Specialist or generalist?

Analytical and Bioanalytical Chemistry -     

Organic synthesis--art or science?

The LHASA rules for finding strategic bonds in polycyclic target structures are analyzed with respect to the following question: Do the strategic bonds tend to give the greatest simplification upon disconnection, as measured by recently introduced indices of molecular complexity? The answer is yes, at least for the more general rules. This result implies that the bonds most useful for retrosynthetic disconnection can now be identified by a simple calculation rather than by application of a body of rules. It is concluded that organic synthesis, as far as described by these rules, has a mathematical basis and consequently can be considered a science as well as an art.     

Magnesium Cyanide or Isocyanide?

Preference for the binding mode of the CN^? ligand to Mg (Mg?CN vs. Mg?NC) is investigated. A monomeric Mg complex with a terminal CN ligand was prepared using the dipyrromethene ligand ^MesDPM which successfully blocks dimerization. While reaction of (^MesDPM)MgN(SiMe₃)₂ with Me₃SiCN gave the coordination complex (^MesDPM)MgN(SiMe₃)₂?NCSiMe₃, reaction with (^MesDPM)Mg(nBu) led to (^MesDPM)MgNC?(THF)₂. A Mg?NC/Mg?CN ratio of ≈95:5 was established by crystal‐structure determination and DFT calculations. IR studies show absorbances for CN stretching at 2085 cm^?1 (Mg?NC) and 2162 cm^?1 (Mg?CN) as confirmed by ¹³C labeling. In solution and in the solid state, the CN ligand rotates within the pocket. The calculated isomerization barrier is only 12.0 kcal mol^?1 and the ¹³C NMR signal for CN decoalesces at ?85 °C (Mg?NC: 175.9 ppm, Mg?CN: 144.3 ppm). Experiment and theory both indicate that Mg complexes with the CN^? ligand should not be named cyanides but are more properly defined as isocyanides.     

Selectable one-dimensional or two-dimensional gas chromatography–mass spectrometry with simultaneous olfactometry or element-specific detection

A novel selectable one-dimensional (¹D) or two-dimensional (²D) gas chromatography–mass spectrometry (selectable ¹D/²D GC–MS) system with selective detection was developed by using capillary flow technology and low thermal mass GC (LTM-GC). The main advantages of this system are the simple and fast selection of ¹D GC–MS or ²D GC–MS operation without any instrumental set-up change (e.g.²D GC–MS can be run just after ¹D GC–MS run), and simultaneous mass spectrometric and olfactometry or element-specific detection for both ¹D and ²D separation to assure selection of a heart-cut region and correct identification of compounds of interest. The feasibility and benefit of the proposed system with selective detection, e.g. olfactometry, nitrogen phosphorus detection (NPD), and pulsed flame photometric detection (PFPD), was demonstrated with an identification of trace amounts of aroma components in beverages (beer and coffee). Using stir bar sorptive extraction (SBSE) and selectable ¹D/²D GC–Olfactometry/MS on a beer sample, β-damascenone could be determined at 1.9 ng mL⁻¹ (RSD 3.1%, n = 6) as a potent aroma compound. In a coffee sample, two odor active compounds were clearly resolved from a 4.2 s heart-cut and were assigned probable identifications as 4,5-dimethyl thiazole and dimethyl trisulfide based on a NIST library search, dual linear retention indices (dual LRI) and elemental information obtained by SBSE in combination with selectable ¹D/²D GC–NPD/PFPD/MS.     

To fold or to assemble?

We introduce a new class of foldable oligomers consisting of alternating rigid and flexible regions. The rigid segments overlap to give pi-stacked folded conformers whose formation is driven mostly by pi-pi molecular orbital overlaps. As the oligomer concentration increases, the folded molecular structures further self-assemble into larger nanostructures. The dynamic processes of folding and self-organization are monitored with absorption, fluorescence, and NMR spectroscopies. Our results show that folding dominates at low concentrations (< approximately 1 mM) and precedes self-assembly, which occurs over the initial concentration range of approximately 1-100 mM.     

Excess molar volumes of binary mixtures of 2,2,2-trifluoroethanol with water,or acetone,or 1,4-difluorobenzene,or 4-fluorotoluene,or α,α,α, trifluorotoluene or 1-alcohols at a temperature of 298.15 K and pressure of 101 kPa

Excess molar volumes V_m^E of binary mixtures of 2,2,2-trifluoroethanol with water, or acetone, or methanol, or ethanol, or 1-alcholos, or 1,4-difluorobenzene, or 4-fluorotoluene or α,α,α-trifluorotoluene were measured in a vibrating tube densimeter at temperature 298.15 K and pressure of 101 kPa. The V_m^E extrema are: 1.540 cm³ · mol⁻¹ for (2,2,2-trifluoroethanol + 1-heptanol); 1.452 cm³ · mol⁻¹ for (2,2,2-trifluoroethanol + 1-hexanol); 1.238 cm³ · mol⁻¹ for (2,2,2-trifluoroethanol + 1-butanol); 0.821 cm³ · mol⁻¹ for (2,2,2-trifluoroethanol + 4-fluorotoluene); 0.817 cm³ · mol⁻¹ for (2,2,2-trifluoroethanol + ethanol); 0.647 cm³ · mol⁻¹ for (2,2,2-trifluoroethanol + methanol); 0.618 cm³ · mol⁻¹ for (2,2,2-trifluoroethanol + acetone); 0.605 cm³ · mol⁻¹ for (2,2,2-trifluoroethanol + α,α,α-trifluorotoluene); 0.485 cm³ · mol⁻¹ for (2,2,2-trifluoroethanol + 1,4-difluorobenzene); and −0.656 cm³ · mol⁻¹ for (2,2,2-trifluoroethanol + water). The limiting excess partial molar volumes are estimated.     

Biotin synthase: enzyme or reactant?

Biotin synthase catalyzes formation of a thiophane ring through a radical mechanism that is difficult to reconstitute in vitro. Choi-Rhee and Cronan measure a turnover of 20-60 equivalents of biotin in vivo, but also find that turnover renders the protein susceptible to proteolytic destruction.     

Nanocomposites: Industrial opportunity or challenge?

Polymer nanocomposites based on organically modified layered silicates are an area of substantial scientific interest and of emerging industrial practice. Despite the proven benefits of nanocomposites such as mechanical properties, barrier properties and contribution to fire retardancy, polymer nanocomposites are used today only in niche applications. The reasons for the limited growth of nanocomposites are explained through the availability of alternative solutions, processing and dispersion challenges and inferior oxidative and photooxidative stability. Recent developments show the improved dispersion of unmodified nanoclays in polyolefins with the help of selected copolymer structures. The (photo)oxidative instability of nanocomposites is compensated with adjusted stabilizer systems.     

Perspective: Quantum or classical coherence?

Some coherence effects in chemical dynamics are described correctly by classical mechanics, while others only appear in a quantum treatment--and when these are observed experimentally it is not always immediately obvious whether their origin is classical or quantum. Semiclassical theory provides a systematic way of adding quantum coherence to classical molecular dynamics and thus provides a useful way to distinguish between classical and quantum coherence. Several examples are discussed which illustrate both cases. Particularly interesting is the situation with electronically non-adiabatic processes, where sometimes whether the coherence effects are classical or quantum depends on what specific aspects of the process are observed.     

AlN nanotube: round or faceted?

Theoretical studies on one-dimensional AlN nanostructures have been performed. A faceted instead of cylindric model is proposed to reasonably understand the synthesized hexagonal AlN nanotubes. The close correlation is established that the nanotube structure should possess similar symmetry to that of the corresponding bulk crystal. This is also suitable for the few other faceted nanotubes and could be used to predict the morphology for the increasing nanotubes from nonlayered materials.