镍邻菲绕啉对DNA固定作用的原子力显微镜表征

原子力显微镜 ( AFM)自 1 986年发明以来得到了广泛的应用和发展 [1,2 ] ,成为众多研究领域中的强有力工具 ,并为其它的研究技术提供了良好的互补手段 .DNA是 AFM首次研究的生物样品之一 ,它使人类首次观察到 DNA分子的原始形貌 ,并实现了接近生理条件下的操作 ,使得随时监测生物大分子的生化反应过程成为现实 [3,4 ] .在 DNA的 AFM研究中 ,样品的制备是其关键 .以阳离子 (如 Mg2 + ,Ba2 + ,Mn2 +和 Ca2 +等 [5] )固定法较为常见 ,其操作简单 ,固定效果好 ,基底效应小 ,但也有一定的局限性 ,如存在限制性内切酶时 ,这些简单离子会…     

二价金属离子对鲑鱼精DNA热稳定性的影响

二价金属离子与 DNA之间的作用在 DNA复制、转录以及新陈代谢过程中起到重要的作用 ,因此越来越受到关注 [1,2 ] .L uck等 [3 ]指出 ,碱土金属与 DNA分子的磷酸基团发生作用使 DNA的热稳定性升高 ,而二价过渡金属离子主要是与碱基作用而使 DNA热稳定性降低 . Eichhorn等 [4 ] 用变温紫外光谱法研究了在 DNA磷酸根离子的浓度较小 (0～ 4.0 )时 ,多种二价金属离子对小牛胸腺 DNA热稳定性的影响 ,发现 Mg2 + 及过渡金属离子 Mn2 + ,Co2 + 和 Ni2 + 都有利于 DNA的稳定 .最近 ,Duguid等 [5]用差示扫描量热法 (DSC)研究了在 c(M2 +…     

From encapsulation to polypseudorotaxane: unusual anion networks driven by predesigned metal bis(terpyridine) complex cations

Solvothermal reactions of CuSCN, metal (Mn2+, Fe2+, Co2+, Ni2+, Cu2+) sulfate, and terpyridine (2,2':6',2' '-terpyridine or 4'-p-tolyl-2,2':6',2' '-terpyridine) in the presence of triphenylphosphine yielded a series of hybrid coordination compounds, in which in situ formed metal bis(terpyridine) complex cations are encapsulated by a 3D anionic network or entangled by 2D heartlike networks, forming encapsulation or polypseudorotaxane supramolecules. The complex cations play a role as template to direct the fabrication of the structures.     

Stabilization of tetrameric metavanadate ion by tris(1,10-phenanthroline)cobalt(III): Synthesis, spectroscopic and X-ray structural study of [Co(phen)(3)](3)(V(4)O(12))(2)Cl·27H(2)O

A new complex salt of composition [Co(phen)(3)](3)(V(4)O(12))(2)Cl·27H(2)O (phen = 1,10-phenanthroline and [V(4)O(12)](4-) = tetrameric dodecaoxotetravanadate ion) was synthesized by reacting appropriate salts in aqueous medium. The complex salt has been characterized by elemental analyses, thermogravimetric analysis (TGA), cyclic voltammetry (CV), FT-IR and UV/Vis spectroscopies, solubility product and conductance measurements. Single crystal X-ray structure determination revealed ionic structure consisting of three complex cations, [Co(phen)(3)](3+), two [V(4)O(12)](4-) anions, one chloride and twenty seven lattice waters. Detailed structural and spectroscopic analyses of [Co(phen)(3)](3)(V(4)O(12))(2)Cl·27H(2)O show that the large anion is stabilized by the large cationic metal complex as there is preferred shape compatibility that leads to a large number of lattice stabilizing non-covalent interactions.     

Nonstoichiometric spinel ferrites obtained from alpha-NaFeO2 via molten media reactions

Different solid/liquid "exchange" reactions involving divalent cations, protons, or ammonium ions have been performed at low/moderate temperatures (between 80 and 500 degrees C) on alpha-NaFeO2 dipped in molten salts (or acid) media. Several ferrites have been obtained which are nonstoichiometric with partially inverse spinel structures. When sodium is replaced by divalent cations (Mg2+, Co2+, Ni2+, and Zn2+), the obtained ferrites are hyperstoichiometric (cation/oxygen ratio higher than 3/4) whereas proton or ammonium reactions result in hypostoichiometric materials (cation/oxygen lower than 3/4). All these ferrites present a platelet-like morphology and show ferrimagnetic, soft magnet behavior.     

Interaction of rac-[M(diimine)3]2+ (M=Co, Ni) complexes with CT DNA: role of 5,6-dmp ligand on DNA binding and cleavage and cytotoxicity

The complexes [Co(diimine)(3)](ClO(4))(2)1-3 and [Ni(diimine)(3)](ClO(4))(2)4-6, where diimine = 1,10-phenanthroline (phen) (1,4), 5,6-dimethyl-1,10-phenanthroline (5,6-dmp) (2,5) and dipyrido[3,2-d:2',3'-f]quinoxaline (dpq) (3,6), have been isolated, characterized and their interaction with CT DNA studied by using a host of physical methods. The X-ray crystal structures of rac-[Co(5,6-dmp)(3)](ClO(4))(2)2 and rac-[Ni(5,6-dmp)(3)](ClO(4))(2)5 have been determined and the isostructural and also isomorphous complex cations possess distorted octahedral coordination geometries. The absorption spectral titrations of the complexes with DNA reveal that the CT DNA binding affinity (K(b)) of the complexes varies as 3>2>1; 6>5>4. The Ni(II) complexes display DNA binding stronger than the corresponding Co(II) analogues, which is expected of their bigger sizes. The higher DNA binding affinity of 3 and 6 is due to the involvement in partial insertion of the extended phen ring in between the DNA base pairs. In contrast, 2 and 5 interact with DNA in the major groove through hydrophobic forces involving the methyl groups on the 5,6 positions of phen ring. An enhancement in relative viscosities of DNA upon binding to 1-6 is consistent with the DNA binding affinities. The CD spectral studies show only an induced CD band on the characteristic positive band of CT DNA for both the phen (1,4) complexes. In contrast, the 5,6-dmp (2,5) and dpq (3,6) complexes bound to CT DNA exhibit biphasic CD signals in place of the positive CD band and the negative helicity band disappears. This reveals that the complexes bind to DNA enantiopreferentially and effect changes in secondary structure of DNA. The CV and DPV responses indicate that the DNA-bound dpq complexes are stabilized in the lower oxidation state of Co(II) more than in the Co(III) oxidation state. The prominent DNA cleavage abilities of 1-3 observed in the presence of H(2)O(2) (200 μM) follows the order 2>1>3 with efficiencies of more than 90% even at 10 μM complex concentration. Interestingly, Ni(II) complexes 4-6 exhibit higher cytotoxicity (IC(50): 1, 28.0; 2, 15.0; 3, 20.0; 4, 8.0; 5, 2.0; 6, 2.0 μM at 48 h; IC(50): 1, 30.0; 2, 20.0; 3, 25.0; 4, 10.0; 5, 3.0; 6, 3.0 μM at 24 h) against human breast cancer (MCF 7) cell lines than the Co(II) complexes 1-3 as well as cisplatin in spite of their inability to cleave DNA. Also, the 5,6-dmp complex 5 shows cytotoxicity higher than the dpq complex 6 at 24 h incubation time and both 5 and 6 display apoptotic and necrotic modes of cell death.     

Anion-cation charge-transfer properties and spectral studies of [M(phen)3][Cd4(SPh)10] (M = Ru, Fe, and Ni)

Three anion-cation compounds 1-3 with formula [M(phen)(3)][Cd(4)(SPh)(10)]·Sol (M = Ru(2+), Fe(2+), and Ni(2+), Sol = MeCN and H(2)O) have been synthesized and characterized by single-crystal analysis. Both the cations and anion are well-known ions, but the properties of the co-assembled compounds are interesting. Molecular structures and charge-transfer between the cations and anions in crystal and even in solution are discussed. These compounds are isomorphous and short inter-ion interactions are found in these crystals, such as π···π stacking and C-H···π contacts. Both spectroscopic and theoretical calculated results indicate that there is anion-cation charge-transfer (ACCT) between the Ru-phen complex dye and the Cd-SPh cluster, which plays an important role in their photophysical properties. The intensity of the fluorescent emission of the [Ru(phen)(3)](2+) is enhanced when the cation interacts with the [Cd(4)(SPh)(10)](2-) anion. The mechanism for the enhancement of photoluminescence has been proposed.     

Effect of divalent metal ions on DNA studied by capillary electrophoresis

Divalent metal ions, such as Zn(2+), Co(2+), and Ni(2+), are capable of incorporating into DNA under certain conditions to form complexes termed M-DNA. To better understand the effects of these cations on DNA we used capillary electrophoresis (CE). The presence of these metal ions in a typical genotyping buffer led to broad peaks with low fluorescence intensities. In addition, some of the metal-complexed DNA molecules had different electrophoretic mobilities than their normal DNA counterparts. It is likely that the mobility shifts observed in the electropherograms of these affected fragments are due to the divalent cations causing structural changes in the single-stranded DNA. However, as can be seen from the resulting peak shapes, the structure, charge, and/or mass changes due to metal binding are not conserved among all of the DNA fragments. The extent of both peak-broadening and mobility shifts were found to be dependent on the metal cation and its concentration, the length of time that the DNA sample existed in formamide prior to injection into the capillary, and also the fragment size and sequence. These results suggest that the presence of metal ions might be responsible for the poor CE performance that occurs when genotyping certain kinds of DNA samples.     

Preferential DNA cleavage under anaerobic conditions by a DNA-binding ruthenium dimer

In the absence of dioxygen, the cationic complex [(phen)2Ru(tatpp)Ru(phen)2]4+ (P4+) undergoes in situ reduction by glutathione (GSH) to form a species that induces DNA cleavage. Exposure to air strongly attenuates the cleavage activity, even in the presence of a large excess of reducing agent (e.g., 40 equiv of GSH per P4+), suggesting that the complex may be useful in targeting cells with a low-oxygen microenvironment (hypoxia) for destruction via DNA cleavage. The active species is identified as the doubly reduced, doubly protonated complex H2P4+, and a carbon-based radical species is implicated in the cleavage action. We postulate that the dioxygen concentration regulates the degree to which the carbon radical forms and thus regulates the DNA cleavage activity.     

碱金属离子对Fe(phen)3/Y催化氧化性能的影响

采用自由配体法,将铁邻菲啰啉(Fe(phen)3)配合物封装在含有不同碱金属阳离子的Y型分子筛中,制备了系列Fe(phen)3/M-Y(M=Li+,Na+,K+和Cs+)催化剂.采用X射线衍射、红外光谱、紫外-可见光谱、热重-差热分析、电感耦合等离子原子发射光谱、N2吸附-脱附以及催化氧化反应考察了碱金属离子对Fe(phen)3/M-Y催化剂物化性质和催化氧化性能的影响.结果表明,交换有不同碱金属离子的Y型沸石中Fe(phen)3的封装量不同,而且Fe(phen)3在Y型沸石中的热稳定性随着碱金属离子半径的增加有所降低,其中Fe(phen)3/Li+-Y具有最高的配合物封装量和热稳定性能.在环己烷或苯乙烯氧化反应中,在较低的反应温度下,Fe(phen)3/K+-Y表现出最高的催化活性,而在较高的反应温度下,Fe(phen)3/Cs+-Y的催化活性最高,碱金属离子对Fe(phen)3/M-Y催化氧化性能的影响是电子效应、空间限制作用和扩散效应的综合结果.     

Label-free emission assay of mercuric ions using DNA duplexes of poly(dT)

In this study, an assay to quantify the presence of mercuric ions and methyl mercury by double-stranded DNA containing a poly(dT) sequence was developed using a light switch compound, Ru(phen)(2)(dppz)(2+) (1), which is known to intercalate into double-stranded DNA. Upon treatment with mercuric ions, the metal-to-ligand charge transfer (MLCT) emission derived from the intercalation of 1 was reduced due to the formation of DNA duplexes containing T-Hg(2+)-T base pairs by the dehybridization of poly(dT)-poly(dA) duplexes at room temperature. As the concentration of Hg(2+) was increased, the emission of 1 gradually decreased. This label-free method had a detection limit of 5 nM. Other metal ions, such as K(+), Ag(+), Ca(2+), Mg(2+), Zn(2+), Mn(2+), Co(2+), Ni(2+), Cu(2+), Cd(2+), Cr(3+), Fe(3+), had no significant effect on reducing emission. This emission method can differentiate matched and mismatched poly(dT) sequences based on the dehybridization rate of dsDNA and the rate decreased in the order of T(10)C·A(11)～ T(10)A·A(11) > T(10)G·A(11) > T(11)·A(11).     

Near monodisperse TiO2 nanoparticles and nanorods

Highly crystalline, near monodisperse TiO2 nanoparticles, nanorods and their metal-ion-doped (Sn4+, Fe3+, Co2+, and Ni2+, etc.) derivatives have been prepared by well-controlled solvothermal reactions. Through adjusting the reaction parameters, such as reaction temperature, duration, and concentration of the reactants, the size, shape, and dispersibility of the products can be controlled. A possible reaction mechanism can be proposed based on experimental evidence.     

Solvothermal synthesis and characterization of polyselenidoarsenate salts of transition metal complex cations

The polyselenidoarsenates [Fe(phen)(3)][As(2)Se(6)] (1), [Zn(phen)(dien)][As(2)Se(6)]·2phen (2), [{Mn(phen)(2)}(2)(μ-η(2),η(2)-AsSe(4))](2)[As(2)Se(6)]·H(2)O (3), and [Ni(phen)(3)][As(2)Se(2)(μ-Se(3))(μ-Se(5))] (4) (dien = diethylenetriamine and phen = 1,10-phenanthroline) were prepared by the reaction of As(2)O(3), Se, dien, and phen in the presence of transition metals in a methanol solvent under solvothermal conditions. Compounds 1-3 consist of [As(2)Se(6)](2-) anions with [Fe(phen)(3)](2+), [Zn(phen)(dien)](2+), and [{Mn(phen)(2)}(2)(μ-η(2),η(2)-AsSe(4))](+) complex counter cations, respectively. The [As(2)Se(6)](2-) anion is formed from two As(III)Se(3) trigonal pyramids linked through two Se-Se bonds. Compound 3 is the first example of a mixed-valent selenidoarsenate(III,V) and exhibits the coexistence of As(III)Se(3) trigonal pyramidal and As(V)Se(4) tetrahedral units. Compound 4 is composed of a helical chain of [As(2)Se(2)(μ-Se(3))(μ-Se(5))(2-)](∞) and octahedral [Ni(phen)(3)](2+) cations. The [As(2)Se(2)(μ-Se(3))(μ-Se(5))(2-)](∞) chain is constructed from AsSe(+) units alternatively linked by μ-Se(3)(2-) and μ-Se(5)(2-) bridging ligands. When the structures of compounds 1-4 are compared, the transition metal ions show different structural directing effects during the synthesis of arsenic polyselenides in methanol. Compounds 1, 2, 3, and 4 exhibit semiconducting properties with band gaps of 1.88, 2.29, 1.82, and 2.01 eV, respectively.     

浸渍硅胶薄层色谱板分离钴和镍及数字图像分析法定量(英文)

Thin layer chromatography(TLC) of cobalt and nickel has been performed on silica gel layers induced with alkali mediated cellulose extract.A novel combination of 10% aqueous solutions of Tween-20 and potassium thiocyanate in 1∶1(v/v) was identified as the best mobile phase for the selective separation of Co2+from Ni2+on the impregnated Silica Gel G layers.The chromatographic characteristics of the cations were studied and the limits of detection as well as the limits of quantification for Co2+and Ni2+were determined.The quantitative estimation of the cations was achieved from the digital image analysis of respective chromatograms.The proposed quantitative method was successfully applied with 0-0.50% error for the determination of Co2+from Ni2+in spiked samples of bauxite,soil and rock containing common cations such as Al3+,Fe2+,Ti4+,Zn2+,Mn2+,Cu2+,Cr6+,Mg2+,etc.under the optimized chromatographic conditions.     

Interactions of metal ions with monoaza crown ethers A15C5 and A18C6 carrying dansyl fluorophore as pendant in acetonitrile solution

The influence of metal cations Li(+), Na(+), K(+), Cs(+), Mg(2+), Ca(2+), Sr(2+), Ba(2+), Co(2+), Ni(2+), Cu(2+), Zn(2+), Pb(2+) and Al(3+) on the spectroscopic properties of the dansyl (1-dimethylaminonaphthalene-5-sulfonyl) group covalently linked to monoaza crown ethers 1-aza-15-crown-5 (1,4,7,10,-tetraoxa-13-azacyclopentadecane) (A15C5) and 1-aza-crown-6 (1,4,7,10,13-pentaoxa-16-azacyclooctadecane) (A18C6) was investigated by means of absorption and emission spectrophotometry. Interaction of the alkali metal ions with both fluoroionophores is weak, while alkaline earth metal ions interact strongly causing 50 and 85% quenching of dansyl fluorescence of N-(5-dimethylamine-1-naphthalenesulfonylo)-1,4,7,10,-tetraoxa-13-azacyclopentadecane (A15C5-Dns) and N-(5-dimethylamine-1-naphthalenesulfonylo)-1,4,7,10,13-pentaoxa-16-azacyclooctadecane (A18C6-Dns), respectively. The Cu(2+), Pb(2+) and Al(3+) cations interact very strongly with dansyl chromophore, causing a major change in absorption spectrum of the chromophore and forming non-fluorescent complexes. The Co(2+), Ni(2+), Zn(2+), Mg(2+) cations interact moderately with both fluoroionophores causing quenching of dansyl fluorescence by several percent only.     

Ion-chromatographic separation of metal cations in the presence of α-hydroxyisobutyric acid

Separations of metal cations on a column packed with the strongly acidic cation exchanger Separon SGX CX were investigated in the presence of alpha-hydroxyisobutyric acid (HIBA) in the mobile phase. A retention model based on the general theory of side equilibria was elaborated and relations describing dependences of capacity factors of analytes on the compositon of the mobile phase were derived. Effects of HIBA concentration and pH of the mobile phase on the analyte retention were studied in detail. Stability constants of divalent metal cations (Cd(2+), Co(2+), Mn(2+), Ni(2+) and Zn(2+)) with HIBA were calculated from the experimental dependences of the reciprocal values of capacity factors on the ligand concentration.     

Isotherm sorption of Cd2+, Co2+, and Ni2+ onto high-yield kraft fibers

The sorption capacity of high-yield kraft fibers for Cd2+, Co2+, and Ni2+ increased with pH and concentration of the cations in the liquid phase. Within the concentration range for the experiments, which was less than 2 mM, the experimental results fitted the Langmuir, Freundlich, and Sips models with regression coefficient greater than 0.97. Of the three cations investigated, Ni2+ had the highest sorption affinity, followed by Cd2+ and Co2+. The effect of the hydrated radius on the sorption affinity was discussed. Thermodynamically, the sorption was spontaneous and exothermic in the temperature range 283-308 K.     

A novel fluorescent sensor for metal cations and protons based of bis-1,8-naphthalimide

A newly synthesized bis-1,8-naphthalimide aimed to increase its fluorescence intensity in the presence of protons or metal cations has been investigated. Its spectral photophysical characteristics in acetonitrile and chloroform solutions are described. The influence of metal cations (Zn(2+), Ni(2+), Ce(3+), Co(2+), Cu(2+) and Ag(+)) and protons on the fluorescence intensity has been investigate with regard to obtain fluorescence sensors for this ions in the environment.     

Chiral separations of transition metal complexes using capillary zone electrophoresis.

Several buffer additives that may facilitate chiral separation for optically active transition metal (TM) systems are investigated using capillary zone electrophoresis. The TM complexes evaluated exhibit considerable heterogeneity with respect to total complex charge (0 to 4+), ligand type, and identity of the central metal including Ru2+, Ni2+, Cr3+, and Co3+, threo-D[+]-Isocitrate, potassium antimonyl-d-tartrate and dibenzoyl-L-tartrate are identified as the most efficient chiral selectors. Interestingly, TM complexes exhibiting a (3+) total complex charge exhibit a reversal of enantiomer elution order versus all other complexes when separated using the tartrate additives. Operating parameters including pH, temperature, and capillary length are discussed, and chiral separations of complex mixtures are demonstrated.     

Effects of bridge ions, DNA species, and developing temperature on flat-lying DNA monolayers

Recently, we have successfully constructed flat-lying DNA monolayers on a mica surface (J. Phys. Chem. B 2006, 110, 10792-10798). In this work, the effects of various factors including bridge ions, DNA species, and developing temperature on the configuration of DNA monolayers have been investigated by atomic force microscopy (AFM) in detail. AFM results show that the species of bridge ions and developing temperature play a crucial role during the formation process. For example, the divalent cation Zn2+ resulted in many DNA chains stuck side by side in the monolayers due to the strong interactions between it and DNA's bases or the mica surface. Most DNA chain's conglutinations disappeared when the developing temperature was higher than 40 degrees C. Cd2+ and Ca2+ produced more compact DNA monolayers with some obvious aggregations, especially for the DNA monolayers constructed by using Ca2+ as the bridge ion. Co2+ produced well-ordered, flat-lying DNA monolayers similar to that of Mg2+. Furthermore, it was found that the flat-lying DNA monolayers could still form on a mica surface when plasmid DNA pBR 322 and linear DNA pBR 322/Pst I were used as the DNA source. Whereas, it was hard to form DNA monolayers on a (3-aminopropyl)triethoxysilane-mica surface because the strong interactions between DNA and substrate prevented the lateral movement of DNA molecules. These results suggested that the appropriate interactions between divalent cations and DNA or mica surface were important for the formation of flat-lying DNA monolayers. The obtained information is a necessary supplement to our previous studies on the formation kinetics of such monolayers and may be useful for practical application of the monolayers and further theoretical studies.