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1.
We investigated the coordination self-assembly and metalation reaction of Cu with 5,10,15,20-tetra(4-pyridyl)porphyrin (2HTPyP) on a Au(111) surface by means of scanning tunneling microscopy, X-ray photoelectron spectroscopy, and density functional theory calculations. 2HTPyP was found to interact with Cu through both the peripheral pyridyl groups and the porphyrin core. Pairs of pyridyl groups from neighboring molecules coordinate Cu(0) atoms, which leads to the formation of a supramolecular metal-organic coordination network. The network formation occurs at room temperature; annealing at 450 K enhances the process. The interaction of Cu with the porphyrin core is more complex. At room temperature, formation of an initial complex Cu(0)-2HTPyP is observed. Annealing at 450 K activates an intramolecular redox reaction, by which the coordinated Cu(0) is oxidized to Cu(II) and the complex Cu(II)TPyP is formed. The coordination network consists then of Cu(II) complexes linked by Cu(0) atoms; that is, it represents a mixed-valence two-dimensional coordination network consisting of an ordered array of Cu(II) and Cu(0) centers. Above 520 K, the network degrades and the Cu atoms in the linking positions diffuse into the substrate, while the Cu(II)TPyP complexes form a close-packed structure that is stabilized by weak intermolecular interactions. Density functional theory investigations show that the reaction with Cu(0) proceeds via formation of an initial complex between metal atom and porphyrin followed by formation of Cu(II) porphyrin within the course of the reaction. The activation barrier of the rate limiting step was found to be 24-37 kcal mol(-1) depending on the method used. In addition, linear coordination of a Cu atom by two CuTPyP molecules is favorable according to gas-phase calculations.  相似文献   

2.
The electronic structure and bonding in the noncovalent, supramolecular complexes of fullerene C60 with a series of first-row transition metal porphines MP (M=Fe, Co, Ni, Cu, Zn) have been re-examined with DFT methods. A dispersion correction was made for the C60-MP binding energy through an empirical method (J. Comput. Chem. 2004, 25, 1463). Several density functionals and two types of basis sets were employed in the calculations. Our calculated results are rather different from those obtained in a recent paper (J. Phys. Chem. A 2005, 109, 3704). The ground state of C60.FeP is predicted to be high spin (S=2); the low-spin (S=0), closed-shell state is even higher in energy than the intermediate-spin (S=1) state. With only one electron in the Co-dz2 orbital, the calculated Co-C60 distance is in fact rather short, about 0.1 A longer than the Fe-C60 distance in high-spin C60.FeP. Double occupation of an M-dz2 orbital in MP prevents close association of any axial ligand, and so the Ni-C60, Cu-C60, and Zn-C60 distances are much longer than the Co-C60 one. The evaluated MP-C60 binding energies (Ebind) are 0.8 eV (18.5 kcal/mol) for M=Fe/Co and 0.5 eV (11.5 kcal/mol) for M=Ni/Cu/Zn (Ebind is about 0.2 eV larger in the case of C60-MTPP). They are believed to be reliable and accurate based on our dispersion-corrected DFT calculations that included the counterpoise (CP) correction. The effects of the C60 contact on the redox properties of MP were also examined.  相似文献   

3.
Summary The catalytic effects of peroxidase-like metalloporphyrins (Me-P) on the fluorescence reaction of homovanillic acid with hydrogen peroxide have been studied. These metalloporphyrins are the complexes of Mn with tetrakis(carboxyphenyl)porphyrin (TPPC) and trikis(sulfophenyl)porphyrin(TPPS3), Fe, Co, Ni, Cu, Zn, Ag and Sn with tetrakis(sulfophenyl)porphyrin(TPPS4), and Rh, Pt and Pd with tetrakis(N-methylpyridiniumyl)porphyrin-(TMPyP) and hemin. The complexes of Mn, Fe, Co, Rh and Pt with porphyrins catalyzed the formation of the fluorescence product, while the complexes of Ni, Cu, Zn, Ag, Sn and Pd did not. Traces of hydrogen peroxide and glucose can be determined using the metalloporphyrins. The characteristics of peroxidase-like metalloporphyrins have been compared with those of horseradish peroxidase (HRP).  相似文献   

4.
选取8个典型的二价金属咪唑卟啉MP(M=Ca, Mg, Zn, Cu, Ni, Fe, Co, Mn; P代表咪唑卟啉)与H2S(L)形成轴向金属配合物(L-MP; L-MP*-L, P*代表卟啉), 应用轨道和自旋概念密度泛函工具, 在优化构型的基础上, 通过自然键轨道(NBO)方法和前线轨道能级研究了它们的分子结构、光谱性质和反应活性. 模拟结果揭示L-MP和L-MP*-L结构、光谱及其反应活性不同于其前体MP. MP排斥钙而选择镁; L对MP的结构影响较少, 与咪唑铁卟啉(FeP)能形成最稳定的单轴配合物(L-FeP), 其电子吸收光谱较前体FeP有显著的变化; 铁的亲核Fukui轨道指数值(fFe+)大于其他原子的Fukui指数, 且发生符号改变. 铁体系的自旋极化Fukui密度图也支持以上结论. 在这些典型的赤道键合配合物中, 金属M与N(S)原子之间的二级微扰相互作用能、自然电荷以及概念密度泛函指数等存在一系列线性关系. 以上结果可为理解内源性H2S与血管性物质的相互作用机理提供启示.  相似文献   

5.
朱苗力  卢丽萍  杨频 《化学学报》2004,62(8):783-788
二甲双胍盐酸盐、硝酸盐及与Zn2+, Cu2+, Ni2+三种金属离子配合物的结构特点、电荷分布和二甲双胍配合物对四氧嘧啶糖尿病小鼠血糖影响的研究表明:Zn2+配合物表现为较为少见的单齿配位,而Cu2+, Ni2+配合物表现为双齿配位.进一步电荷分布计算发现,与端基N原子相比,二甲双胍的桥基N原子具有较高的负电荷.三种金属离子配合物对四氧嘧啶糖尿病小鼠血糖的影响研究显示,桥基N配位掩蔽后,二甲双胍的降血糖功能丧失.说明桥基N对二甲双胍的降血糖作用具有重要意义.  相似文献   

6.
Metalation reaction of metal-free phthalocyanine molecule with Co atom adsorbed on Au(111) surface has been studied in situ at single atom/molecule scale by low-temperature scanning tunneling microscopy (STM) experiment combined with simulations based on density function theory calculations. Through manipulations using STM tip, we showed a controlled manner to have a single metal-free phthalocyanine molecule react with a Co atom to form Co phthalocyanine molecule. In this reaction process, an intermediate state originating from $\pi$-d interaction between the metal-free phthalocyanine molecule and Co atom has been identified. Moreover, we also revealed that the redox reaction represented as bond breaking and bond forming relative to the Co and pyrrolic N atoms, not pyrrolic H atoms, is a key process for dehydrogenation and metalation reaction. Our DFT calculations provided theoretical supporting for the above conclusions, and further understanding of the related mechanisms.  相似文献   

7.
We performed DFT calculations (BLYP general-gradient approximation in conjunction with a double numerical basis set) for the interaction of free porphine ligand and a number of its metal complexes with C60 molecule to analyze how the nature of a central metal ion influences the geometry and electronic characteristics (electrostatic potential and spin density distribution and highest-occupied molecular orbital (HOMO) and lowest-unoccupied molecular orbital (LUMO) structure). We found that the presence of a central metal ion is crucial for a strong interaction. The energy of interaction between H2P and C60 is -0.3 kcal mol(-1) only, whereas the formation energies for the metal complexes vary from -27.3 kcal mol(-1) for MnClP.C60 to -45.8 kcal mol(-1) for MnP.C60. As a rule, the formation energy correlates with the separations between porphinate and fullerene molecules; the Mn and Fe complexes exhibit the closest approach of ca. 2.2 A between the metal ion and carbon atoms of C60. In most porphine-C60 complexes studied, the two closest contacts of central metal ion or H are those with carbon atoms of the (6,6) bond; VOP.C60 is the only exception, where the closest V...C contacts involve the (5,6) bond. The macrocycle geometry changes, and the magnitude of the effect depends on the central atom, being especially dramatic for Mn, MnCl, and Fe complexes. The shape of LUMOs in most complexes with C60 is not affected notably as compared to the LUMO of the isolated C60 molecule. In the case of Fe, the HOMO extends from the central atom to two opposite pyrrol rings. At the same time, the HOMO-LUMO gap energy decreases drastically in most cases, by ca. 20-30 kcal mol(-1). For electrostatic potential distribution, we systematically observed that the negative lobe contacting C60 shrinks, whereas the opposite one becomes notably bigger. In the case of paramagnetic complexes of VO, Mn, FeCl, Co, and Cu, spin density distribution was analyzed as well.  相似文献   

8.
A series of model theoretical calculations are described that suggest a new mechanism for the oxidation step in enzymatic cytochrome P450 hydroxylation of saturated hydrocarbons. A new class of metastable metal hydroperoxides is described that involves the rearrangement of the ground-state metal hydroperoxide to its inverted isomeric form with a hydroxyl radical hydrogen bonded to the metal oxide (MO-OH --> MO....HO). The activation energy for this somersault motion of the FeO-OH group is 20.3 kcal/mol for the P450 model porphyrin iron(III) hydroperoxide [Por(SH)Fe(III)-OOH(-)] to produce the isomeric ferryl oxygen hydrogen bonded to an *OH radical [Por(SH)Fe(III)-O....HO(-)]. This isomeric metastable hydroperoxide, the proposed primary oxidant in the P450 hydroxylation reaction, is calculated to be 17.8 kcal/mol higher in energy than the ground-state iron(III) hydroperoxide Cpd 0. The first step of the proposed mechanism for isobutane oxidation is abstraction of a hydrogen atom from the C-H bond of isobutane by the hydrogen-bonded hydroxyl radical to produce a water molecule strongly hydrogen bonded to anionic Cpd II. The hydroxylation step involves a concerted but nonsynchronous transfer of a hydrogen atom from this newly formed, bound, water molecule to the ferryl oxygen with a concomitant rebound of the incipient *OH radical to the carbon radical of isobutane to produce the C-O bond of the final product, tert-butyl alcohol. The TS for the oxygen rebound step is 2 kcal/mol lower in energy than the hydrogen abstraction TS (DeltaE() = 19.5 kcal/mol). The overall proposed new mechanism is consistent with a lot of the ancillary experimental data for this enzymatic hydroxylation reaction.  相似文献   

9.
Stable geometries, electronic structures, and magnetic properties of the ZnO monolayer doped with 3d transition‐metal (TM) (Sc, Ti, V, Cr, Mn, Fe, Co, Ni, and Cu) atoms substituting the cation Zn have been investigated using first‐principles pseudopotential plane wave method within density functional theory (DFT). It is found that these nine atomic species can be effectively doped in the ZnO monolayer with formation energies ranging from ?6.319 to ?0.132 eV. Furthermore, electronic structures and magnetic properties of ZnO monolayer can be modified by such doping. The results show that the doping of Cr, Mn, Fe, Co, Ni, and Cu atoms can induce magnetization, while no magnetism is observed when Sc, Ti, and V atoms are doped into the ZnO monolayer. The magnetic moment is mainly due to the strong p–d mixing of O and TM (Cr, Mn, Fe, Co, Ni, and Cu) orbitals. These results are potentially useful for spintronic applications and the development of magnetic nanostructures. © 2013 Wiley Periodicals, Inc.  相似文献   

10.
New metal(II)-thiolate complexes supported by the tetradentate ligand 1,5-bis(2-pyridylmethyl)-1,5-diazacyclooctane (L(8)py(2)) have been synthesized and subjected to physical, spectroscopic, structural, and computational characterization. The X-ray crystal structures of these complexes, [L(8)py(2)M(S-C(6)H(4)-p-CH(3))]BPh(4) (M = Co, Ni, Zn), reveal distorted square-pyramidal divalent metal ions with four equatorial nitrogen donors from L(8)py(2) and axial p-toluenethiolate ligands. The reactions of the complexes with benzyl bromide produce isolable metal(II)-bromide complexes (in the cases of Co and Ni) and the thioether benzyl-p-tolylsulfide. This reaction is characterized by a second-order rate law (nu = k(2)[L(8)py(2)M(SAr)(+)][PhCH(2)Br]) for all complexes (where M = Fe, Co, Ni, or Zn). Of particular significance is the disparity between k(2) for M = Fe and Co versus k(2) for M = Ni and Zn, in that k(2) for M = Ni and Zn is ca. 10 times larger (faster) than k(2) for M = Fe and Co. An Eyring analysis of k(2) for [L(8)py(2)Co(SAr)](+) and [L(8)py(2)Ni(SAr)](+) reveals that the reaction rate differences are not rooted in a change in mechanism, as the reactions of these complexes with benzyl bromide exhibit comparable activation parameters (M = Co: DeltaH() = 45(2) kJ mol(-)(1), DeltaS() = -144(6) J mol(-)(1) K(-)(1); M = Ni: DeltaH() = 43(3) kJ mol(-)(1), DeltaS() = -134(8) J mol(-)(1) K(-)(1)). Electronic structure calculations using density functional theory (DFT) reveal that the enhanced reaction rate for [L(8)py(2)Ni(SAr)](+) is rooted in a four-electron repulsion (or a "filled/filled interaction") between a completely filled nickel(II) d(pi) orbital and one of the two thiolate frontier orbitals, a condition that is absent in the Fe(II) and Co(II) complexes. The comparable reactivity of [L(8)py(2)Zn(SAr)](+) relative to that of [L(8)py(2)Ni(SAr)](+) arises from a highly ionic zinc(II)-thiolate bond that enhances the negative charge density on the thiolate sulfur. DFT calculations on putative thioether-coordinated intermediates reveal that the Co(II)- and Zn(II)-thioethers exhibit weaker M-S bonding than Ni(II). These combined results suggest that while Ni(II) may serve as a competent replacement for Zn(II) in alkyl group transfer enzymes, turnover may be limited by slow product release from the Ni(II) center.  相似文献   

11.
Transition metal complexes of meso-tetra (4-myristyloxyphenyl)porphyrin TMPPM′ [M′=Mn, Fe, Co, Ni, Cu, Zn ; TMPP=mesotetra (4-myristyloxyphenyl)porphyrin] have been synthesized and characterized by means of elemental analyses, UV-Vis spectra, infrared photoacoustic spectra, ^1H NMR spectra, molar conductance and differential scanning calorimetry(DSC). The ligand and the Zn complex show liquid crystalline behavior. According to the DSC thermogram of the Zn complex, it exhibits a lower phase transition temperature -7. 453℃ and a wide mesophase temperature span, 77℃.  相似文献   

12.
The novel crown-containing porphyrin 5-{4-[(4-hydroxybenzo-15-crown-5)-5-yldiazo]phenyl}-10,15,20-triphenylporphyrin (H3L) and its transition metal complexes MHL (M = Co(II), Ni(II), Cu(II), and Zn(II)) and AgH2L were obtained. The compositions and structures of all the compounds were studied by MALDI-TOF mass spectroscopy, electronic absorption and IR spectroscopy. The diamagnetic compounds were additionally characterized by 1H NMR spectroscopy. It was proved that Co(II), Ni(II), Cu(II), and Zn(II) are coordinated through the pyrrole N atoms, while Ag(I) is coordinated through the hydroxyl O atom and the diazo N atom of H3L.  相似文献   

13.
The porosity and hydrogen storage properties for the dehydrated Prussian blue analogues M3[Co(CN)6]2 (M = Mn, Fe, Co, Ni, Cu, Zn) are reported. Argon sorption isotherms measured at 87 K afford BET surface areas ranging from 560 m2/g for Ni3[Co(CN)6]2 to 870 m2/g for Mn3[Co(CN)6]2; the latter value is comparable to the highest surface area reported for any known zeolite. All six compounds show significant hydrogen sorption at 77 K and 890 Torr, varying from 1.4 wt % and 0.018 kg H2/L for Zn3[Co(CN)6]2 to 1.8 wt % and 0.025 kg H2/L for Cu3[Co(CN)6]2. Fits to the sorption data employing the Langmuir-Freundlich equation give maximum uptake quantities, resulting in a predicted storage capacity of 2.1 wt % and 0.029 kg H2/L for Cu3[Co(CN)6]2 at saturation. Enthalpies of adsorption for the frameworks were calculated from hydrogen isotherms measured at 77 and 87 K and found to increase with M varying in the order Mn < Zn < Fe < Co < Cu < Ni. In all cases, the binding enthalpies, which lie in the range of 5.3-7.4 kJ/mol, are higher than the 4.7-5.2 kJ/mol measured for Zn4O(1,4-benzenedicarboxylate)3.  相似文献   

14.
A series of transition metal chloro complexes with the tetradentate tripodal tris(2-amino-oxazoline)amine ligand (TAO) have been synthesized and characterized. X-Ray structural analyses of these compounds demonstrate the formation of the mononuclear complexes [M(II)(TAO)(Cl)](+), where M(II) = Cr, Mn, Fe, Co, Ni, Cu and Zn. These complexes exhibit distorted trigonal-bipyramidal geometry, coordinating the metal through an apical tertiary amine, three equatorial imino nitrogen atoms, and an axial chloride anion. All the complexes possess an intramolecular hydrogen-bonding (H-bonding) network within the cavity occupied by the metal-bound chloride ion. The metal-chloride bond distances are atypically long, which is attributed to the effects of the H-bonding network. Nuclear magnetic resonance (NMR) spectroscopy of the Zn complex suggests that the solid-state structures are representative of that observed in solution, and that the H-bonding interactions persist as well. Additionally, density functional theory (DFT) calculations were carried out to probe the electronic structures of the complexes.  相似文献   

15.
The reaction of laser-ablated vanadium, niobium and tantalum atoms with hydrogen sulfide has been investigated using matrix isolation FTIR and theoretical calculations. The metal atoms inserted into the H-S bond of H2S to form the HMSH molecules (M=V, Nb, Ta), which rearranged to H2MS molecules on annealing for Nb and Ta. The HMSH molecule can also further react with another H2S to form the H2M(SH)2 molecules. These new molecules were identified on the basis of the D2S and H234S isotopic substitutions. DFT (B3LYP and BPW91) theoretical calculations are used to predict energies, geometries, and vibrational frequencies for these novel metal dihydrido complexes and molecules. Reaction mechanism for formation of group V dihydrido complex was investigated by DFT internal reaction coordinate calculations. The dissociation of HVSH gave VS+H2 on broad band irradiation and reverse reaction happened on annealing. Based on B3LYP calculation releasing hydrogen from HVSH is endothermic only by 13.5 kcal/mol with lower energy barrier of 16.9 kcal/mol.  相似文献   

16.
The interaction of the cyclic nonapeptide oxytocin (OT) with a number of alkaline earth and divalent transition metal ions (X(2+)) was examined employing mass spectrometry (MS) and ion mobility spectrometry (IMS) techniques in combination with molecular dynamics (MD) and density functional theory (DFT) calculations. Under acidic conditions it was found that OT exhibits an exceptionally strong affinity for all divalent metal ions resulting in strong [OT + X](2+) peaks in the mass spectrum. Under basic conditions only Cu(2+) and Ni(2+)-OT complexes were detected and these were singly, doubly, triply, or quadruply deprotonated. Collision-induced dissociation of the [OT - 3H + Cu](-) complex yielded exclusively C-terminal Cu(2+)-containing fragments (Cu(2+)fragment(3-)), suggesting that the Cu(2+) ligation site includes deprotonated C-terminal backbone amide nitrogen atoms and the N-terminal amino nitrogen atom in [OT - 3H + Cu](-). MD and DFT calculations indicate a square-planar complex is consistent with these observations and with experimental collision cross sections. MD and DFT calculations also indicate either an octahedral or trigonal-bipyramidal complex between Zn(2+) and OT is lowest in energy with carbonyl oxygens being the primary ligation sites. Both complexes yield cross sections in agreement with experiment. The biological impact of the structural changes induced in OT by divalent metal ion coodination is discussed.  相似文献   

17.
We have performed first-principle density functional theory calculations to investigate how a subsurface transition metal M (M = Ni, Co, or Fe) affects the energetics and mechanisms of oxygen reduction reaction (ORR) on the outermost Pt mono-surface layer of Pt/M(111) surfaces. In this work, we found that the subsurface Ni, Co, and Fe could down-shift the d-band center of the Pt surface layer and thus weaken the binding of chemical species to the Pt/M(111) surface. Moreover, the subsurface Ni, Co, and Fe could modify the heat of reaction and activation energy of various elementary reactions of ORR on these Pt/M(111) surfaces. Our DFT results revealed that, due to the influence of the subsurface Ni, Co, and Fe, ORR would adopt a hydrogen peroxide dissociation mechanism with an activation energy of 0.15 eV on Pt/Ni(111), 0.17 eV on Pt/Co(111), and 0.16 eV on Pt/Fe(111) surface, respectively, for their rate-determining O2 protonation reaction. In contrast, ORR would follow a peroxyl dissociation mechanism on a pure Pt(111) surface with an activation energy of 0.79 eV for its rate-determining O protonation reaction. Thus, our theoretical study explained why the subsurface Ni, Co, and Fe could lead to multi-fold enhancement in catalytic activity for ORR on the Pt mono-surface layer of Pt/M(111) surfaces.  相似文献   

18.
The inner surface of fused silica capillaries has been covalently modified with different porphyrins (deuteroporphyrin, complexes of deuteroporphyrin with metal ions Fe(III), Cu(II), Zn(II), Ni(II), and Cu(II)-meso-tetra (carboxyphenyl) porphyrin) and it was applied for the separation of biologically active peptides by open-tubular capillary electrochromatography. Separations were performed in a mobile phase composed of 25?mM potassium phosphate, pH 4.0, 5%?v/v ACN and 10?mM hydroquinone. Changes in the effective electrophoretic mobility of peptides were studied concerning porphyrin central metal atom, attachment geometry, and the presence of coordinating or aromatic amino acid residues in the peptide sequence. The results showed that differences in metal core on the porphyrin and the spatial conformation of attached porphyrin result in changes in the analyte interaction with the stationary phase.  相似文献   

19.
Heterometallic complexes Fe2MO(Piv)6(HPiv)3 (M = Ni, Co) have been studied by XPS. The complexes are identified as high-spin complexes with metal atoms in oxidation states M(II) and M(III). A change in the ligand environment of metal atoms has an effect on both the energetic state of metal atoms and the XPS pattern. The substitution of a Co atom for the nickel atom in the heterometallic complexes changes the XPS pattern of iron and their magnetic state. For the Fe2MO(Piv)6(HPiv)3 complexes, quantum-chemical calculations have been performed at the density functional theory (DFT) level. In combination with XPS and magnetochemistry data, the quantum-chemical calculation demonstrates that the Fe, Ni, and Co atoms in the trinuclear complexes are in the high-spin local state and that the ground state is dominated by antiferromagnetic exchange interaction.  相似文献   

20.
The stability of the Pt-3d-Pt(111) (3d = Ti, V, Cr, Mn, Fe, Co, or Ni) bimetallic surface structures in the presence of adsorbed oxygen has been investigated by means of density functional theory (DFT). The dissociative binding energies of oxygen on Pt-3d-Pt(111) (i.e., subsurface 3d monolayer) and 3d-Pt-Pt(111) (i.e., surface 3d monolayer) were calculated. All of the Pt-3d-Pt(111) surfaces were found to have weaker oxygen binding energies than pure Pt(111) whereas all of the 3d-Pt-Pt(111) surfaces were found to have stronger oxygen binding energies than pure Pt(111). The total heat of reaction was calculated for the segregation for 3d metal atoms from Pt-3d-Pt(111) to 3d-Pt-Pt(111) when exposed to a half monolayer of oxygen. All of the Pt-3d-Pt(111) subsurface structures were predicted to be thermodynamically unstable with adsorbed oxygen. In addition, the segregation of subsurface Ni and Co to the surfaces of Pt-Ni-Pt(111) and Pt-Co-Pt(111) was investigated experimentally using Auger electron spectroscopy (AES) and high-resolution electron energy loss spectroscopy (HREELS). AES and HREELS confirmed the trend predicted by DFT modeling and showed that both the Pt-Ni-Pt(111) and Pt-Co-Pt(111) surface structures were unstable in the presence of adsorbed oxygen. The activation barrier of the segregation of surbsurface Ni and Co atoms was determined to be 15 +/- 2 and 7 +/- 1 kcal/mol, respectively. These results are further discussed for their implication in the design and selection of cathode bimetallic electrocatalysts for the oxygen reduction reaction (ORR) in polymer electrode membrane (PEM) fuel cells.  相似文献   

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