3-Substituted Sydnone Derivatives. Structures of 3-Cyclohexylsydnone and of Two Forms of 3-(3-Pyridyl)sydnone

The crystal and molecular structures of three sydnone derivatives are reported. The compound 3-cyclohexylsydnone crystallizes in space group C2/c of the monoclinic system with sixteen molecules in a cell of dimensions a = 19.326 (3), b = 9.471 (2), c = 20.005 (4)Å, β = 106.85(1)°. The structure has been refined to a final value of 0.0581 for the conventional R-factor based on 2222 independent observed intensities. Form I of 3-(3-pyridyl)sydnone crystallizes in space group P2/n of the monoclinic system with eight molecules in a cell of dimensions a = 7.317(2), b = 9.283 (2), c = 20.891 (6) Å, β = 99.61(2)°. The structure has been refined to a final value of 0.0514 for the conventional R-factor based on 1208 independent observed intensities. Form II of 3-(3-pyridyl)sydnone crystallizes in space group P2₁/c of the monoclinic system with eight molecules in a cell of dimensions a=9.073 (2), b = 22.267 (5). c = 7.494(2)Å, β = 112.15 (2)°. The structure has been refined to a final value of 0.0462 for the conventional R-factor based on 1330 independent observed intensities. Each of the three structures contains two crystallographically independent molecules in the cell. In the case of 3-cyclohexylsydnone, one of the independent molecules exhibits disorder around the exocyclic bond at N(3). A comparison of bond lengths indicates that the (electron donating) cyclohexyl group brings about enhanced electron density in the N(3)-C(4) bond, and possibly in the N(3)-N(2) bond. All three structures studied here exhibit intermolecular hydrogen bonding involving C(4)-H(4)…O(6) interactions. Although there are no stacking interactions in the cyclohexyl derivative, there is evidence for such interactions in the 3-pyridyl derivatives.     

The crystal structure and conformation of N-[2,2-dimethyl-3-(2-methylpropenyl)- cyclopropylcarbonyl]-5-methylisoxazolin-3-one

The title compound has been synthesized and its crystal structure was determined by X-ray crystallographic method. The crystal is triclinic, space group P-1, with unit cell dimensions a = 6.146 (5), b = 8.473(6), c = 14.383(5) Å; α = 77.47 (4), β = 82.84 (4), γ = 69.00 (8)° and Z = 2. The results obtained reveal that the molecule of the title compound keeps a long conjugative system involving CC double bond, cyclopropane ring, carbonyl group and isoxazolinone ring and adopts a low energy conformation including s-trans of CC double bond, s-cis of carbonyl group with respect to the three-membered ring and like-s-trans of carbonyl group with the carbonyl group within the heterocyclic moiety.     

(E)‐2‐[2‐(1‐Naphthyl)­vinyl]‐3‐tosyl‐2,3‐di­hydro‐1,3‐benzo­thia­zole

The title compound, C₂₆H₂₁NO₂S₂, which consists of a benzo­thia­zole skeleton with α‐naphthyl­vinyl and tosyl groups at positions 2 and 3, respectively, was prepared by palladium–copper‐catalyzed heteroannulation. The E configuration of the mol­ecule about the vinyl C=C bond is established by the benzothiazole–naphthyl C—C—C—C torsion angle of 177.5 (4)°. The five‐membered heterocyclic ring adopts an envelope conformation with the Csp³ atom 0.380 (6) Å from the C₂NS plane. The two S—C [1.751 (4) and 1.838 (4) Å] and two N—C [1.426 (5) and 1.482 (5) Å] bond lengths in the thia­zole ring differ significantly.     

5′‐Allyl‐2′‐benzoyloxy‐3′‐methoxy‐4‐nitroazobenzene

The structure of the title compound, 4‐allyl‐2‐methoxy‐6‐[(4‐nitrophenyl)diazenyl]phenyl benzoate, C₂₃H₁₉N₃O₅, displays the characteristic features of azobenzene derivatives. The azobenzene moiety of the molecule has a trans configuration and in this moiety, average C—N and N=N bond lengths are 1.441 (3) and 1.241 (3) Å, respectively.     

Synthesis and Crystal Structure of 2,3-Diethoxycarbonyl-4-phenyl-5-morpholinyl Thiophene

1INTRoDUCTIONa-Thiocarbonylthioformamidesweresynthesizedin198o[l~2i,however,thereisnoreportofthesecompoundsconcerningtheirpropertiesandreactionactivitiest33.Accordingtotheirstructure,theyseemtohavereactionwithdienophi1es,likesubsti-tutedolefinicandacetylenicdienophilestoleadcorrespondingDiels-Alderproduct.xylene(15ml),diethylbutynedioicester(O.2g,1.2mmol)wasadded,themix-turewasrefluxedfor20h,thencooledtoroomtemperatureandconcentrated.Theresiduewaspurifiedbysilicagelcolumnusingacetone/petr…     

The synthesis and crystal structure of α-perthionaphthoatopyridinecopper(I) dimer Cu2(α-C10H7CSS2)2(Py)2

The title compound has been synthesized by the reaction of α-dithionaphthoic acid with CuCl₂ in pyridine or by recrystallizing Cu₄(α-C₁₀H₇CSS₂)₄ ? 1/2CS₂ in a mixture of pyridine and alcohol. The structure of the title compound is determined by a single-crystal X-ray diffraction analysis. The crystal belongs to triclinic space group with unit cell parameters: a=7.085(2)Å, b= 8.672(3)Å and c=13.598(5)Å; a=92.40(3)°, β=102.59(4)° and γ=105.67(4)°; V=780.6Ų; Z=1. The structure was refined to R=0.058 for 2390 reflections. The molecule of the title compound sits on a center of symmetry. The shorter Cu—Cu bond length (2.606Å) shows considerable interaction between copper atoms. If the Cu—Cu interaction is ignored, the neighbouring S and N atoms are coordinated to copper atom in a configuration of distorted tetrahedron.     

Molekül- und Kristallstruktur von 9λ4-Thia-2,4,6,8,10,11-hexaza-1λ5,3λ5,5λ5,7λ5-tetraphosphabicylo[5.3.1]undeca-1,3,5,7(11),8,9-hexaen,einem schwefeldiimidoüberbrückten Cyclotetraphosphazen

Molecular and Crystal Structure of 9λ⁴-Thia-2,4,6,8,10,11-hexaaza-1λ⁵,3λ⁵,5λ⁵,7λ⁵-tetraphosphabicylo[5.3.1]undeca-1,3,5,7(11),8,9-hexaene, Cyclotetraphosphazene Bridged by a Sulfur Diimide Group We have carried out an X-ray structure analysis of the title compound ( 1 ). 1 crystallizes in the monoclinic space group P2₁/b with a = 9.436(4), b = 20.102(7), c = 11.622(5) Å, γ = 103.52(8)°, Z = 8. There are two molecules in the asymmetric unit, which in approximation can be transformed one into the other by additional symmetry elements of a substructure of a space group B2/b. The S = N bond lengths are 1.53 Å. The P? N bonds connecting the SN₂ system are 1.666 Å long. They are significantly longer than the P? N multible bonds in the P₄N₄ ring within a range of 1.517 to 1.565 Å. The sulfur diimide unit and its substituents are coplanar causing a half-boat conformation of the heterocyclic six membered ring. The cyclotetraphosphazene ring shows a flattened crown-saddle conformation, the phosphorous atoms arranged nearly at the corners of a square. Influenced by crystal packing there exist small deviations from the molecular mirror plane and also differences in conformation between the two molecules of the asymmetric unit.     

N‐(p‐Chloro­phenyl)‐3,3‐di­phenyl‐4‐(β‐phenyl­styryl)azetidin‐2‐one

In the title compound, C₃₅H₂₆ClNO, the four‐membered β‐lactam ring is essentially planar, with a maximum deviation of 0.012 (1) Å for the N atom. The C—C bond lengths in the β‐lactam ring are 1.591 (2) and 1.549 (2) Å. The two phenyl rings attached to the β‐lactam ring are nearly perpendicular to each other [83.2 (1)°].     

Über Chalkogenolate. 191. Ester der 2-Oxophenyldithioessigsäure 2. Kristall- und Molekülstruktur des Methylesters

On Chalcogenolates. 191. Esters of 2-Oxophenyldithioacetic Acid. 2. Crystal and Molecular Structure of the Methyl Ester The title compound C₆H₅? CO? CS? SCH₃ crystallizes with Z = 2 in the triclinic space group P1 with cell dimensions (?60°C) a = 6.236(4) Å, b = 7.972(2) Å, c = 9.589(4) Å, α = 88.42(3)°, β = 75.39(5)°, γ = 81.54(4)°. The structure has been determined from single crystal X-ray data measured at ?60°C and refined to R = 0.085 and R_w = 0.087 for 2307 independent reflections. With nearly 20° the C?O bond is turned out of the plane of the phenyl ring.     

The seven‐membered nickelacycle [NiBr{o‐CH=C(CF3)C6H4CH2PPh2‐κ2C,P}{PPh(CH2Ph)2}]

The crystal and molecular structures of the title compound, 3‐bromo‐3‐(di­benzyl­phenyl­phospho­nio)‐2,2‐di­phenyl‐5‐trifluoromethyl‐1H‐benzo­[e][1,2]­phosphanickelepine, [NiBr(C₂₂H₁₇F₃P)(C₂₀H₁₉P)], which was obtained as the major regioisomer from insertion of HCCCF₃ into the Ni—C bond of the five‐membered phosphanickelacycle [NiBr(o‐C₆H₄CH₂PPh₂‐κ²C,P){PPh(CH₂Ph)₂}], have been determined. Principal geometric data include the Ni—X bond lengths Ni—Br 2.3343 (4) Å, Ni—P 2.1867 (7) and 2.2094 (7) Å, and Ni—C 1.882 (3) Å, and the two trans angles P—Ni—P 171.55 (3)° and Br—Ni—C 176.88 (9)°.     

Intra‐ and intermolecular Se...X (X = Se,O) interactions in selenium‐containing heterocycles: 3‐benzoylimino‐5‐(morpholin‐4‐yl)‐1,2,4‐diselenazole

In the selenium‐containing heterocyclic title compound {systematic name: N‐[5‐(morpholin‐4‐yl)‐3H‐1,2,4‐diselenazol‐3‐ylidene]benzamide}, C₁₃H₁₃N₃O₂Se₂, the five‐membered 1,2,4‐diselenazole ring and the amide group form a planar unit, but the phenyl ring plane is twisted by 22.12 (19)° relative to this plane. The five consecutive N—C bond lengths are all of similar lengths [1.316 (6)–1.358 (6) Å], indicating substantial delocalization along these bonds. The Se...O distance of 2.302 (3) Å, combined with a longer than usual amide C=O bond of 2.252 (5) Å, suggest a significant interaction between the amide O atom and its adjacent Se atom. An analysis of related structures containing an Se—Se...X unit (X = Se, S, O) shows a strong correlation between the Se—Se bond length and the strength of the Se...X interaction. When X = O, the strength of the Se...O interaction also correlates with the carbonyl C=O bond length. Weak intermolecular Se...Se, Se...O, C—H...O, C—H...π and π–π interactions each serve to link the molecules into ribbons or chains, with the C—H...O motif being a double helix, while the combination of all interactions generates the overall three‐dimensional supramolecular framework.     

Hydrothermal Synthesis of Brucite Type Copper Hydroxide Squarate [Cu3(OH)2(C4O4)]·4H2O

Herein we report synthesis of a new brucite type copper hydroxide squarate, Cu₃(OH)₂(C₄O₄)₂·4H₂O [P2₁/c, a = 5.6437(4) Å, b = 12.8357(9) Å, c = 9.1507(6) Å, β = 95.892(1)° and Z = 2] by hydrothermal method, and its characterization by single crystal diffraction analysis as well as by IR spectroscopy. The rather wide spread of Cu–O bond lengths, can be primarily rationalised by the Jahn‐Teller effect, and secondarily by the connectivities of the CuO₆ octahedra.     

Die Strukturen der mittleren Ringverbindungen. XII. Kristallstruktur der 1,1,5,5-Tetramethylcyclodecan-8-carbonsäure

Crystals of 1,1,5,5-tetramethylcyclodecane-8-carboxylic acid are monoclinic, a = 9.22 Å, b = 14.81 Å, c = 11.58 Å, β = 111° 0′, space group P2₁/c with 4 molecules in the unit cell. The structure has been solved by direct methods and refined by full-matrix least-squares analysis of three-dimensional intensitiy data. The conformation of the ring differs from the previously observed cyclodecane conformation, but the detailed results are abnormal in a number of ways (extremely short C? C bond lengths, wide C? C? C bond angles, large temperature factors). The possibility is discussed that the crystal structure is disordered.     

N-PHOSPHORYL AMINO ACIDS AND PEPTIDES: PART I. THE CRYSTAL AND MOLECULAR STRUCTURE OF N-(O,O-DIISOPROPYL PHOSPHORYL)-TRANS-4-HYDROXY-D,L-PROLINE

Abstract

The crystal and molecular structure of N-(O,O-diisopropyl phosphoryl)-trans-4-hydroxy-D,L-proline has been determined by X-ray diffraction analysis and is compared with proline or hydroxyproline residue in a peptide chain described in the literature. The compound crystallized in orthorhombic system with space group P2₁2₁2₁, a=6.934(2), b=8.694(3), c=26.727(7) Å, V=1611.3(8) ų, Z=4, Dx=1.22 g/cm³. The structure was solved by direct method and refined by anisotropic least squares to a discrepancy index R=0.072. In the compound, the nitrogen atom is trigonal and its remaining 2p orbital is conjugated with the P?Oπ system; the conformation of the phosphorimidate function is favoured by the trans orientation of the P=O bond with respect to the N-C4 bond. In the pyrrolidine ring moeity, the C2-C1-N-C4 atoms are nearly copolnar and the C3 atom is out of the plane by about 0.47 Å.     

The synthesis and crystal structure of a trinuclear molybdenum cluster compound [Mo3(μ-O)(μ-S)3(μ(μ-OAc)2(dtp)2·(Py)]·0.5H2O

[Mo₃,OS₃(dtp)₄(H₂O)] reacts with NaOAc·3H₂O in Py to give the title compound. The crystal data are as follows: [Mo₂OS₃)(OAc)₂(dtp)₂·Py]?0.5H,O(dtp = [S₃P(OC₂H₅)₂]^?, Py = C₅H₅N); M = 976.64; triclinic; space group P1 ; a=11.704(5), b=14.169(7), c= 11.688 (5) Å α=109.94(4) β = 91.53(4), γ = 91.93(4)°; V= 1819(1) Ų; Z=2; D_c = 1.78 g·cm^?3 λ(Mo Kα) = 0.71069 Å μ=15.15 cm^?1; F(000) = 970 T=296 K; final R=0.071 for 1652 reflections with I>3σ(I). In the molecule, the [Mo₃OS₃] core is surrounded by two bridging OAc groups and two terminal chelate dtp groups attached to the {Mo₃} triangle in a symmetric style, and the Py ligand is coordinated to the Mo atom at the apex of {Mo₃} triangle with the nitrogen. This novel configuration is obtained for the first time with Mo—N bond length being 2.27 (2) Å and three Mo—Mo bond lengths 2.584 (4), 2.587 (4) and 2.657(4) Å, respectively. As a whole, the molecule has a virtual C₂ symmetry.     

The crystal and molecular structure of 3,5-Di-(t-butyl)-1-phenylphosphoryl-4-aza-2,5-cyclohexadiene

The crystal and molecular structure of the title compound (C₁₈H₂₆NOP) has been determined by a single crystal, x-ray diffraction study using Cu-Kα. radiation. The compound was found to crystallize in the orthorhombic space group Pnma with unit cell constants a = 12.686 ± .001 Å, b = 14.776 ± .001 Å, and c = 9.540 ± .001 Å. The structure was solved by the heavy atom method and refined by block-diagonal least-squares to a final R = 0.09₉ for the 696 statistically significant reflections. The compound exhibits orientational disorder in the crystalline state. Nevertheless, the planarity of this ring; the lengthening of the diene carbon-carbon bond to 1.41 Å the resultant shortening of both the carbon-nitrogen bond (1.43 Å) and the carbon-phosphorus bond (1.74 Å), and the CNC bond angle of 121° all strongly support the assumption of delocalization of the diene π-electrons within the heterocyclic ring system.     

4‐Fluoro‐2‐(phospho­no­methyl)­benzene­sulfonic acid monohydrate

The title compound, C₇H₈FO₆PS·H₂O, contains both phospho­nic and sulfonic acid functionalities. An extensive network of O—H?O hydrogen bonds is present in the crystal structure. The three acidic protons are associated with the phospho­nate group. Two protons experience typical hydrogen‐bond contacts with the sulfonate‐O atoms, while the third has a longer covalent bond of 1.05 (3) Å to the phospho­nate‐O atom and a short hydrogen‐bond contact of 1.38 (3) Å to the water O atom (all O—H?O angles are in the range 162–175°). The sulfonate group is positioned so that one S—O bond is nearly coplanar with the phenyl ring [torsion angle O—S—C—C ?8.6 (2)°]. The phospho­nate group is oriented approximately perpendicular to the ring [torsion angle P—C—C—C 99.2 (2)°] with one P—O bond anti to the benzyl C—C bond. The mol­ecules pack in layers in the b–c plane with the water mol­ecules in between adjacent pairs of inverted layers.     

Tetrapotassium dicarbonato­dioxo­peroxo­uranium(VI) 2.5‐hydrate,K4[U(CO3)2O2(O2)]·2.5H2O

The title compound was obtained by reacting UO₂ powder in 2 M K₂CO₃ with hydrogen peroxide. The compound contains individual [U(CO₃)₂O₂(O₂)]⁴⁻ ions, which are linked via an extended network of K atoms and hydrogen bonding. The U atom is coordinated to two trans‐axial O atoms and six O atoms in the equatorial plane, forming distorted hexagonal bipyramids. The carbonate ligands are bound to the U center in a bidentate manner, with U—O bond distances ranging from 2.438 (5) to 2.488 (5) Å. The peroxo group forms a three‐membered ring with the U atom, with U—O bond distances of 2.256 (6) and 2.240 (6) Å. The U=O bond distances of 1.806 (5) and 1.817 (5) Å, and an O—U—O angle of 175.3 (3)° are characteristic of the linear uranyl(VI) unit.     

Earth Alkaline Tetrathiosquarates: Syntheses and Crystal Structures of MgC4S4 · 6 H2O and CaC4S4 · 4 H2O

Concentrated aqueous solutions of magnesium chloride and calcium nitrate, respectively, allow on addition of the potassium salt of tetrathiosquarate, K₂C₄S₄ · H₂O, the isolation of the earth alkaline salts MgC₄S₄ · 6 H₂O ( 1 ) and CaC₄S₄ · 4 H₂O ( 2 ) as orange and red crystals. The crystal structure determinations ( 1 : monoclinic, C2/c, a = 17.2280(7), b = 5.9185(2), c = 13.1480(4) Å, β = 104.730(3)°, Z = 4; 2 : monoclinic, P2₁/m, a = 7.8515(3), b = 12.7705(5), c = 10.6010(4) Å, β = 93.228(2)°, Z = 4) show the presence of C₄S₄^2? ions with almost undistorted D_4h symmetry having average C–C and C–S bond lengths of 1.451Å and 1.659Å for 1 and 1.451Å and 1.655Å for 2 . The structure of 1 contains discrete, octahedral [Mg(H₂O)₆]²⁺ complexes. Several O–H····O and O–H····S bridges with H····O and H····S distances of less than 2.50Å connect cations and anions. The structure of 2 is built of concatenated, edge‐sharing Ca(H₂O)₆S₂ polyhedra. The Ca²⁺ ions have the coordination number eight, C₄S₄^2? act as a chelating ligands towards Ca²⁺ with Ca–S distances of 3.14Å. The infrared and Raman spectra show bands typical for the molecular building units of the two compounds.     

The preparation and crystal structure of trinuclear molybdenum compound (Me4N)[Mo3(μ3-O)(μ-Cl)3(μ-O2CH)3Cl3]

The title compound was prepared by the oxidation of MoCl₃ in liquid phase. The crystal belongs to the orthorhombic system with space group D-Pmnb and unit cell parameters: a = 11.403 (1), b = 12.345 (2), c = 14.292 (2) Å; V = 2011.8 ų; Z = 4, D_c = 2.396g/cm³. Altogether 2303 independent reflections were collected on a CAD-4 four-circle diffractometer with Mo Kα radiation in range 2° ≤ θ ≤ 27°. The crystal structure was solved by heavy-atoms method and refined by full-matrix least-squares technique to final discrepancy factors R = 0.050 and R_w= 0.056 for 1513 reflections of I ≥ 3σ (I). The configuration of the cluster anion was characterized to be of the same Ml type structure as presented in the previous paper. The average bond lengths of Mo—Mo and Mo-(μ₃-O) are 2.577 Å and 1.982 Å respectively. In addition, the effects of bridging atoms, other ligands and bond orders on Mo—Mo bonds are discussed briefly.