脉冲电场O/W乳状液破乳的分子动力学模拟

采用分子动力学方法研究了水包油(O/W)型乳状液体系中重油油滴在脉冲电场中的聚集行为. 通过改变电场占空比的模拟参数, 探讨了一定电场强度下的油滴聚集行为, 以及电场破乳时电场强度参数与占空比参数之间的联系. 同时利用静电势分布、 相互作用势能以及结合构象统计等分析方法, 从微观角度说明在电场作用下油滴的电荷分布与聚集机制. 模拟结果表明, 在近0.40~0.75 V/nm范围内电场强度下, 距离一定的重油滴聚集, 低电场强度可通过增加占空比促使油滴聚集, 且占空比随电场强度的增大而减小; 油滴在电场中发生形变, 油滴电荷出现两极化分布, 带负电沥青质分子引导油滴朝电场反方向移动; 无电场下聚集过程中沥青质处于两油滴界面, 范德华作用力为油滴聚集的主要作用力, 同时油滴界面沥青质分子与周围分子形成π-π结合构象, 增强了油滴间的相互作用力.     

表面电荷及外电场对液固界面热阻的影响

采用非平衡分子动力学方法模拟了外电场及固体表面电荷对水与固体间界面热阻的影响. 结果表明,外加电场平行于界面时, 其对界面热阻几乎没有影响, 而垂直于界面时, 界面热阻将随着电场强度的增大而减小. 壁面带正电荷或负电荷都将使得界面热阻减小. 界面热阻与表面电荷密度及电场强度均满足二次函数关系. 模拟结果表明施加外电场和表面电荷是控制液固界面热阻的有效方法.     

不含蛋白质的功能泡囊膜及对酶的模拟

本篇综述了模拟生物膜的不含蛋白质的功能泡囊膜的建立过程,并介绍了这类功能泡囊膜所进行的模拟酶的泡囊催化反应。以磷脂或亲水亲油的表面活性剂分子所提供的双分子层泡囊结构为基质,分别在其不同的区域引入活性基团或分子,赋予了泡囊新的功能,由此可实现对一些反应的进程及产物构象的控制。利用这类功能泡囊膜,已成功地模拟了水解酶、还原酶、转氨酶、生物体内的碳单元传递反应等,并为模拟光合作用提供了一个很好的模式。     

均匀电场对冰晶结构及生长的影响（英文）

采用分子动力学模拟方法研究了强度为4.0-40.0 V·nm-1的均匀电场对过冷水冰晶结构和冰晶生长速率的影响.文中通过CHILL算法来识别不同的冰相结构,通过拟合Avrami公式来得到冰晶生长所需的特征时间.结果表明,在所施加的电场强度范围内生成的冰相以立方冰为主.随着电场强度的增加,形成的立方冰的变形程度逐渐增大,冰晶的密度从0.98 g·cm-3增加到1.08 g·cm-3,同时冰晶生长的特征时间从5.153 ns减小到0.254 ns,冰晶生长的速率逐渐增长.对水分子的动力学分析表明,冰晶生长速率增加的部分原因是电场能够促进水分子运动到形成冰晶所需要的取向.此外,对冰相分子形成过程的分析表明缺陷冰分子在冰晶的生长过程中扮演着中间态的角色.随电场强度的增加,由缺陷冰转变为立方冰的比例增长的速率逐渐提高.     

胆固醇对卵磷脂囊泡稳定性的影响

采用透射电子显微镜研究了Gemini表面活性剂诱导卵磷脂囊泡结构改变的机理, 用Langmuir膜天平研究卵磷脂和胆固醇的不溶单分子混合膜在气-液界面的行为和混合膜分子间的相互作用, 并结合动态光散射技术和停留法探讨胆固醇对Gemini表面活性剂诱导卵磷脂囊泡结构改变的影响. 从电镜结果可以推测带正电荷的Gemini表面活性剂分子会嵌入到带负电荷的卵磷脂囊泡双分子层的外层, 囊泡的双分子层之间的相互吸引力使双分子层的厚度减少, 由于嵌入的表面活性剂分子在囊泡的双分子层中分布是不均匀的, 这种分布的不均匀性必然会导致双分子层厚度的不均匀, 从而使囊泡破裂. 混合膜的过剩面积和动力学结果表明, 胆固醇和卵磷脂是相互吸引的, 即胆固醇的加入使卵磷脂囊泡更不容易被表面活性剂破坏.     

杂臂星型嵌段共聚物在溶液中自组装形成囊泡结构的计算机模拟

利用耗散粒子动力学模拟方法, 研究了杂臂星型嵌段共聚物A_m(B_n)₂在溶液中自组装形成囊泡的行为. 主要分析了自组装过程、亲水分枝和疏水分枝的长度及分子构型对组装结构的影响. 结果表明, 杂臂星型聚合物在溶液中会自组装形成碟状胶束, 之后弯曲闭合形成囊泡. 当亲水部分的分枝较短时, 易于形成囊泡结构; 在可形成囊泡结构的条件下, 双分子层囊泡膜的厚度随分枝长度的增加而增加. 与构成相近的线型嵌段共聚物相比, 杂臂星型嵌段共聚物更易形成囊泡结构, 且形成的囊泡结构较薄.     

季铵盐型Gemini表面活性剂诱导囊泡结构改变机理研究

用动态光散射技术以及荧光探针方法, 研究了不同连接基长度的季铵盐型Gemini表面活性剂对卵磷脂囊泡结构改变的影响, 并借助理论模型和临界堆积参数理论探索了Gemini表面活性剂诱导囊泡结构改变的机理. 实验结果表明, 表面活性剂诱导囊泡结构改变的主要原因是表面活性剂嵌入到囊泡的双分子层中, 从而改变了囊泡的表面电荷强度以及嵌入后的表面活性剂在囊泡双分子层中分布的不均匀性. 此外, 表面活性剂分子的结构也会对其产生影响, 不同连接基长度的季铵盐型Gemini表面活性剂对囊泡结构改变的影响不完全相同, 但会呈现出一定的规律性.     

非离子表面活性剂囊泡对头孢菌素药物的缓释作用

用超声法制备了Span系列非离子表面活性剂囊泡,研究了它们对几种水溶性头孢菌素药物的包封作用及影响包封率的因素,通过透射电镜对囊泡的形态和大小进行了鉴定.实验表明,制得的囊泡多为球形单室囊泡,且包封后的药物在模拟肠液和模拟胃液中均有缓释作用.     

两亲分子溶液聚集体结构的冷冻刻饰电子显微镜研究

利用冷冻刻饰电子显微镜(FF-TEM)技术研究了两亲分子溶液不同有序聚集体的结构, 特别对一些两亲分子溶液体系形成的泡囊结构进行了详细的研究, 探讨了聚集体结构的演变规律. 对无剪切力下化学反应诱导L3-相(海绵相)到层状Lα-相, 手振荡层状Lα-相到多双层泡囊相及高剪切力作用下多双层泡囊相到单双层泡囊相的结构演变进行了冷冻刻饰电子显微镜追踪研究. 首次报道了-诱导的单链长表面活性剂溶液中泡囊相的形成.     

两亲性线性-超支化多臂共聚物在水溶液中自组装为阳离子囊泡的研究

利用两亲性线性-超支化多臂共聚物聚乙二醇-聚乙烯亚胺-聚谷氨酸苄酯(PEG-PEI-PBLG)在水溶液中自组装为阳离子囊泡. 利用透射电镜、动态光散射、静态光散射和zeta电位仪对囊泡结构进行了表征. PEG-PEI-PBLG囊泡具有双分子层结构, 壁厚5~10 nm, 直径在100 nm左右. 由于PEI在水溶液中的质子化作用, 囊泡表面携带有正电荷, 其表面电势为＋25。2 mV, 因此PEG-PEI-PBLG阳离子囊泡具有担载负电性蛋白的能力.     

Electrophoretic transport and dynamic deformation of bio‐vesicles

Study of the deformation dynamics of cells and other sub‐micron vesicles, such as virus and neurotransmitter vesicles are necessary to understand their functional properties. This mechanical characterization can be done by submerging the vesicle in a fluid medium and deforming it with a controlled electric field, which is known as electrodeformation. Electrodeformation of biological and artificial lipid vesicles is directly influenced by the vesicle and surrounding media properties and geometric factors. The problem is compounded when the vesicle is naturally charged, which creates electrophoretic forcing on the vesicle membrane. We studied the electrodeformation and transport of charged vesicles immersed in a fluid media under the influence of a DC electric field. The electric field and fluid‐solid interactions are modeled using a hybrid immersed interface‐immersed boundary technique. Model results are verified with experimental observations for electric field driven translocation of a virus through a nanopore sensor. Our modeling results show interesting changes in deformation behavior with changing electrical properties of the vesicle and the surrounding media. Vesicle movement due to electrophoresis can also be characterized by the change in local conductivity, which can serve as a potential sensing mechanism for electrodeformation experiments in solid‐state nanopore setups.     

Electromechanical characterization of biomimetic membranes using electrodeformation of vesicles

We describe a facile method to simultaneously measure the bending rigidity and capacitance of biomimetic lipid bilayers. Our approach utilizes the ellipsoidal deformation of quasi-spherical giant unilamellar vesicles induced by a uniform AC electric field. Vesicle shape depends on the electric field frequency and amplitude. Membrane bending rigidity can be obtained from the variation of the vesicle elongation on either field amplitude at fixed frequency or frequency at fixed field amplitude. Membrane capacitance is determined from the frequency at which the vesicle shape changes from prolate to oblate ellipsoid as the frequency is increased at a given field amplitude.     

Entropic stabilization and equilibrium size of lipid vesicles

We have studied the phase behavior of zwitterionic phospholipid dioleoylphosphatidylcholine (DOPC) vesicles (membranes) and interpreted our results using scaling arguments in combination with molecular realistic self-consistent field (SCF) calculations. DOPC membranes acquire a partial negative charge per lipid molecule at intermediate NaBr concentrations. As a result of this, dilute DOPC solutions form stable unilamellar vesicles. Both at low and high salt concentrations phase separation into a lamellar and a vesicular phase is observed. The vesicle radius decreases as a power law with decreasing lipid concentration. This power-law concentration dependence indicates that the vesicle phase is entropically stabilized; the size of the DOPC vesicles result from a competition between the bending energy and translation and undulation entropy. This scaling behavior breaks down for very small vesicles. This appears to be consistent with SCF predictions that point to the fact that in this regime the mean bending modulus kc increases with curvature. The SCF theory predicts that, at low ionic strength, the membrane stability improves when there is more charge on the lipids. Upon a decrease of the ionic strength, lipids with a full negative charge form vesicles that grow exponentially in size because the mean bending modulus increases with decreasing ionic strength. At the same time the Gaussian bending modulus becomes increasingly negative such that the overall bending energy tends to zero. This indicates that small micelles become the dominant species. The SCF theory thus predicts a catastrophic break down of giant vesicles in favor of small micelles at sufficiently low ionic strength and high charge density on the lipids.     

Simulations of temperature dependence of the formation of a supported lipid bilayer via vesicle adsorption

Recent experimental investigations of the kinetics of vesicle adsorption in solution on SiO2 demonstrate a thermally activated transition from adsorbed intact vesicles to a supported lipid bilayer. Our Monte Carlo simulations clarify the mechanism of this process. The model employed is an extension of the model used earlier to describe vesicle adsorption at room temperature. Specifically, it includes limitations of the adsorption rate by vesicle diffusion in the solution, and adsorption- and lipid-membrane-induced rupture of arriving and already adsorbed vesicles. Vesicles and lipid molecules, formed after rupture of vesicles, are considered immobile. With these ingredients, the model is able to quantitatively reproduce the temperature-dependent adsorption kinetics, including a higher critical surface concentration of intact vesicles for lower temperatures, and the apparent activation energy for the vesicle-to-bilayer transition E(a) approximately 5 kcal/mol.     

Coarse-grained transmembrane proteins: hydrophobic matching, aggregation, and their effect on fusion

Molecular transport between organelles is predominantly governed by vesicle fission and fusion. Unlike experimental vesicles, the fused vesicles in molecular dynamics simulations do not become spherical readily, because the lipid and water distribution is inappropriate for the fused state and spontaneous amendment is slow. Here, we study the hypothesis that enhanced transport across the membrane of water, lipids, or both is required to produce spherical vesicles. This is done by adding several kinds of model proteins to fusing vesicles. The results show that equilibration of both water and lipid content is a requirement for spherical vesicles. In addition, the effect of these transmembrane proteins is studied in bilayers and vesicles, including investigations into hydrophobic matching and aggregation. Our simulations show that the level of aggregation does not only depend on hydrophobic mismatch, but also on protein shape. Additionally, one of the proteins promotes fusion by inducing pore formation. Incorporation of these proteins allows even flat membranes to fuse spontaneously. Moreover, we encountered a novel spontaneous vesicle enlargement mechanism we call the engulfing lobe, which may explain how lipids added to a vesicle solution are quickly incorporated into the inner monolayer.     

Membrane electroporation and electromechanical deformation of vesicles and cells

Analysis of the reduced turbidity (delta T-/T0) and absorbance (delta A-/A0) relaxations of unilamellar lipid vesicles, doped with the diphenylhexatrienyl-phosphatidylcholine (beta-DPH pPC) lipids in high-voltage rectangular electrical field pulses, demonstrates that the major part of the turbidity and absorbance dichroism is caused by vesicle elongation under electric Maxwell stress. The kinetics of this electrochemomechanical shape deformation (time constants 0.1 < or = tau/microsecond < or = 3) is determined both by the entrance of water and ions into the bulk membrane phase to form local electropores, and by the faster processes of membrane stretching and smoothing of thermal undulations. Moreover, the absorbance dichroism indicates local displacements of the chromophore relative to the membrane normal in the field. The slightly slower relaxations of the chemical turbidity (delta T+/T0) and absorbance (delta A+/A0) modes are both associated with the entrance of solvent into the interface membrane/medium, caused by the alignment of the bipolar lipid head groups in one of the leaflets at the pole caps of the vesicle bilayer. In addition, (delta T+/T0) indicates changes in vesicle shape and volume. The results for lipid vesicles provide guidelines for the analysis of electroporative deformations of biological cells.     

Micropatterning of DNA-tagged vesicles

We present a novel concept for the creation of lipid vesicle microarrays based on a patterning approach termed Molecular Assembly Patterning by Lift-off (MAPL). A homogeneous MAPL-based single-stranded DNA microarray was converted into a vesicle array by the use of vesicles tagged with complementary DNAs, permitting sequence-specific coupling of vesicles to predefined surface regions through complementary DNA hybridization. In the multistep process utilized to fulfill this achievement, active spots consisting of PLL-g-PEGbiotin with a resistant PLL-g-PEG background, as provided by the MAPL process, was converted into a DNA array by addition of complexes of biotin-terminated DNA and NeutrAvidin. This was then followed by addition of POPC vesicles tagged with complementary cholesterol-terminated DNA, thus providing specific coupling of vesicles to the surface through complementary DNA hybridization. Quartz crystal microbalance with dissipation (QCM-D) and optical waveguide lightmode spectroscopy monitoring were used to optimize the multistep surface modification process. It was found that the amount of adsorbed biotinDNA-NeutrAvidin complexes decreases with increasing molar ratio of biotinDNA to NeutrAvidin and decreasing ionic strength of the buffer solution. Modeling of the QCM-D data showed that the shape of the immobilized vesicles depends on the amount of available anchoring groups between the vesicles and the surface. Fluorescent microscopy images confirmed the possibility to create well-defined patterns of DNA-tagged, fluorescently labeled vesicles in the micrometer range.     

Electric field-controlled water permeation coupled to ion transport through a nanopore

We report molecular dynamics simulations of a generic hydrophobic nanopore connecting two reservoirs which are initially at different Na(+) concentrations, as in a biological cell. The nanopore is impermeable to water under equilibrium conditions, but the strong electric field caused by the ionic concentration gradient drives water molecules in. The density and structure of water in the pore are highly field dependent. In a typical simulation run, we observe a succession of cation passages through the pore, characterized by approximately bulk mobility. These ion passages reduce the electric field, until the pore empties of water and closes to further ion transport, thus providing a possible mechanism for biological ion channel gating.     

The adhesion kinetics of sticky vesicles in tension: the distinction between spreading and receptor binding

We investigate the kinetics of spreading and adhesion between polymer vesicles decorated with avidin and biotin, held in micropipettes to maintain fixed tension and suppress membrane bending fluctuations. In this study, the density of avidin (actually Neutravidin) and biotin was varied, but was always sufficiently high so that lateral diffusion in the membrane was unimportant to the adhesive mechanism or rate. For a stunning result, we report a concentration-dependent distinction between adhesion and spreading: At low surface densities of avidin and biotin, irreversible vesicle adhesion is strong enough to break the membrane when vesicle separation is attempted, yet there is no spreading or "wetting". By this we mean that there is no development of an adhesion plaque beyond the initial radius of contact and there is no development of a meaningful contact angle. Conversely, at 30% functionalization and greater, membrane adhesion is manifest through a spreading process in which the vesicle held at lower tension partially engulfs the second vesicle, and the adhesion plaque grows, as does the contact angle. Generally, when spreading occurs, it starts abruptly, following a latent contact period whose duration decreases with increasing membrane functionality. A nucleation-type rate law describes the latency period, determined by competition between bending and sticking energy. The significance of this result is that, not only are membrane mechanics important to the development of adhesion in membranes of nanometer-scale thickness, mechanics can dominate and even mask adhesive features such as contact angle. This renders contact angle analyses inappropriate for some systems. The results also suggest that there exist large regions of parameter space where adhesive polymeric vesicles will behave qualitatively differently from their phospholipid counterparts. This motivates different strategies to design polymeric vesicles for applications such as targeted drug delivery and biomimetic scavengers.     

pH-driven assembly of various supported lipid platforms: a comparative study on silicon oxide and titanium oxide

Supported lipid platforms are versatile cell membrane mimics whose structural properties can be tailored to suit the application of interest. By identifying parameters that control the self-assembly of these platforms, there is potential to develop advanced biomimetic systems that overcome the surface specificity of lipid vesicle interactions under physiological conditions. In this work, we investigated the adsorption kinetics of vesicles onto silicon and titanium oxides as a function of pH. On each substrate, a planar bilayer and a layer of intact vesicles could be self-assembled in a pH-dependent manner, demonstrating the role of surface charge density in the self-assembly process. Under acidic pH conditions where both zwitterionic lipid vesicles and the oxide films possess near-neutral electric surface charges, vesicle rupture could occur, demonstrating that the process is driven by nonelectrostatic interactions. However, we observed that the initial rupturing process is insufficient for propagating bilayer formation. The role of electrostatic interactions for propagating bilayer formation differs for the two substrates; electrostatic attraction between vesicles and the substrate is necessary for complete bilayer formation on titanium oxide but is not necessary on silicon oxide. Conversely, in the high pH regime, repulsive electrostatic interactions can result in the irreversible adsorption of intact vesicles on silicon oxide and even a reversibly adsorbed vesicle layer on titanium oxide. Together, the results show that pH is an effective tool to modulate vesicle-substrate interactions in order to create various self-assembled lipid platforms on hydrophilic substrates.