10 cm^–1 in the 350 to 50 cm^–1 region. The fundamental asymmetric torsional and methyl torsional modes are extensively mixed and have been observed at 182 and 132 cm^–1, respectively, for the stablegauche conformer with the lower frequency band having several excited states falling to lower frequency. An estimate is given for the potential function governing the asymmetric rotation. On the basis of a one-dimensional model the barrier to internal rotation of the methyl moiety is determined to be 527±9 cm^–1 (1.51±0.03 kcal/mol). A complete assignment of the vibrational fundamentals for all four isotopic species observed from the infrared (3500 to 50 cm^–1) spectra of the gas and solid and from the Raman (3200 to 10 cm^–1) spectra of the gas, liquid, and solid is proposed. No evidence could be found in any of the spectra for the high-energytrans conformer. All of these data are compared to the corresponding quantities obtained from ab initio Hartree-Fock gradient calculations employing the 3-21G and 6-31G* basis sets along with the 6-31G* basis set with electron correlation at the MP2 level. Additionally, completer ₀ geometries have been determined from the previously reported microwave data and carbon-hydrogen distances determined from infrared studies. The heavy-atom structural parameters (distances in Å, angles in degrees) arer(C₁-F) = 1.395 ± 0.005;r(C₁-O) = 1.368 ± 0.007;r(C₂-O) = 1.426 ±0.003; FC₁O = 111.33 ± 0.25; C₁OC₂ = 113.50 ± 0.18 and dih FC₁OC₂ = 69.12 ± 0.26. All of these results are discussed and compared with the corresponding quantities obtained for some similar molecules.     

Modeling of serine protease prototype reactions with the flexible effective fragment potential quantum mechanical/molecular mechanical method

A complete cycle of chemical transformations for the serine protease prototype reaction is modeled following calculations with the flexible effective fragment quantum mechanical/molecular mechanical (QM/MM) method. The initial molecular model is based on the crystal structure of the trypsin–bovine pancreatic trypsin inhibitor complex including all atoms of the enzyme within approximately 15–18 Å of the oxygen center O of the catalytic serine residue. Several selections of the QM/MM partitioning are considered. Fractions of the side chains of the residues from the catalytic triad (serine, histidine and aspartic acid) and a central part of a model substrate around the C–N bond to be cleaved are included into the QM subsystem. The remaining part, or the MM subsystem, is represented by flexible chains of small effective fragments, whose potentials explicitly contribute to the Hamiltonian of the QM part, but the corresponding fragment–fragment interactions are described by the MM force fields. The QM/MM boundaries are extended over the C–C bonds of the peptides assigned to the QM subsystem in the enzyme, C–C and C–N bonds in model substrates. Multiple geometry optimizations have been performed by using the RHF/6-31G method in the QM part and OPLSAA or AMBER sets of MM parameters, resulting in a series of stationary points on the complex potential-energy surfaces. All structures generally accepted for the serine protease catalytic cycle have been located. Energies at the stationary points found have been recomputed at the MP2/6-31+G^* level for the QM part in the protein environment. Structural changes along the reaction path are analyzed with special attention to hydrogen-bonding networks. In the case of a model substrate selected as a short peptide CH₃(NHCO-CH₂)₂ – HN–CO–(CH₂–NHCO)CH₃ the computed energy profile for the acylation step shows too high activation energy barriers. The energetics of this rate-limiting step is considerably improved, if more realistic model for the substrate is considered, following the motifs of the ThrI11–GlyI12–ProI13-–CysI14–LysI15–AlaI16–ArgI17–IleI18–IleI19 sequence of the bovine pancreatic trypsin inhibitor.     

Synthesis of hexylthiols C6H13SH−1/1, 2, 3, 4−14C1/4/' /1-thiol[35S]/ and C6H13SH−2/1, 2, 3, 4−14C1/4/, /2-thiol[35S]/

A synthesis of¹⁴C and³⁵S double labelled hexylthiols: C₆H₁₃SH–1/1, 2, 3, 4–¹⁴C_1/4/, /1-thiol[³⁵S]/ and C₆H₁₃SSH–2/1, 2, 3, 4–¹⁴C_1/4/, /2-thiol[³⁵S]/ based on H₂ ³⁵S and C₆H₁₂–/1, 2, 3, 4–¹⁴C_1/4/ has been developed and described.     

Quantum-Chemical Study of Alkyl Carbenium Ions in 100% Sulfuric Acid

A quantum-chemical study of neutral and protonated monoalkyl sulfates RHSO₄and [RH₂SO₄]⁺(where R = CH₃, C₂H₅, iso-C₃H₇, and tert-C₄H₉) is carried out. Calculations are performed using the Hartree–Fock method in the 6-31G** and 6-31++G** basis sets taking into account electron correlation according to the Müller–Plesset perturbation theory MP2/6-31+G*//6-31+G*. Protonated tert-butyl sulfate was also calculated by the DFT B3LYP/6-31++G** method. It was found that monoalkyl sulfates are covalent compounds, and the complete abstraction of alkyl carbenium ions from them has substantial energy cost: 196.4, 161.7, 150.8 and 136.0 kcal/mol, respectively. Protonated methyl and ethyl sulfates are also covalent compounds according to the calculation. They have lower but still high energies of heterolytic dissociation (65.0 and 33.5 kcal/mol, respectively). The energy of R⁺abstraction from protonated isopropyl sulfate is much lower: 23.6 kcal/mol. The main covalent state and the ion–molecular pair, which is a carbenium ion [C(CH₃)₂H]⁺solvated by the H₂SO₄molecule, have about the same energy. The ground state of protonated tert-butyl sulfate corresponds to the ion–molecular complex [C(CH₃)⁺ ₃H₂SO₄] with still lower energy of carbenium ion [C(CH₃)₃]⁺abstraction, which is equal to 10.0 kcal/mol. Calculation according to the DFT B3LYP/6-31++G** method shows the absence of a minimum for the protonated tert-butyl sulfate with a covalent structure on the potential energy surface.     

Spectra of optical phonons and low-energy electronic transitions in C60/TMPD and C60/TPA single crystals

Single Crystals of C₆₀/TMPD and C₆₀/TPA have been grown from a chlorobenzene solution. Optical transmission spectra of single crystals of fullerene complexes withN,N,N,N-tetramethyl-p-phenylenediamine (TMPD) and triphenylamine (TPA) are studied in the spectral range from 600 to 16000 cm^–1. Splitting of the intramolecular vibration of C₆₀ is observed at 1428 cm^–1, which is likely caused by freezing of the rotation of the C₆₀ molecules due to their interaction with amines. Single crystals of C₆₀/TMPD differ from those of C₆₀/TPA by a decrease in the vibration frequency at 1428 cm^–1, vibrations of the C-C bonds of the TMPD molecule, and the redistribution of the forces of the oscillators of the vibrations of the C-N bonds. These peculiarities are interpreted to be the result of partial electron transfer from TMPD to C₆₀ in the C₆₀/TMPD single crystals. The electron transfer in the C₆₀/TPA system is less pronounced.Translated fromIzvestiya akademii Nauk. Seriya Khimicheskaya, No. 6, pp. 1459–1464, June, 1996     

Synthesis, structure and DNA binding studies of mononuclear copper(II) complexes with mixed donor macroacyclic ligands, 2,6-bis({N-[2&3-(phenylselenato)alkyl]}benzimidoyl)-4-methylphenol

Two new phenol based macroacyclic Schiff base ligands, 2,6-bis({N-[2-(phenylselenato)ethyl]}benzimidoyl)-4-methylphenol (bpebmpH, 1) and 2,6-bis({N-[3-(phenylselenato)propyl]}benzimidoyl)-4-methylphenol (bppbmpH, 2) of the Se₂N₂O type have been prepared by the condensation of 4-methyl-2,6-dibenzoylphenol (mdbpH) with the appropriate (for specific reactions) phenylselenato(alkyl)amine. These ligands with Cu(II) acetate monohydrate in a 2:1 molar ratio in methanol form complexes of the composition [(C₆H₂(O)(CH₃){(C₆H₅)CN(CH₂)_nSe(C₆H₅)}{(C₆H₅)CO}₂Cu] (3 (n = 2), 4 (n = 3)) with the loss of phenylselenato(alkyl)amine and acetic acid. In both these complexes, one arm of the ligand molecule undergoes hydrolysis, and links with Cu(II) in a bidentate (NO) fashion, as confirmed by single crystal X-ray crystallography of complex 3. The selenium atoms do not form part of the copper(II) distorted square planar coordination sphere which has a trans-CuN₂O₂ core. The average Cu–N and Cu–O distances are, respectively, 1.973(3) and 1.898(2) Å. The N–Cu–N and O–Cu–O angles are, respectively, 167.4(11)° and 164.5(12)°. The compounds 1–4 have been characterized by elemental analysis, conductivity measurements, mass spectrometry, IR, electronic, ¹H and ⁷⁷Se{¹H} NMR spectroscopy and cyclic voltammetry. The interaction of complex 3 with calf thymus DNA has been investigated by a spectrophotometric method and cyclic voltammetry.     

H NMR Dynamic study of thermal Z/E isomerization of 5-substituted 2-alkylidene-4-oxothiazolidine derivatives: Barriers to rotation about CC bond

The rotational barriers between the configurational isomers of two structurally related push–pull 4-oxothiazolidines, differing in the number of exocyclic CC bonds, have been determined by dynamic ¹H NMR spectroscopy. The equilibrium mixture of (5-ethoxycarbonylmethyl-4-oxothiazolidin-2-ylidene)-1-phenylethanone (1a) in CDCl₃ at room temperature to 333 K consists of the E- and Z-isomers which are separated by an energy barrier ΔG^# 98.5 kJ/mol (at 298 K). The variable-temperature ¹H NMR data for the isomerization of ethyl (5-ethoxycarbonylmethylidene-4-oxothiazolidin-2-ylidene)ethanoate (2b) in DMSO-d₆, possessing the two exocyclic CC bonds at the C(2)- and C(5)-positions, indicate that the rotational barrier ΔG^# separating the (2E,5Z)-2b and (2Z,5Z)-2b isomers is 100.2 kJ/mol (at 298 K). In a polar solvent-dependent equilibrium the major (2Z,5Z)-form (>90%) is stabilized by the intermolecular resonance-assisted hydrogen bonding and strong 1,5-type S · · · O interactions within the SCCCO entity. The ¹³C NMR Δδ_C(2)C(2′) values, ranging from 58 to 69 ppm in 1a–d and 49-58 ppm in 2a–d, correlate with the degree of the push-pull character of the exocyclic C(2)C(2′) bond, which increases with the electron withdrawing ability of the substituents at the vinylic C(2′) position in the following order: COPh COEt > CONHPh > CONHCH₂CH₂Ph. The decrease of the Δδ_C(2)C(2′) values in 2a–d has been discussed for the first time in terms of an estimation of the electron donor capacity of the S fragment on the polarization of the CC bonds.     

An ab initio study of the structures and enthalpies of the hydrogen-bonded complexes of the acids H2O,H2S,HCN, and HCl with the anions OH−, SH−, CN−, and Cl−

Ab initio calculations at second-order Møller-Plesset perturbation theory with the 6-31 + G(d,p) basis set have been performed to determine the equilibrium structures and energies of a series of negative-ion hydrogen-bonded complexes with H₂O, H₂S, HCN, and HCl as proton donors and OH^–, SH^–, CN^–, and Cl^– as proton acceptors. The computed stabilization enthalpies of these complexes are in agreement to within the experimental error of 1 kcal mol^–1 with the gas-phase hydrogen bond enthalpies, except for HOHOH^–, in which case the difference is 1.8 kcal mol^–1. The structures of these complexes exhibit linear hydrogen bonds and directed lone pairs of electrons except for complexes with H₂O as the proton donor, in which cases the hydrogen bonds deviate slightly from linearity. All of the complexes have equilibrium structures in which the hydrogen-bonded proton is nonsymmetrically bound, although the symmetric structures of HOHOH^– and ClHCl^– are only slightly less bound than the equilibrium structures. MP2/6-31 + G(d,p) hydrogen bond energies calculated at optimized MP2/B-31 + G(d,p) and at optimized HF/6-31G(d) geometries are similar. Using HF/6-31G(d) frequencies to evaluate zero-point and thermal vibrational energies does not introduce significant error into the computed hydrogen bond enthalpies of these complexes provided that the hydrogen-bonded proton is definitely nonsymmetrically bound at both Hartree-Fock and MP2.     

Structures and energies of CnS (1 ≤ n ≤ 20) sulphur carbide clusters

C_nS (1 ≤ n ≤ 20) clusters have been investigated by means of the density functional theory. As a general rule, when 1 ≤ n ≤ 17 the energetically most favorable isomers are found to be the linear arrangement of nuclei (C_∞v) with the sulphur atom at the very end of the carbon chain. The electronic ground state is alternately predicted to be ¹∑⁺ for odd n or ³∑⁻ for even n with a conspicuous odd–even effect in the stability of these clusters. The C₁₈S cluster is predicted to have a S-capped monocyclic structure (¹A₁), but with a low barrier to linearity. On the other hand, C₁₉S and C₂₀S are unambiguously linear in the ¹∑⁺ and ³∑⁻ electronic ground states, respectively.     

Chiral functionalized bisphosphine ligands: Transition metal complexes of 1,2-bis(tert-Butylchlorophosphino)-1,2-dicarba-closo-dodecaborane(12)

When rac- or meso-1,2-bis(tert-butylchlorophosphino)-1,2-dicarba-closo-dodecaborane(12) (1a or 1b) is reacted with [M(CO)₄(NBD)] (M = Cr, Mo, NBD = norbornadiene), [Mo(CO)₄(EtCN)₂] or [W(CO)₆], rac-[Cr(CO)₄{1,2-(P^tBuCl)₂C₂B₁₀H₁₀}] (2), rac- or meso-[Mo(CO)₄{1,2-(P^tBuCl)₂C₂B₁₀H₁₀}] (3a or 3b) and rac-[W(CO)₄{1,2-(P^tBuCl)₂C₂B₁₀H₁₀}] (4) could be isolated as pure diastereomers. UV irradiation of 1 with [Cr(CO)₆] in moist THF proceeds with hydrolysis and formation of [Cr(CO)₄{1,2-(P(OH)^tBu)₂C₂B₁₀H₁₀}] (5) which contains the metal complex-stabilized phosphinous acid. Compounds 2–5 were characterized spectroscopically (¹H, ³¹P, ¹¹B, ¹³C NMR), by mass spectrometry and by X-ray structure determination.     

Synthesis ofcloso-3,3-(η3,η2-tricyclo[5.2.1.02,6]deca-4, 8-diene-3-yl)-1-(hydroxymethyl)-3,2,1-dicarbollylrhodium and the crystal structure of its dinier with the O-H...Rh bond

Protonation of the [closo-3,3-(⁴-C₁₀H₁₂)-1-(CH₂OH)-3,1,2-RhC₂B₉H₁₀]^– PPN⁺ (C₁₀H₁₂ — dicyclopentadiene, PPN⁺ — bis(triphenylphosphine)iminium cation) at the ethylene bond of the norbornene moiety yields the neutralcloso-3,3,3-(-C₁₀H₁₃)-1-(CH₂OH)-3,1,2-RhC₂B₉H₁₀ with an agostic C-H...Rh bond. On prolonged storage in EtOH, the latter complex is converted intocloso-3,3-(^3,2-C₁₀H₁₁)-1-(CH₂OH)-3,1,2-RhC₂B₉H₁₀ with -allylolefinic type coordination. Its crystal structure as dimeric aggregates with O-H...O and O-H...Rh bonds was determined by X-ray diffraction.Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 4, pp. 776–778, April, 1995.     

Determination of C4–C14 carboxylic acids by capillary zone electrophoresis: Application to the identification of diamide degradation products and partitioning studies

Capillary zone electrophoresis (CZE) was investigated for the determination of linear saturated carboxylic acid homologues ranging from C₄ to C₁₄. Separation conditions were optimised to overcome the problems of decreasing solubility and decreasing selectivity between successive homologues with increasing chain length. Separations were performed at 20°C, using a 20 kV separation voltage and a pH 8 electrolyte containing 30% methanol. A suitable chromophore (4-aminobenzoate) was added to ensure indirect UV detection of the analytes. Calibration curves and repeatability were established. Minimum detectable concentrations of 3·10⁻⁶ mol l⁻¹ were achieved. Resolution between successive homologues was better than 2. The electrophoretic mobility of each homologue (n=7–14) was assessed and a quasi-linear relationship between the mobility value and 1/n was observed. The quantitative analysis of a diamide degradation solution was performed and compared to potentiometric results. The CZE method was also applied to the determination of C₇–C₁₄ partitioning between an organic medium containing tributylphosphate in n-dodecane and different basic solutions. Their behaviour was established according to the chain length and the pH of the aqueous phase. For C₁₀–C₁₄ compounds, results were validated by comparison with gas chromatographic analysis of the organic phases.     

Compounds of nickel(II) with 5SR,7RS,12SR,14SR-5,12-dimethyl-7,14-diphenyl-1,4,8,11-tetraazacyclotetradecane, rmL: The structures of [Ni(rmL)](ClO4)2 · 0.5H2O and cis-[Ni(rmL)(acac)]ClO4

The imine functions of [Ni(mL¹)](ClO₄)₂ (mL¹ = meso-7RS,14SR-5,12-dimethyl-7,14-diphenyl-1,4,8,11-tetraazacyclotetradeca-4,11-diene) are reduced by using NaBH₄ in acetonitrile/methanol to form the meso–meso and rac–meso isomeric cyclic tetramine complex cations [Ni(mmL²)]²⁺ and [Ni(rmL²)]²⁺ (mml² = 5RS,7RS,12SR,14SR- and rmL² = 5SR,7RS,12SR,14SR-5,12-dimethyl-7,14-diphenyl-1,4,8,11-tetraazacyclotetradecane) in ca. 8:1 proportions. [Ni(rmL²)]²⁺ is also prepared from rmL², formed in <1% yield by the reduction of mL¹ by NaBH₄ in ethanol. Square planar singlet ground state (S = 1) salts [Ni(rmL²)](ClO₄)₂ and [Ni(rmL²)][ZnCl₄] and triplet ground state (S = 3) trans-di-ligand octahedral compounds trans-[Ni(rmL²)X₂] ,μ-Y-trans-[Ni(rmL²)Y] and folded macrocycle compounds cis-[Ni(rmL²)(acac)]CIO₄ (acac⁻ = pentane-2,4-dionato), cis-[{Ni(rmL²)}₂(C₂O₄)](ClO₄)₂, cis-[Ni(rmL²)(H₂O)₂](ClO₄)₂ and cis-[Ni(rmL²)X₂], X⁻ = Cl⁻, Br⁻, are described. The S = 1 salt 1SR,4SR,5SR,7RS,8RS,11RS,12SR,14SR-[Ni(rmL²)](ClO₄)₂ · 0.5H₂O has a disordered structure with Ni(II) in square planar coordination by the nitrogen atoms of the macrocycle, in N-configuration III, with Ni–N_mean = 1.96(2) Å. The six-membered chelate rings both have chair conformations, with the phenyl substituents equatorially oriented and with the methyl substituents disordered over axial and equatorial orientations. The S = 3 compound cis-1SR,4SR,5SR,7RS,8SR,11SR,12SR,14SR-[Ni(rmL²)(acac)]ClO₄ has N-configuration V. The macrocycle is folded along N¹–Ni–N⁸, adjacent to the phenyl substituents {N1–Ni–N8 = 176.45(6), N4–Ni–N11 = 98.16(6)°}, with mean Ni–N = 2.09(2) Å and mean Ni–O = 2.121(5) Å. Both six-membered chelate rings have chair conformations with the methyl substituents equatorially oriented, while one has the phenyl substituent equatorially and the other has it axially oriented. The structures of the isomeric [M(rmL²)(acac)]ClO₄, [M(rrL²)(acac)]CIO₄ and [M(mmL²)(acac)]ClO₄ compounds are compared.     

The structure and dynamic properties of mixed adsorption and penetration layers of α-dipalmitoylphosphatidylcholine/β-lactoglobulin at water/fluid interfaces

The interfacial tensions of mixed α-dipalmitoylphosphatidylcholine (DPPC)/β-lactoglobulin layers at the chloroform/water interface have been measured by the pendent drop and drop volume techniques. In certain intervals, the adsorption kinetics of these mixed layers was strongly influenced by the concentrations of both protein and DPPC. However, at low protein concentration, C_{β-lactoglobulin}=0.1 mg l⁻¹, the adsorption rate of mixed interfacial layers was mainly controlled by the variation of the DPPC concentration. As C_{β-lactoglobulin} was increased to 0.8 mg l⁻¹, the interfacial activity was abruptly increased, and within the concentration range of C_DPPC=10⁻⁴–10⁻⁵ mol l⁻¹, the DPPC has very little effect on the whole adsorption process. In this case, the adsorption rate of mixed layers was mainly dominated by the protein adsorption. This phenomenon also happened as the protein concentration was further increased to 3.6 mg l⁻¹. When C_DPPC>3 · 10^–5 mol l⁻¹, the adsorption behaviour was very similar to that of the pure DPPC although the protein concentration was changed. The equilibrium interfacial tensions of the mixed layers are dramatically effected by the lipid as compared to the pure protein adsorption at the same concentration. It reveals the estimation of which composition of lipid and protein decreases the interfacial tension. The combination of Brewster angle microscopy (BAM) with a conventional LB trough was applied to investigate the morphology of the mixed DPPC/β-lactoglobulin layers at the air/water interface. The mixed insoluble monolayers were produced by spreading the lipid at the water surface and the protein adsorbed from the aqueous buffer subphase. The BAM images allow to visualise the protein penetration and distribution into the DPPC monolayer on compression of the complex film. It is shown that a homogeneous distribution of β-lactoglobulin in lipid layers preferentially happens in the liquid fluid state of the monolayer while the protein can be squeezed out at higher surface pressures.