Structure cristalline et conformation en solution aqueuse de la carnosine (β-alanyl-L-histidine)

Carnosine (β-alanyl-L-histidine) is a biologically active molecule involved in muscular metabolism. It crystallises in the C; space group with a = 24.725 Å b = 5,427 Å c = 8,004 Å β = 100,2° (Z = 4)

In the crystal, acid and basic groups are engaged in hydrogen bonds whose strength is evaluated through IR frequencies. Molecular conformation in the solid state is defined by τ₁ = /t-177° τ₂ = −38° φ = −96° ψ = +131° χ₁ = 181° χ₂₁ = 62°

NMR study of carnosine in aqueous solution indicates that rotation about CH₂-CH₂ is free and that the other angles take the following values: Ø −150° or −90° and X₁ = 165° or 315°. Infrared and Raman spectra suggest that τ₂ undergoes small changes when going from crystal to solution while ψ is close to +150°.     

Anionic derivatives of pentafluoro-λ-sulfanyl (fluorosulfonyl) acetic acid esters

New ester salts [R₃NH]⁺[F₅SC(SO₂F)C(O)OR′]⁻ where RH, CH₃CH₂ and R′CH₃,(CH₃)₂CH have been prepared from corresponding esters and amines. The sodiumsalt Na[F₅SC(SO₂F)C(O)OCH(CH₃)₂] was used to prepare the following -substitutedderivatives: SF₅CX(SO₂F)C(O)OCH(CH₃)₂, XBr, Cl. The crystal structure of[(C₂H₅)₃NH]⁺[F₅SC(SO₂F)C(O)OCH₃]⁻ was determined and is monoclinic: P2₁/n;a=8.758(2) Å, b=9.645(2) Å and c=19.167(4) Å; β=97.92(3)°; V=1603.6 ų; Z=4.     

Crystal structure of new hydroxide fluorides with isolated F anions: [H3N(CH2)6NH3]2M(F, OH)6(F,OH)·H2O (M = Al, In)

The synthesis and structural characterization of new hydroxo-fluorometallates [H₃N(CH₂)₆NH₃]₂M(F,OH)₇·H₂O (M=Al, In) are presented. Their preparation is achieved in solvothermal conditions by microwave or classical heating. The isotopic structures, determined by single crystal X-ray diffraction, are triclinic with the space group P–1. The structural arrangement can be described from isolated MX₆ (X=F, OH) octahedra connected by diprotonated diaminohexane via a complex network of hydrogen bonds. X⁻ anions and water molecules are found between the organic chains. A study by ¹⁹F NMR of the Al compound confirms a statistical occupancy of fluorine sites by hydroxyl groups and the occurrence of isolated F⁻ anions.     

Hydrogen bonds in the crystal packings of mesalazine and mesalazine hydrochloride

The crystal structures of pharmaceutical product mesalazine (marketed also under different proprietary names as Salofalk, Asacol, Asacolitin, and Claversal) and its hydrochloride are reported. In the crystal mesalazine is in zwitterion form as 5-ammoniosalicylate (1) whereas mesalazine hydrochloride crystallizes in an ionized form as 5-ammoniosalicylium chloride (2). Compound 1 (C₇H₇O₃N) crystallizes in the monoclinic space group P2₁/n with a = 3.769(1) Å, b = 7.353(2) Å, c = 23.475(5) Å, β = 94.38(2)°, V = 648.7(8) ų, Z = 4, D_c = 1.568 g cm⁻³ and μ(MoK) = 1.2 cm⁻¹. Compound 2 (C₇H₈O₃NCl) crystallizes in the triclinic space group P with a = 4.4839(2) Å, b = 5.7936(2) Å, c = 15.6819(5) Å, = 81.329(3)°, β = 88.026(3)°, γ = 79.317(4)°, V = 395.74(3) ų, Z = 2, D_c = 1.591 g cm⁻³ and μ(CuK) = 40.8 cm⁻¹. The crystal structures were solved by direct methods and refined to R = 0.041 for 1 and 0.028 for 2, using 607 and 1374 observed reflections, respectively. The configuration of both molecules, with the ortho hydroxyl to a carboxyl group, favours the intramolecular hydrogen bonds. Very complex systems of intermolecular hydrogen bonds were observed in both crystal packings. They are discussed in terms of graph-set notation. The mesalazine crystal structure is characterized by two-dimensional network of hydrogen bonds in the ab plane. The crystal structure pattern of mesalazine hydrochloride is a three-dimensional network significantly supported by N⁺---HCl⁻ interactions.     

Mercury(II) halide adducts of an olefinic double betaine: [{Hg2L2X4·6HgX2}n] [X = Cl, Br; L = cis-(p-Me2NC5H4N)2C2(COO)2]

Two polymeric mercury(II) halide adducts of an olefinic double betaine, cis-(p-Me₂NC₅H₄N⁺)₂C₂(COO⁻)₂ (L), have been prepared and characterized by X-ray crystallography. [{Hg₂L₂Cl₄·6HgCl₂}_n] (1) crystallizes in the monoclinic space group C2/c with Z = 4, and [{Hg₂L₂Br₄·HgBr₂}_n] (2) in the triclinic space group P with Z = 1. Complexes 1 and 2 are structurally similar, being composed of centrosymmetric fourteen-membered rings and nearly linear HgX₂ (X = Cl, Br) moieties that are further inter-linked by weak HgX [HgCl = 2.930–3.136(9) Å, HgBr = 3.057–3.310(6) Å] and HgO [2.64, 2.75(3) Å] bonds to generate a two-dimensional polymeric network.     

Metallorganische verbindungen der lanthanoide LVIII. Zur struktur des dicyclopentadienyl-bis(trimethylsilyl)lutetat-anions

(C₅H₅)₂Lu(μ-Cl₂)Na(dme)₂ reacts with LiSi(CH₃)₃ in dimethoxyethane with formation of [Li(dme)₃][(C₅H₅)₂Lu(Si(CH₃)₃)₂]. The crystal structure study shows the compound to consist of discrete ions [Li(dme)₃]⁺ and [(C₅H₅)₂Lu(Si(CH₃)₃)₂]⁻. The compound crystallizes in the space group P2/n with a 14.497(5) b 9.041(2), c 14.672(6) Å, β 103.85(3)° and V 1867(2) ų. The crystal and molecular structure was refined to R = 0.0473 for 2491 observed reflections with F_o 3σ(F_o).     

尿素-富马酸根-水分子为主体晶格的四乙基铵离子包合物的合成与晶体结构

合成一种新的尿素-阴离子复合主体晶格包合物,(C₂H₅)₄N⁺[C₄H₂O₄^2-]1/2·CO(NH₂)₂·H₂O,并进行了X射线晶体结构分析.晶体为单斜晶系,C₂/_c(No.15)空间群,a=1.7909(5)nm,b=1.4431(4)nm,c=1.4443(3)nm,β=126.76(2)°,V=2.9905(13)nm³,Z=4,R₁=0.0647,_wR=0.0735.包合物中,两个尿素分子通过一对N-H…O氢键以通常的“肩并肩”方式连接起来,形成一个二聚体.这些二聚体沿c轴方向依次排列,每两个相邻二聚体间生成的氢键将它们连接成一个沿(001)方向延伸的锯齿形扭带.由c滑移面相关连的富马酸阴离子以水分子为桥,由O(W)-H…O氢键连成一条宽带,沿c轴方向延伸.这些富马酸根-水分子复合氢键宽带与尿素纽带交替平行排列,由此形成了一个平行于ac面的氢键层.四乙基铵离子层填充在b=1/4和b=3/4处的主体晶格的层间空隙处,构成“三明治”式夹层结构的包合物.     

Studies on organolanthanide complexes : LXIII. Synthesis, spectroscopic and X-ray crystallographic characterization of new early organolanthanide, organoyttrium hydride and organoholmium hydroxide complexes

Organolanthanide chloride complexes [(CH₃OCH₂CH₂C₅H₄)₂Ln(μ-Cl)]₂ (Ln = La, Pr, Ho and Y) react with excess NaH in THF at 45°C to give the dimeric hydride complexes [(CH₃OCH₂CH₂C₅H₄)₂Ln(μ-H)]₂, which have been characterized by IR, ¹H NMR, MS and XPS spectroscopy, elemental analyses and X-ray crystallography. [(CH₃OCH₂CH₂C₅H₄)₂Y(μ-H)]₂ crystallizes from THF/n-hexane at −30°C, in the triclinic space group P1 with a = 8.795(2) Å, b = 11.040(1) Å, c = 16.602(2) Å, = 93.73(1)°, β = 91.82(1)°, γ = 94.21(1)°, D_c = 1.393 gcm⁻³ for Z = 2 dimers. However, crystals of [(CH₃OCH₂CH₂C₅H₄)₂Ho(μ-OH)]₂ were obtained by recrystallization of holmium hydride in THF/n-hexane at −30°C, in the orthorhombic space group Pbca with a = 11.217(2) Å, b = 15.865(7) Å, c = 17.608(4) Å, D_c = 1.816 gcm⁻³ for Z = 4 dimers. In the complexes of yttrium and holmium, each Ln atom of the dimers is coordinated by two substituted cyclopentadienyl ligands, one oxygen atom and two hydrogen atoms (for the Y atom) or two hydroxyl groups (for the Ho atom) to form a distorted trigonal bipyramid if the C(η⁵)-bonded cyclopentadienyl is regarded as occupying a single polyhedral vertex.     

New temperature effect on tunneling reaction in hydrogen, alkane, and ethanol in the solid phase

Rate constants for the tunneling reaction (HD + D → h + D₂) in solid HD increase steeply with increasing temperature above 5 K, while they are almost constant below 4.2 K. The apparent activation energy for the tunneling reaction above 5 K is 95 K, which is consistent with the energy (91–112 K) for vacancy formation in solid hydrogen. The results above 5 K were explained by the model that the tunneling reaction was accelerated by a local motion of hydrogen molecules and hydrogen atoms. The model of the tunneling reaction assisted by the local motion of the reactans and products was applied to the temperature dependence of the proton-transfer tunneling reaction (C₆H₆⁻ + C₂H₅OH → C₆H₇ + C₂H₅O⁻) in solid ethanol, the tunneling elimination of H₂ molecule of H₂ molecule ((CH₃)₂ CHCH(CH₃)₂⁺ → (CH₃)₂ C = C(CH₃)₂⁺ + H₂) in solid 2,3-dimethylbutane, and the selective tunneling reaction of H atoms in solid neo-C₅H₁₂-alkane mixtures.     

Conformational stabilities of dimethylmethoxyphosphine and dimethyl(methylthio)phosphine from temperature dependent infrared spectra of rare gas solutions

Variable temperature (−55 to −150°C) studies of the infrared spectra (3500 to 400 cm⁻¹) of dimethylmethoxyphosphine, (CH₃)₂POCH₃ and dimethyl(methylthio)phosphine, (CH₃)₂PSCH₃ dissolved in liquid krypton and/or xenon have been recorded. From these data, the enthalpy differences have been determined to be 393±50 cm⁻¹ (4.71±0.60 kJ/mol), for (CH₃)₂POCH₃ with the near-cis conformer the more stable rotamer and 80±10cm⁻¹ (0.96±0.12 kJ/mol) for (CH₃)₂PSCH₃ with the cis conformer the more stable form. Complete vibrational assignments are presented for both molecules, which are consistent with the predicted frequencies obtained from the ab initio MP2/6-31G(d) calculations. The optimized geometries, conformational stabilities, harmonic force fields, infrared intensities, Raman activities, and depolarization ratios have been obtained from RHF/6-31G(d) and/or MP2/6-31G(d) ab initio calculations. These quantities are compared to the corresponding experimental quantities when appropriate as well as with some corresponding results for some similar molecules.     

Hydrothermal synthesis, crystal structure and characterization of [Zn(H2O)4]2 [H2As6V15O42(H2O)]·2H2O

The compound [Zn(H₂O)₄]₂[H₂As₆V₁₅O₄₂(H₂O)]·2H₂O (1) has been synthesized and characterized by elemental analysis, IR, ESR, magnetic measurement, third-order nonlinear property study and single crystal X-ray diffraction analysis. The compound 1 crystallizes in trigonal space group R3, a=b=12.0601(17) Å, c=33.970(7) Å, γ=120°, V=4278.8(12) Å³, Z=3 and R1(wR2)=0.0512 (0.1171). The crystal structure is constructed from [H₂As₆V₁₅O₄₂(H₂O)]⁴⁻ anions and [Zn(H₂O)₄]²⁺ cations linked through hydrogen bonds into a network. The [H₂As₆V₁₅O₄₂(H₂O)]⁶⁻ cluster consists of 15 VO₅ square pyramids linked by three As₂O₅ handle-like units.     

Second-sphere coordination in hexaamminecobalt(III) salt with organic sulphonate anion: Synthesis, characterisation and X-ray crystal structure of [Co(NH3)6](CH3SO3)3

Reaction of hexaamminecobalt(III) chloride with the silver salt of methanesulphonic acid in aqueous medium (1:3 molar ratio) forms hexaamminecobalt(III) methanesulphonate, [Co(NH₃)₆](CH₃SO₃)₃, in high yield. This cobalt(III) complex has been characterized by spectroscopic techniques (UV/visible, IR and NMR) and its solubility product determined. The X-ray crystal structure shows that the [Co(NH₃)₆]³⁺ cations interact at the second sphere by sharing edges with the anions, via N–H  O hydrogen bonds. The structure is related to that of [Co(NH₃)₆]Cl(CH₃SO₃)₂, but is modified to accommodate additional anions in place of Cl⁻.     

X-Ray, FTIR and quantum chemical studies of short and asymmetric hydrogen bonds in bis(2,6-dimethylpyridine-N-oxide) sulphate [2,6-(CH3)2C5H3N---OH]2[SO4]

Crystals of bis(2,6-dimethylpyridine-N-oxide) sulphate are monoclinic, space group P2₁/c, a = 14.098(2) Å, b = 7.855(1) Å, c = 15.203(3) Å, β = 104.84(1)°. The crystal structure has been refined to R = 0.0373 (2052 reflections). The disordered SO²⁻₄ anion accepts hydrogen bonds from two protonated 2,6-dimethylpyridine-N-oxides and two alternative conformations of the SO²⁻₄ group are distinguished. The occupancy factor of the predominant orientation is 0.63 and the O...O distances are 2.445(2) and 2.453(4) Å; in the second form (fraction, 0.37), these distances are 2.445(2) and 2.544(9) Å.

The PM3 and AM1 methods predict three minima for the title complex, whereas the SAM1 and BLYP/6-31G methods predict only one. All methods predict that molecular complex 3 is the most stable. The SAM1 geometry is very close to that of BLYP/6-31G.

The Fourier transform IR (FTIR) spectrum shows a very intense and broad (continuum) absorption within the 1600-400 cm⁻¹ region, typical of short hydrogen bonds. There is no absorption in the 3000-2000 cm⁻¹ region expected for the longer hydrogen bond (2.544(9) Å) in the less populated orientation. Isotope and solvent effects are discussed.     

Synthesis and molecular structure of the optically active organoaluminium dimer (S)-(—)-(S)-(—)- [(C6H5)CH(CH3)NHA1(CH3)2]2

Reaction of the optically active primary amine (S)-(—)--methylbenzylamine with trimethylaluminium in heptane affords the crystalline organoaluminium dimer (S)-(—)-(S)-(—)-[(C₆H₅)CH(CH₃)NHA1(CH₃)₂]₂. Isolated as large, colourless, extremely air-sensitive prismatic crystals, the title compound crystallizes in the orthorhombic space group P2₁2₁2₁ with unit cell parameters a = 8.406(3), b = 15.505(4), c = 17.547(5) Å, V = 2287 ų and p = 1.03 g cm⁻³ for Z = 4. Least-squares refinement based on 1477 observed reflections converged at R = 0.056, R_w = 0.058. Methane was eliminated during the course of the reaction due to cleavage of A1---C and N---H bonds resulting in an asymmetric A1₂N₂ fragment at the core of the organoaluminium dimer. The mean A1---C bond distance in the dimethylaluminium units is 1.930(8), while the mean A1---N bond distance is 1.950(5) Å. Specific rotation ([]_D²⁵ in CH₂C1₂)of the dimer is determined to be - 20.6°.     

Coordination geometry of chromium(VI) species. The first example of cis-bridging chromate ions in helically structured catena(μ-CrO4-O,O′)[Ni(HIm)3H2O]

Nickel(II) chromate complex with imidazole (HIm) was isolated from the [Ni²⁺–HIm–CrO₄²⁻] system in various experimental conditions, i.e. reagent molar ratios and nickel(II) salts. The catena(μ-CrO₄-O,O′)[Ni(HIm)₃H₂O] (1) crystallizes in monoclinic crystal system—space group P2₁/n with cell parameters: a=11.784(2), b=8.899(2), c=13.934(3) (Å), β=95.19(3) (°). The unit cell contains two independent helixes, left- and right-handed, stabilized by intrahelical and interhelical hydrogen bonds (HB) and π–π interactions. The cis coordination of the CrO₄²⁻ anions and the HB systems appeared to be the main determinants of the helical architecture. To the best of our knowledge the cis-chromate coordination was observed for the first time. The cis coordination causes the distortion of the nickel octahedron, which was analysed by 4 K single crystal electronic spectra with D_4h symmetry approximation (gaussian resolution and crystal field parameters). This symmetry was also confirmed with the polarised electronic spectra. The magnetic properties of the complex suggest the occurrence of weak intrachain antiferromagnetic interactions between the magnetic Ni^II center. The computational DFT studies of complex 1 assuming three possible isomers mer[(HIm)₃]–cis[(CrO₄²⁻)₂], mer–trans and fac–cis suggested that the main contribution to the stability of 1 might have interhelical and intrahelical hydrogen bonds.     

Microwave spectroscopic and ab initio studies of pyrolysis products of 2-nitrosopropene (syn form) and its pyrolysis mechanism

The pyrolysis products of CH₂=C(CH₃)---NO (syn form) have been determined by microwave spectroscopy. The pyrolysis products of CH₂=C(CH₃)---NO (syn form) and its ¹⁵N isotopic species were found to be CH₂=O, CH₃CN, and CH₃C¹⁵N. The produce of formaldehyde and methyl cyanide suggests that the C=C and N=O double bonds of CH₂=C(CH₃)---N=O (syn form) were broken. To explain the generation of the two molecules, a four-membered ring molecule (9) as an intermediate, is proposed. The four-membered ring molecule as an intermediate is also supported by ab initio MO calculation. Applying the pyrolysis mechanism obtained for 2-nitrosopropene (syn form) to that of 1,1,2-trichloronitrosoethane, one of its complicated pyrolysis mechanisms was explained. The rotational constants and geometrical parameters of two intermediates, 9 and CH₂=CCl---NO (13), were obtained by ab initio MO calculation (MP2/6-31G**) to predict their microwave spectra.     

单链2,7-取代萘刚性生色基双亲化合物的合成及其在稀溶液中的自组织

合成了系列单链含2,7-取代萘刚性生色基的双亲化合物C_nNaph(2,7)C₆N⁺(n=4,7,10,12,16),分别用透射电镜、¹HNMR和DSC观测了该系列双亲物在稀溶液中的聚集形态,研究了聚集体内的分子运动和凝胶态到液晶态的相变.结果表明,当尾链n≥7时,该系列化合物在稀溶液中自组织成双分子层排列的囊泡,当n=4时聚集体无确定形态.     

Infrared study of νOD modes in isotopically dilute (HDO) kieserite-type compounds MXO4·H2O (M=Mn, Co, Ni, Zn, and X=S, Se) with matrix-isolated M′ and X′O4 guest ions

The hydrogen bond strength in kieserite-type sulfate and selenate monohydrates has been studied by the method of double-matrix spectroscopy. The infrared spectra of isotopically dilute (matrix-isolated HDO molecules) kieserite-type compounds MXO₄·H₂O (M=Mn, Co, Ni, Zn, and X=S, Se) with matrix-isolated X′O₄²⁻ and M′²⁺ guest ions are presented and discussed in the region of the OD stretching modes. The OD frequencies indicate that the compounds under investigation form comparatively strong hydrogen bonds. The frequency shifts of the uncoupled OD stretching modes of the HDO molecules within the isostructural series and those influenced by the guest ions, and the strength of the hydrogen bonds formed, are discussed in terms of the respective O_wO distances, which hint at stronger hydrogen bonds for the sulfate series than for the selenate one by mistake, the larger hydrogen bond acceptor capability of SeO₄²⁻ ions compared to SO₄²⁻ ones, the different metal–water interactions and repulsion potentials of the lattice, and the reorientation of the water molecules caused by the guest ions. The shifts of the OD stretches of the ODOSe′O₃ bonds (Se′O₄²⁻ matrix isolated) to the lower wavenumbers as compared to the parent selenates are caused by the reorientation of the hydrate water molecules and strengthening the hydrogen bond to the stronger acceptor and vice versa. When smaller metal ions having smaller M–OH₂ bond lengths and, hence, stronger synergetic effect replace larger ones, the OD stretches are shifted to lower wavenumbers as compared to those due to the host M–O_wO bonds and vice versa.     

Synthesis, characterization and antitumor activity of some arylantimony triphenylgermanylpropionates and crystal structures of Ph3GeCH(Ph)CH2CO2SbPh4 and [Ph3GeCH2CH(CH3)CO2]2Sb(4-ClC6H4)3

A series of novel arylantimony(V) triphenylgermanylpropionates with the formula (Ph₃GeCHR¹CHR²CO₂)_nSbAr_(5−n) (R¹=H, Ph; R²=H, CH₃; n=1, 2) were synthesized and characterized by elemental analysis, IR, ¹H-NMR, ¹³C-NMR and mass spectroscopy. The crystal structures of Ph₃GeCH(Ph)CH₂CO₂SbPh₄ and [Ph₃GeCH₂CH(CH₃)CO₂]₂Sb(4-ClC₆H₄)₃ were determined by X-ray diffraction. The in vitro antitumor activities of some selected compounds against five cancer cells are reported.     

Structural and spectroscopic properties of Hexamethylenetetramine cobalt(II) complex: [Co(NCS)2(hmt)2(H2O)2][Co(NCS)2(H2O)4] (H2O)

Synthesis, structure, spectroscopy and thermal properties of complex [Co(NCS)₂(hmt)₂(H₂O)₂][Co(NCS)₂(H₂O)₄] (H₂O) (I), assembled by hexamethylenetetramine and octahedral Co(II) metal ions, are reported. Crystal data for I: F_w 387.34, a=9.020(8), b=12.887(9), c=7.95(1) Å, =96.73(4), β=115.36(5), γ=94.16(4)°, V=820(1) Å³, Z=2, space group=P−1, T=173 K, λ(Mo-K)=0.71070 Å, ρ_calc=1.718567 g cm⁻³, μ=17.44 cm⁻¹, R=0.088, R_w=0.148. An interesting two-dimensional network is assembled via hydrogen bonds through coordinated and free water molecules. The d–d transition energy levels of Co(II) ion are determined by UV–vis spectroscopy and calculated by ligand field theory. The calculated results agree well with experiment ones.