Is the μ‐Oxo‐μ‐Peroxodiiron Intermediate of a Ribonucleotide Reductase Biomimetic a Possible Oxidant of Epoxidation Reactions?

Density functional calculations on a mu-oxo-mu-peroxodiiron complex (1) with a tetrapodal ligand BPP (BPP=N,N-bis(2-pyridylmethyl)-3-aminopropionate) are presented that is a biomimetic of the active site region of ribonucleotide reductase (RNR). We have studied all low-lying electronic states and show that it has close-lying broken-shell singlet and undecaplet (S=0, 5) ground states with essentially two sextet spin iron atoms. In strongly distorted electronic systems in which the two iron atoms have different spin states, the peroxo group moves considerably out of the plane of the mu-oxodiiron group due to orbital rearrangements. The calculated absorption spectra of (1,11)1 are in good agreement with experimental studies on biomimetics and RNR enzyme systems. Moreover, vibrational shifts in the spectrum due to (18)O(2) substitution of the oxygen atoms in the peroxo group follow similar trends as experimental observations. To identify whether the mu-oxo-mu-1,2-peroxodiiron or the mu-oxo-mu-1,1-peroxodiiron complexes are able to epoxidize substrates, we studied the reactivity patterns versus propene. Generally, the reactions are stepwise via radical intermediates and proceed by two-state reactivity patterns on competing singlet and undecaplet spin state surfaces. However, both the mu-oxo-mu-1,2-peroxodiiron and mu-oxo-mu-1,1-peroxodiiron complex are sluggish oxidants with high epoxidation barriers. The epoxidation barriers for the mu-oxo-mu-1,1-peroxodiiron complex are significantly lower than the ones for the mu-oxo-mu-1,2-peroxodiiron complex but still are too high to be considered for catalytic properties. Thus, theory has ruled out two possible peroxodiiron catalysts as oxidants in RNR enzymes and biomimetics and the quest to find the actual oxidant in the enzyme mechanism continues.     

A Facile Synthesis of a Wide Variety of Cationic Ruthenium Hydrido‐Arene Complexes of binap (=1,1′‐Binaphthalene‐2,2′‐diylbis(diphenylphosphane)) and MeO?biphep (=6,6′‐Dimethoxybiphenyl‐2,2′‐diylbis(diphenylphosphane))

A straightforward high‐yield synthetic route to the cationic hydrido‐arene complexes [RuH(η⁶‐arene)(binap or MeO biphep)](CF₃SO₃), with a variety of arenes containing both donor and acceptor substituents, is described. ¹³C‐NMR Data for these complexes are reported. Several of these Ru‐complexes have been used as transfer‐hydrogenation catalysts in the reduction of acetophenone.     

Lamellare Schichtstrukturen von M[N(SO2C6H4‐4‐COOCH3)2] · n H2O (M = Na,n = 1; M = K,n = 0): Gibt es schwache Wasserstoffbrücken CH2–H…O=C zwischen den Schichten?

Structures of Ionic Di(arenesulfonyl)amides. 5. Lamellar Layer Structures of M[N(SO₂C₆H₄‐4‐COOCH₃)₂] · n H₂O (M = Na, n = 1; M = K, n = 0): Are there Weak Hydrogen Bonds CH₂–H…O=C between the Layers? The new lamellar compounds NaN(SO₂C₆H₄‐4‐COOMe)₂ · H₂O ( 1 a ) and KN(SO₂C₆H₄‐4‐COOMe)₂ ( 2 a ), obtained by neutralizing the corresponding strong NH acid with aqueous NaOH or KOH, were characterized by low‐temperature X‐ray diffraction ( 1 a : orthorhombic, space group Pbca, Z = 8, Z′ = 1; 2 a : orthorhombic, P2₁2₁2₁, Z = 8, Z′ = 2). Both crystals are further examples of layered inorgano‐organic solids where the inorganic component is comprised of metal cations, coordinating N(SO₂)₂ groups and water molecules (in 1 a ) and the outer regions are formed by the 4‐substituted phenyl rings of the folded anions, which approximate to mirror symmetry. In the two‐dimensional networks, the cations adopt respectively a distorted octahedral [Na(O–S)₄(OH₂)₂], an irregular [K(1)O₆N₂], or an irregular [K(2)O₉] coordination. In contrast to the previously reported carboxylic congeners, where an extensive series of C–O–H…O=C hydrogen bonds is observed between layers, the esterified materials do not display any O–CH₂–H…O=C interlayer bonding, although such interactions and short C_ar–H…O=C/O=S contacts exist within the lamellae.     

What is a ‘gel’?

Some of the existing definitions of the term ‘gel’ are discussed and shortcomings are identified. A purely phenomenological definition is proposed: a gel is a soft, solid or solid-like material consisting of two or more components one of which is a liquid, present in substantial quantity. ‘Solid-like gels’ are further defined in terms of the dynamic mechanical properties.     

Acid?Base Properties of Adenosine 5′‐Monophosphate,Guanosine 5′‐Monophosphate,and Inosine 5′‐Monophosphate in Aqueous Solutions of Methanol

The protonation constants of adenosine 5′‐monophosphate, guanosine 5′‐monophosphate, and inosine 5′‐monophosphate were determined in binary mixtures of H₂O containing 0, 10, 15, 20, 25, 30, 35, 40, 45, and 50% MeOH, using a combination of potentiometric and spectrophotometric methods at a constant temperature (25°) and constant ionic strength (0.1 mol?dm^?3 NaClO₄). The protonation constants were analyzed using the normalized polarity parameter (E ), and Kamlet, Abboud, and Taft (KAT) parameters. A linear correlation of log K vs. the normalized polarity parameter was obtained. Dual‐parameter correlation of log K vs. π* (dipolarity/polarizability) and α (H‐bond‐donor acidity), as well as π* and β (H‐bond‐acceptor basicity) also gives good results in various aqueous organic solvent mixtures. Finally, the results are discussed in terms of the effect of solvent on the protonation equilibria.     

Removal and Recovery of UO2(??) from Water Samples Using 2,2′‐Diamino‐4,4′‐bithiazole as a New Reagent for Solid Phase Extraction

A novel sensitive and simple method for rapid and selective extraction, preconcentration and determination of uranyl as its 2,2′‐diamino‐4,4′‐bithiazole (DABTZ) complex by using octadecylsilica columns and spectrophotometry is presented. Extraction efficiency and the influence of flow rates of sample solution and eluent, pH, amount of DABTZ, type and least amount of eluent for elution of uranyl complex from columns, break‐through volume and limit of detection were evaluated. Also the effects of various cationic and anionic interferences on percent recovery of uranyl were studied. Average extraction efficiency of ca. 90% was obtained by elution of the column with minimal amount of solvent in the presence of interferences. The average preconcentration factor, 136 and a detection limit 0.32 ng·mL^?1 were obtained. The method was applied to the recovery and determination of uranyl in different water samples.     

Do Carbenes Have a “Hidden” Carbon(0) Character? Revisiting the Electronic Structure of 2,2′‐Bipyridyl Carbene

Density functional calculations predict that 2,2′‐bipyridyl carbenes have some degree of “hidden” carbon(0) character. This is supported by very high second proton affinity values and bond dissociation energies (BDEs) for the dissociation of one AuCl and one Ni(CO)₂ molecule from [(AuCl)₂(2,2′‐bipyridyl carbene)] and [{Ni(CO)₂}₂(2,2′‐bipyridyl carbene)]. An Arduengo type carbene also showed significant BDE values for gem‐dimetallation, thus indicating the possible existence of carbon(0) character. All of the dimetallated derivatives showed metallophilic interactions.     

In Search of Organic Zeolites – Does Modern Information Retrieval Inevitably Become a ‘Sieving‐the‐Desert' Exercise?

Information retrieval for planning and executing research projects and for publishing results is considered a routine task that is usually neither mentioned explicitly in a scientific publication nor described in any detail. In the information searches for the preceding publication (‘Building an Organic Zeolite from a Macrocyclic TADDOL Derivative or How to Teach an Old Dog New Tricks'), we were confronted with so many problems during retrieval of the desired information about related work that we decided to deviate from this tradition. We had to use the Cambridge Structural Database, the Chemical Abstracts structure and literature databases, and the Beilstein database to the full extent of their contents, indexing, and search facilities to retrieve the necessary information about ‘organic zeolites'. In the process, we found important limitations and deficiencies in any one of these databases, and we had to conceive search procedures that we considered rather unusual even after more than 20 years of experience in searching chemistry databases. The results and, particularly, the problems encountered underline the necessity for enhanced integration of individual compound and property databases and improved standardization as a prerequisite for this.     

Conformationally Biased Mimics of Mannopyranosylamines: Inhibitors of β‐Mannosidases?

The enol ether 7 was prepared by cleavage of the N−O bond of the known isoxazolidine 3 , followed by N‐alkylation to 4 , silylation and oxidation to the N‐oxide 6 , and Cope elimination. Cu‐Catalysed cyclopropanation of 7 led to the diastereoisomeric cyclopropanes 8 and 9 , which were subjected to a Curtius degradation. The resulting carbamates 12 and 16 were deprotected to the ammonium salts 14 and 18 , respectively. Both salts adopt a B_1,4 conformation, similarly as the ester 8 , while the isomeric ester 9 exists in a ca. 6 : 4 equilibrium of the ⁴C₁ and B_1,4 conformers. The β‐mannoside mimic 14 does not inhibit snail β‐mannosidase at 10 mM , but the α‐mannoside mimic 18 inhibits Jack bean α‐mannosidase (IC₅₀=80 μM ). These results are in keeping with the postulate that glycoside cleavage of β‐D ‐glycopyranosides requires a conformational change in agreement with the principle of stereoelectronic control.     

Enantioselective Palladium‐Catalyzed Insertion of α‐Aryl‐α‐diazoacetates into the O?H Bonds of Phenols

A palladium‐catalyzed asymmetric O H insertion reaction was developed. Palladium complexes with chiral spiro bisoxazoline ligands promoted the insertion of α‐aryl‐α‐diazoacetates into the O H bond of phenols with high yield and excellent enantioselectivity under mild reaction conditions. This palladium‐catalyzed asymmetric O H insertion reaction provided an efficient and highly enantioselective method for the preparation of synthetically useful optically active α‐aryl‐α‐aryloxyacetates.     

Use of LC–HRMS in full scan‐XIC mode for multi‐analyte urine drug testing – a step towards a ‘black‐box’ solution?

The influx of new psychoactive substances (NPS) has created a need for improved methods for drug testing in toxicology laboratories. The aim of this work was to design, validate and apply a multi‐analyte liquid chromatography–high‐resolution mass spectrometry (LC–HRMS) method for screening of 148 target analytes belonging to the NPS class, plant alkaloids and new psychoactive therapeutic drugs. The analytical method used a fivefold dilution of urine with nine deuterated internal standards and injection of 2 μl. The LC system involved a 2.0 μm 100 × 2.0 mm YMC‐UltraHT Hydrosphere‐C₁₈ column and gradient elution with a flow rate of 0.5 ml/min and a total analysis time of 6.0 min. Solvent A consisted of 10 mmol/l ammonium formate and 0.005% formic acid, pH 4.8, and Solvent B was methanol with 10 mmol/l ammonium formate and 0.005% formic acid. The HRMS (Q Exactive, Thermo Scientific) used a heated electrospray interface and was operated in positive mode with 70 000 resolution. The scan range was 100–650 Da, and data for extracted ion chromatograms used ± 10 ppm tolerance. Product ion monitoring was applied for confirmation analysis and for some selected analytes also for screening. Method validation demonstrated limited influence from urine matrix, linear response within the measuring range (typically 0.1–1.0 μg/ml) and acceptable imprecision in quantification (CV <15%). A few analytes were found to be unstable in urine upon storage. The method was successfully applied for routine drug testing of 17 936 unknown samples, of which 2715 (15%) contained 52 of the 148 analytes. It is concluded that the method design based on simple dilution of urine and using LC–HRMS in extracted ion chromatogram mode may offer an analytical system for urine drug testing that fulfils the requirement of a ‘black box’ solution and can replace immunochemical screening applied on autoanalyzers. Copyright © 2017 John Wiley & Sons, Ltd.