An overlapping cluster algorithm to provide non-exhaustive clustering

The partitioning clustering is a technique to classify n objects into k disjoint clusters, and has been developed for years and widely used in many applications. In this paper, a new overlapping cluster algorithm is defined. It differs from traditional clustering algorithms in three respects. First, the new clustering is overlapping, because clusters are allowed to overlap with one another. Second, the clustering is non-exhaustive, because an object is permitted to belong to no cluster. Third, the goals considered in this research are the maximization of the average number of objects contained in a cluster and the maximization of the distances among cluster centers, while the goals in previous research are the maximization of the similarities of objects in the same clusters and the minimization of the similarities of objects in different clusters. Furthermore, the new clustering is also different from the traditional fuzzy clustering, because the object–cluster relationship in the new clustering is represented by a crisp value rather than that represented by using a fuzzy membership degree. Accordingly, a new overlapping partitioning cluster (OPC) algorithm is proposed to provide overlapping and non-exhaustive clustering of objects. Finally, several simulation and real world data sets are used to evaluate the effectiveness and the efficiency of the OPC algorithm, and the outcomes indicate that the algorithm can generate satisfactory clustering results.     

Cluster analysis based on fuzzy equivalence relation

In this paper, a cluster analysis method based on fuzzy equivalence relation is proposed. At first, the distance formula between two trapezoidal fuzzy numbers is used to aggregate subjects' linguistic assessments about attributes ratings to obtain the compatibility relation. Then a fuzzy equivalence relation based on the fuzzy compatibility relation can be constructed. Finally, using a cluster validity index to determine the best number of clusters and taking suitable λ-cut value, the clustering analysis can be effectively implemented. By utilizing this clustering analysis, the subjects' fuzzy assessments with various rating attitudes can be taken into account in the aggregation process to assure more convincing and accurate cluster analysis.     

Mixed fuzzy inter-cluster separation clustering algorithm

Based on inter-cluster separation clustering (ICSC) fuzzy inter-cluster separation clustering (FICSC) deals with all the distances between the cluster centers, maximizes these distances and obtains the better performances of clustering. However, FICSC is sensitive to noises the same as fuzzy c-means (FCM) clustering. Possibilistic type of FICSC is proposed to combine FICSC and possibilistic c-means (PCM) clustering. Mixed fuzzy inter-cluster separation clustering (MFICSC) is presented to extend possibilistic type of FICSC because possibilistic type of FICSC is sensitive to initial cluster centers and always generates coincident clusters. MFICSC can produce both fuzzy membership values and typicality values simultaneously. MFICSC shows good performances in dealing with noisy data and overcoming the problem of coincident clusters. The experimental results with data sets show that our proposed MFICSC holds better clustering accuracy, little clustering time and the exact cluster centers.     

A modified rough c-means clustering algorithm based on hybrid imbalanced measure of distance and density

Traditional c-means clustering partitions a group of objects into a number of non-overlapping sets. Rough sets provide more flexible and objective representation than classical sets with hard partition and fuzzy sets with subjective membership function for a given dataset. Rough c-means clustering and its extensions were introduced and successfully applied in many real life applications in recent years. Each cluster is represented by a reasonable pair of lower and upper approximations. However, the most available algorithms pay no attention to the influence of the imbalanced spatial distribution within a cluster. The limitation of the mean iterative calculation function, with the same weight for all the data objects in a lower or upper approximation, is analyzed. A hybrid imbalanced measure of distance and density for the rough c-means clustering is defined, and a modified rough c-means clustering algorithm is presented in this paper. To evaluate the proposed algorithm, it has been applied to several real world data sets from UCI. The validity of this algorithm is demonstrated by the results of comparative experiments.     

An Evolutionary Approach to Spatial Fuzzy c-Means Clustering

Fuzzy c-means clustering algorithm (FCM) can provide a non-parametric and unsupervised approach to the cluster analysis of data. Several efforts of fuzzy clustering have been undertaken by Bezdek and other researchers. Earlier studies in this field have reported problems due to the setting of optimum initial condition, cluster validity measure, and high computational load. More recently, the fuzzy clustering has benefited of a synergistic approach with Genetic Algorithms (GA) that play the role of an useful optimization technique that helps to better tolerate some classical drawbacks, such as sensitivity to initialization, noise and outliers, and susceptibility to local minima. We propose a genetic-level clustering methodology able to cluster objects represented by R ^p spaces. The unsupervised cluster algorithm, called SFCM (Spatial Fuzzy c-Means), is based on a fuzzy clustering c-means method that searches the best fuzzy partition of the universe assuming that the evaluation of each object with respect to some features is unknown, but knowing that it belongs to circular regions of R ² space. Next we present a Java implementation of the algorithm, which provides a complete and efficient visual interaction for the setting of the parameters involved into the system. To demonstrate the applications of SFCM, we discuss a case study where it is shown the generality of our model by treating a simple 3-way data fuzzy clustering as example of a multicriteria optimization problem.     

A fuzzy multi-objective particle swarm optimization for effective data clustering

Data clustering, also called unsupervised learning, is a fundamental issue in data mining that is used to understand and mine the structure of an untagged assemblage of data into separate groups based on their similarity. Recent studies have shown that clustering techniques that optimize a single objective may not provide satisfactory result because no single validity measure works well on different kinds of data sets. Moreover, the performance of clustering algorithms degrades with more and more overlaps among clusters in a data set. These facts have motivated us to develop a fuzzy multi-objective particle swarm optimization framework in an innovative fashion for data clustering, termed as FMOPSO, which is able to deliver more effective results than state-of-the-art clustering algorithms. The key challenge in designing FMOPSO framework for data clustering is how to resolve cluster assignments confusion with such points in the data set which have significant belongingness to more than one cluster. The proposed framework addresses this problem by identification of points having significant membership to multiple classes, excluding them, and re-classifying them into single class assignments. To ascertain the superiority of the proposed algorithm, statistical tests have been performed on a variety of numerical and categorical real life data sets. Our empirical study shows that the performance of the proposed framework (in both terms of efficiency and effectiveness) significantly outperforms the state-of-the-art data clustering algorithms.     

A Global Optimization RLT-based Approach for Solving the Fuzzy Clustering Problem

The field of cluster analysis is primarily concerned with the partitioning of data points into different clusters so as to optimize a certain criterion. Rapid advances in technology have made it possible to address clustering problems via optimization theory. In this paper, we present a global optimization algorithm to solve the fuzzy clustering problem, where each data point is to be assigned to (possibly) several clusters, with a membership grade assigned to each data point that reflects the likelihood of the data point belonging to that cluster. The fuzzy clustering problem is formulated as a nonlinear program, for which a tight linear programming relaxation is constructed via the Reformulation-Linearization Technique (RLT) in concert with additional valid inequalities. This construct is embedded within a specialized branch-and-bound (B&B) algorithm to solve the problem to global optimality. Computational experience is reported using several standard data sets from the literature as well as using synthetically generated larger problem instances. The results validate the robustness of the proposed algorithmic procedure and exhibit its dominance over the popular fuzzy c-means algorithmic technique and the commercial global optimizer BARON.     

Fuzzy clustering using multiple Gaussian kernels with optimized-parameters

In this paper, we propose a new kernel-based fuzzy clustering algorithm which tries to find the best clustering results using optimal parameters of each kernel in each cluster. It is known that data with nonlinear relationships can be separated using one of the kernel-based fuzzy clustering methods. Two common fuzzy clustering approaches are: clustering with a single kernel and clustering with multiple kernels. While clustering with a single kernel doesn’t work well with “multiple-density” clusters, multiple kernel-based fuzzy clustering tries to find an optimal linear weighted combination of kernels with initial fixed (not necessarily the best) parameters. Our algorithm is an extension of the single kernel-based fuzzy c-means and the multiple kernel-based fuzzy clustering algorithms. In this algorithm, there is no need to give “good” parameters of each kernel and no need to give an initial “good” number of kernels. Every cluster will be characterized by a Gaussian kernel with optimal parameters. In order to show its effective clustering performance, we have compared it to other similar clustering algorithms using different databases and different clustering validity measures.     

Hierarchical hesitant fuzzy K-means clustering algorithm简

Due to the limitation and hesitation in one＇s knowledge, the membership degree of an element to a given set usually has a few different values, in which the conventional fuzzy sets are invalid. Hesitant fuzzy sets are a powerful tool to treat this case. The present paper focuses on investigating the clustering technique for hesitant fuzzy sets based on the K-means clustering algorithm which takes the results of hierarchical clustering as the initial clusters. Finally, two examples demonstrate the validity of our algorithm.     

On the use of divergence distance in fuzzy clustering

Clustering algorithms divide up a dataset into a set of classes/clusters, where similar data objects are assigned to the same cluster. When the boundary between clusters is ill defined, which yields situations where the same data object belongs to more than one class, the notion of fuzzy clustering becomes relevant. In this course, each datum belongs to a given class with some membership grade, between 0 and 1. The most prominent fuzzy clustering algorithm is the fuzzy c-means introduced by Bezdek (Pattern recognition with fuzzy objective function algorithms, 1981), a fuzzification of the k-means or ISODATA algorithm. On the other hand, several research issues have been raised regarding both the objective function to be minimized and the optimization constraints, which help to identify proper cluster shape (Jain et al., ACM Computing Survey 31(3):264–323, 1999). This paper addresses the issue of clustering by evaluating the distance of fuzzy sets in a feature space. Especially, the fuzzy clustering optimization problem is reformulated when the distance is rather given in terms of divergence distance, which builds a bridge to the notion of probabilistic distance. This leads to a modified fuzzy clustering, which implicitly involves the variance–covariance of input terms. The solution of the underlying optimization problem in terms of optimal solution is determined while the existence and uniqueness of the solution are demonstrated. The performances of the algorithm are assessed through two numerical applications. The former involves clustering of Gaussian membership functions and the latter tackles the well-known Iris dataset. Comparisons with standard fuzzy c-means (FCM) are evaluated and discussed.     

CL.E.KMODES: a modified <Emphasis Type="Italic">k</Emphasis>-modes clustering algorithm

In this paper we present a new method for clustering categorical data sets named CL.E.KMODES. The proposed method is a modified k-modes algorithm that incorporates a new four-step dissimilarity measure, which is based on elements of the methodological framework of the ELECTRE I multicriteria method. The four-step dissimilarity measure introduces an alternative and more accurate way of assigning objects to clusters. In particular, it compares each object with each mode, for every attribute that they have in common, and then chooses the most appropriate mode and its corresponding cluster for that object. Seven widely used data sets are tested to verify the robustness of the proposed method in six clustering evaluation measures.     

Soft clustering – Fuzzy and rough approaches and their extensions and derivatives

Clustering is one of the most widely used approaches in data mining with real life applications in virtually any domain. The huge interest in clustering has led to a possibly three-digit number of algorithms with the k-means family probably the most widely used group of methods. Besides classic bivalent approaches, clustering algorithms belonging to the domain of soft computing have been proposed and successfully applied in the past four decades. Bezdek’s fuzzy c-means is a prominent example for such soft computing cluster algorithms with many effective real life applications. More recently, Lingras and West enriched this area by introducing rough k-means. In this article we compare k-means to fuzzy c-means and rough k-means as important representatives of soft clustering. On the basis of this comparison, we then survey important extensions and derivatives of these algorithms; our particular interest here is on hybrid clustering, merging fuzzy and rough concepts. We also give some examples where k-means, rough k-means, and fuzzy c-means have been used in studies.     

Competitive algorithms for the clustering of noisy data

In this paper, we consider the issue of clustering when outliers exist. The outlier set is defined as the complement of the data set. Following this concept, a specially designed fuzzy membership weighted objective function is proposed and the corresponding optimal membership is derived. Unlike the membership of fuzzy c-means, the derived fuzzy membership does not reduce with the increase of the cluster number. With the suitable redefinition of the distance metric, we demonstrate that the objective function could be used to extract c spherical shells. A hard clustering algorithm alleviating the prototype under-utilization problem is also derived. Artificially generated data are used for comparisons.     

A modified fuzzy clustering for documents retrieval: application to document categorization

The paper advocates the use of a new fuzzy-based clustering algorithm for document categorization. Each document/datum will be represented as a fuzzy set. In this respect, the fuzzy clustering algorithm, will be constrained additionally in order to cluster fuzzy sets. Then, one needs to find a metric measure in order to detect the overlapping between documents and the cluster prototype (category). In this respect, we use one of the interclass probabilistic reparability measures known as Bhattacharyya distance, which will be incorporated in the general scheme of the fuzzy c-means algorithm for measuring the overlapping between fuzzy sets. This enables the introduction of fuzziness in the document clustering in the sense that it allows a single document to belong to more than one category. This is in line with semantic multiple interpretations conveyed by single words, which support multiple membership to several classes. Performances of the algorithms will be illustrated using a case study from the construction sector.     

土壤分类的模糊集成算法与应用

土壤是一个多性状的连续体,其分类的首选方法是模糊聚类分析.但是模糊聚类分析中现有的基于模糊等价关系的动态聚类法和模糊c-均值法各有利弊,采用其中一种方法聚类肯定存在不足.为此集成两种聚类方法的优点,避其缺点,提出了用基于模糊等价关系的动态聚类方法和方差分析方法确定聚类数目和初始聚类中心,再用模糊c-均值法决定最终分类结果的集成算法,并将其应用到松花江流域土壤分类中,得到了较为切合实际的分类结果.     

硬聚类和模糊聚类的结合——双层FCM快速算法

模糊c均值(FCM)聚类算法在模式识别领域中得到了广泛的应用,但FCM算法在大数据集的情况下需要大量的CPU时间,令用户感到十分不便,提高算法的速度是一个急待解决的问题。本文提出的双层FCM聚类算法是一种快速算法,它体现了硬聚类和模糊聚类的结合,以硬聚类的结果对模糊聚类的初始值进行指导,从而明显地缩短了迭代过程。双层FCM算法所用的CPU时间仅为FCM算法的十三分之一,因而具有很强的实用价值。     

Kernel-based fuzzy clustering and fuzzy clustering: A comparative experimental study

In this study, we present a comprehensive comparative analysis of kernel-based fuzzy clustering and fuzzy clustering. Kernel based clustering has emerged as an interesting and quite visible alternative in fuzzy clustering, however, the effectiveness of this extension vis-à-vis some generic methods of fuzzy clustering has neither been discussed in a complete manner nor the performance of clustering quantified through a convincing comparative analysis. Our focal objective is to understand the performance gains and the importance of parameter selection for kernelized fuzzy clustering. Generic Fuzzy C-Means (FCM) and Gustafson–Kessel (GK) FCM are compared with two typical generalizations of kernel-based fuzzy clustering: one with prototypes located in the feature space (KFCM-F) and the other where the prototypes are distributed in the kernel space (KFCM-K). Both generalizations are studied when dealing with the Gaussian kernel while KFCM-K is also studied with the polynomial kernel. Two criteria are used in evaluating the performance of the clustering method and the resulting clusters, namely classification rate and reconstruction error. Through carefully selected experiments involving synthetic and Machine Learning repository (http://archive.ics.uci.edu/beta/) data sets, we demonstrate that the kernel-based FCM algorithms produce a marginal improvement over standard FCM and GK for most of the analyzed data sets. It has been observed that the kernel-based FCM algorithms are in a number of cases highly sensitive to the selection of specific values of the kernel parameters.     

基于FCM算法的小脑基因模糊聚类分析

探讨基因表达数据的聚类分析方法,结合一种聚类结果的评判准则,应用于胎儿小脑基因表达数据,得到了最优的聚类结果,并做出了生物学解释.利用Matlab软件进行了仿真,利用模糊聚类Xie-Beni指数得到了最优聚类数,并把每一类对应的基因标号输出到txt文件,最后进行生物学解释.得到的小脑基因最优聚类数为3类,与生物学意义比较吻合,各类中的基因功能接近.基于FCM算法的基因模糊聚类是有效的,结果具有一定生物学意义,能对生物学基因聚类有一定指导作用.     

Fitting semiparametric clustering models to dissimilarity data

The cluster analysis problem of partitioning a set of objects from dissimilarity data is here handled with the statistical model-based approach of fitting the “closest” classification matrix to the observed dissimilarities. A classification matrix represents a clustering structure expressed in terms of dissimilarities. In cluster analysis there is a lack of methodologies widely used to directly partition a set of objects from dissimilarity data. In real applications, a hierarchical clustering algorithm is applied on dissimilarities and subsequently a partition is chosen by visual inspection of the dendrogram. Alternatively, a “tandem analysis” is used by first applying a Multidimensional Scaling (MDS) algorithm and then by using a partitioning algorithm such as k-means applied on the dimensions specified by the MDS. However, neither the hierarchical clustering algorithms nor the tandem analysis is specifically defined to solve the statistical problem of fitting the closest partition to the observed dissimilarities. This lack of appropriate methodologies motivates this paper, in particular, the introduction and the study of three new object partitioning models for dissimilarity data, their estimation via least-squares and the introduction of three new fast algorithms.     

用于聚类有效性判定的包含度公式

对基于模糊集合定义的若干包含度公式在聚类有效性方面的性质进行讨论 ,并对分类性能进行实验 ,筛选出两个有应用价值的包含度公式。