Prediction of chromatographic parameters for some anilines by molecular connectivity

Summary The possible relation existing between R_F values obtained by thin-layer chromatography for a group of anilines with connectivity indices proposed by Kier and Hall has been studied. Using multivariable regression the corresponding connectivity functions, selected for their respective correlation coefficients, standard deviations, Snedecor's F and Student's t were obtained. Regression analysis of the connectivity functions gives a correct prediction of the experimental elution sequence for this group of substances on silica gel stationary phases and various mobile phases of different polarity. The corresponding random and stability studies of the different prediction models selected were carried out, showing good stability and null randomness in all cases.     

Prediction of chromatographic parameters for some anilines by molecular connectivity

Summary The possible relation existing between R_F values obtained by thin-layer chromatography for a group of anilines with connectivity indices proposed by Kier and Hall has been studied. Using multivariable regression the corresponding connectivity functions, selected for their respective correlation coefficients, standard deviations, Snedecor’s F and Student’s t were obtained. Regression analysis of the connectivity functions gives a correct prediction of the experimental elution sequence for this group of substances on silica gel stationary phases and various mobile phases of different polarity. The corresponding random and stability studies of the different prediction models selected were carried out, showing good stability and null randomness in all cases.     

Quasi-column chromatography of barbituric acid derivatives II. Separation on Non-polar adsorbents using binary water-organic solvent mixtures as the mobile phase

Summary Twenty barbituric acid derivatives having four different types of substitution were separated in TLC-S chambers. Using non-polar adsorbents (silanized silica gel or silica gel coated with paraffin oil) and binary water-organic solvent mixtures as the mobile phase. Linear relationships between R_M and the concentration of the organic solvent were observed for the majority of the investigated compounds. The non-polar absorbents ensure a better separation than untreated silica gel especially for the therapeutically useful C₅ disubstituted barbiturates. The results can be used for the optimization of the systems for the chromatography of barbiturates. The R_f values were correlated with the number of carbon atoms of the substitutions, molecular connectivity and a parameter associated with the molecular volume. The best correlations were obtained for this last parameter.     

Benchmarking and validating algorithms that estimate p<Emphasis Type="Italic">K</Emphasis><Subscript>a</Subscript> values of drugs based on their molecular structures

The REGDIA regression diagnostics algorithm in S-Plus is introduced in order to examine the accuracy of pK _a predictions made with four updated programs: PALLAS, MARVIN, ACD/pKa and SPARC. This report reviews the current status of computational tools for predicting the pK _a values of organic drug-like compounds. Outlier predicted pK _a values correspond to molecules that are poorly characterized by the pK _a prediction program concerned. The statistical detection of outliers can fail because of masking and swamping effects. The Williams graph was selected to give the most reliable detection of outliers. Six statistical characteristics (F _exp, R ², , MEP, AIC, and s(e) in pK _a units) of the results obtained when four selected pK _a prediction algorithms were applied to three datasets were examined. The highest values of F _exp, R ², , the lowest values of MEP and s(e), and the most negative AIC were found using the ACD/pK _a algorithm for pK _a prediction, so this algorithm achieves the best predictive power and the most accurate results. The proposed accuracy test performed by the REGDIA program can also be applied to test the accuracy of other predicted values, such as log P, log D, aqueous solubility or certain physicochemical properties of drug molecules.     

The lipophilicity of parabens estimated on reverse phases chemically bonded and oil‐impregnated plates and calculated using different computation methods

The chromatographic behaviour of the parabens has been investigated on RP‐18F_254S, RP‐18WF_254S, CNF_254S, Diol F_254s and silica gel 60F₂₅₄ plates impregnated with different oils (paraffin, olive, sunflower and corn) using methanol–water mixtures in different volume proportions as mobile phases, the regression determination coefficients being excellent (higher than 0.98 for the majority of compounds). Moreover, highly significant correlations were obtained between different experimental indices of lipophilicity (R_M0, b and scores corresponding to the first principal component (PC1)) and computed log P values. All types of stationary phases investigated appear to be highly suited for estimating the lipophilicity of the parabens.     

QSAR based modeling on a series of α-hydroxy amides as a novel class of bradykinin B1 selective antagonists

G-protein coupled receptors like Bradykinin (BK) B₁ represent a potential treatment route for chronic pain and inflammation. Quantitative structure activity relationship has been performed on a series of α-hydroxy amides as a novel class of bradykinin B₁ selective antagonists, using different physicochemical parameters along with appropriate indicator variables. It has been found that physicochemical parameters such as connectivity indices ³χ, ⁴χ and ⁵χ, molecular weight, molar refractivity, density along with indicator variables are significantly correlated with activity. In this paper best results were obtained by using multiple regression analysis. Different models were generated with high values of R² and low values of PRESS/SSY ratio. The significant equations were statistically tested by using leave one out (LOO) technique and cross validation methods.     

Fluoroalkyl end‐capped oligomers possessing nonflammable characteristic in calcium carbonate nanocomposites

Calcium chloride reacted with sodium carbonate in the presence of a variety of fluoroalkyl end‐capped oligomers such as fluoroalkyl end‐capped acrylic acid oligomer (R_F‐[ACA]_n‐R_F), 2‐methacryloyloxyethanesulfonic acid oligomer (R_F‐[MES]_n‐R_F), N,N‐dimethylacrylamide oligomer (R_F‐[DMAA]_n‐R_F) and acryloylmorpholine oligomer (R_F‐[ACMO]_n‐R_F) to afford the corresponding fluorinated oligomers/calcium carbonate composites. Each fluorinated oligomer/calcium carbonate composite thus obtained is nanometer size‐controlled very fine particles (25–114 nm) possessing a good dispersibility and stability in a variety of solvents including water. Thermal stability of these fluorinated calcium carbonate nanocomposites was studied by thermogravimetic analyses measurements. Fluorinated oligomes, in which the theoretical oligomer content in the composites is 19%, were able to give no weight loss corresponding to the content of oligomer in each case even after calcination at 800 °C. On the other hand, a slight weight loss corresponding to the contents of oligomers in the composites after calcination at 800 °C was observed in R_F‐(MES)_n‐R_F/, R_F‐(DMAA)_n‐R_F/ and R_F‐(ACMO)_n‐R_F/calcium carbonate nanocomposites, in which the theoretical contents of the oligomers were 36–53%, although R_F‐(ACA)_n‐R_F/calcium carbonate nanocomposites gave a clear weight loss corresponding to the contents of oligomer under similar conditions. Fluorinated oligomers/calcium carbonate nanocomposites possessing no weight loss at 800 °C were applied to the surface modification of poly(methyl methacrylate) (PMMA) to exhibit a good oleophobicity imparted by fluorines on the surfaces. Interestingly, these fluorinated calcium carbonate nanocomposites after calcination at 800 °C were found to exhibit the similar oleophobic characteristic on the modified PMMA surfaces as well as that of the nanocomposites before calcination. Copyright © 2013 John Wiley & Sons, Ltd.     

Chromatographic descriptors in QSAR study of barbiturates

Barbiturate derivatives were evaluated for their parameters of biological activity by applying linear regression and two multivariate methods (Cluster analysis and Principal component analysis). The lipophilicity of the studied barbiturates was determined on the modified carriers C18 in mixtures of water and four organic modifiers separately (methanol, n-propanol, acetone and tetrahydrofuran) by performing reversed phase thin layer chromatography and by applying relevant software packages. Chromatographic and computational lipophilicity of the examined barbiturates was correlated with the selected pharmacokinetic and toxicological predictors and good relationships were obtained. More concrete results were obtained by multivariate methods which showed that the polarity of the substituent has the greatest influence, and its electronic effects to a lesser extent on the tested parameters of the barbiturate derivatives. Results obtained by multivariate methods also suggest that the chromatographic retention constant, R_M⁰, shows a greater resemblance to the parameters of lipophilicity. The chromatographic parameter m, exhibits better agreement with the toxicity parameters.     

Lipophilicity of Some Preservatives Estimated by RP-TLC Using Stationary Phases with Different Polarity

Lipophilcity of some preservatives was determined by reversed phase high performance thin layer chromatography (RP-HPTLC) using methanol–water mixtures in different volume proportions as mobile phase on three stationary phases of different polarity: RP-18F_254s, RP-18WF_254s and CNF_254s plates. The R _M values decreased linearly with increasing methanol concentration in the mobile phase in all cases. The regression determination coefficients obtained for all stationary phases were excellent (higher than 0.98 in most cases). The chromatographic behavior of the preservatives on the RP-HPTLC plates used in this study is similar and in a very good agreement with their polarity. Good chromatographic regularities found for retention factors and by applying principal component analysis for all three types of stationary phases indicate that the same lipophilic interactions are dominants in all cases. The relationships between different RP-HPTLC retention parameters (R _M0 , b, scores of R _F -PC1/R _F and scores of R _M -PC1/R _M ) and various calculated log P values of the same preservatives show highly significant correlations for all types of stationary phases.     

Zinc Silicate as a New Adsorbent for Paper Chromatographic Separation of Phenols

Abstract

A new adsorbent zinc silicate has been used for the paper chromatographic separations of different phenols. R_F values have been determined and compared with those obtained on plain papers. A new term R_i has been calculated for various phenols. The dependance of R_i and R_F on various factors have also been studied and discussed.     

A few remarks on the simulation and use of crystal field energy level schemes of the rare earth ions

The usefulness of the simulation of the energy level schemes of the trivalent rare earth (R³⁺) ions in the prediction of the properties of the rare earth compounds is demonstrated for a few selected cases emphasizing the connection between different spectroscopic and magnetic properties of the R³⁺ ions. The importance of the calculated energy level schemes in the UV-VUV range in interpreting complicated spectra and designing new phosphors by energy transfer and quantum cutting is described. In the absence of direct measurements, the calculated energy level values can be very useful. The possibilities to interpret the magnetic properties of the R³⁺ (and R²⁺) ions are described by using the wave functions of the energy levels obtained from the energy level simulations. As a fine example, it is shown how the amount of an Eu²⁺ impurity can be obtained from the calculation of the paramagnetic susceptibility as a function of temperature. The problems involved in the simulation of the ⁷F_J crystal field energy level scheme of the Eu³⁺ ion are highlighted by using a comparison between the extensive literature data and calculated level schemes.     

Superstructure and stacking faults in hydrothermal-grown KBe2BO3F2 crystals

The structure of the hydrothermal-grown nonlinear optical crystal KBe₂BO₃F₂ was investigated. A new structure of the R3?c space group with cell parameters of a=4.422(1) Å and c=37.524(3) Å was obtained by powder X-ray diffraction and Rietveld refinement. The new structure is a 1×1×2 superstructure of the previously reported R32 structure with a different stacking sequence of (Be₂BO₃F₂)_∞ layers along the c axis. The relationship between the refined structure and the experimental results is discussed. A stacking fault mechanism is proposed for the formation of the superstructure as well as the nonuniformity of the hydrothermal-grown KBBF crystals.     

Preparation of a variety of fluoroalkyl end‐capped N‐(1,1‐dimethyl‐3‐oxobutyl)acrylamide oligomer/silica nanocomposites possessing no weight loss characteristic at 800°C

A variety of fluoroalkyl end‐capped N‐(1,1‐dimethyl‐3‐oxobutyl)acrylamide oligomer [R_F‐(DOBAA)_n‐ R_F]/silica nanocomposites, in which the oligomer contents are 18–96%, were prepared by reactions of the corresponding fluorinated oligomer with tetraethoxysilane and silica nanoparticles under alkaline conditions. Each fluorinated oligomer/silica composite thus obtained is nanometer size‐controlled very fine particles (22–68 nm) possessing a good dispersibility and stability in a variety of solvents including water. Interestingly, the weight loss of R_F‐(DOBAA)_n‐R_F/silica nanocomposites, in which the oligomer contents are 18–72%, were not observed at all even at 800°C, as well as the original silica nanoparticles, although the corresponding sub‐micrometer size‐controlled R_F‐ (DOBAA)_n‐R_F/silica composites (particle size: 359 nm) decomposed completely at 800°C to afford the weight loss in proportion to the content of R_F‐(DOBAA)_n‐R_F oligomer in composites. On the other hand, a slight weight loss of R_F‐(DOBAA)_n‐R_F/silica nanocomposites, in which the oligomer contents are 75–94%, was observed at 800°C compared to that of the original silica nanoparticles. Copyright © 2008 John Wiley & Sons, Ltd.     

Paper chromatography of metal complexes : Realtionship between the rf and the stabiliiy of metal complexes

It is shown that the R_F values can be related to the stability constants of the corresponding metalligand coördination compounds. The relationship has been applied to prove graphically the stoichiometric identity of two or more complexes formed by paper chromatrography in a given system.     

The first synthesis of 8-aza-2-polyfluoroalkylchromones

The condensation of 3-acetyl-4,6-dimethyl-2-pyridone with R_FCO₂Et in the presence of LiH in dioxane affords corresponding R_F-containing β-diketones, whose dehydration under the action of conc. H₂SO₄ gives 8-aza-5,7-dimethyl-2-polyfluoroalkylchromones.     

Self-assembly behavior of fluorocarbon-end-capped poly(glycerol methacrylate) in aqueous solution

Well-defined perfluoroalkyl-terminated poly(glycerol methacrylate) (R _F-PGMA) semitelechelics are prepared by atom transfer radical polymerization and copper(I)-catalyzed alkyne–azide cycloaddition reaction. R _F-PGMA has a similar architecture as the well-studied perfluorinated poly(ethylene oxide) (R _F-PEO) semitelechelics but bears two hydroxyl groups on each glycerol methacrylate unit. Because of the strong hydrophobic interaction of the perfluoroalkyl group, R _F-PGMA semitelechelics self-associate to form core–corona spherical micelles in water above the critical micellization concentration (cmc) which depends on poly(glycerol methacrylate) (PGMA) content and temperature. For comparison, the R _F-PEO semitelechelics with the same perfluoroalkyl terminal group as R _F-PGMA are also prepared. The cmc values of R _F-PGMA semitelechelics are found to increase with increasing temperature in water, which is opposite to the tendency of R _F-PEO semitelechelics. According to the thermodynamic studies, the micellization process of R _F-PGMA in aqueous solution is driven by both a negative enthalpy and an increase of entropy, whereas the micellization of R _F-PEO is an entropy-driven process exhibiting a positive micellization enthalpy. This striking different behavior originates from intra-/intermolecular hydrogen bonds between the hydroxyl groups of the PGMA chains. These strong inter- and intramolecular hydrogen bonds between PGMA segments lead to a self-aggregation of R _F-PGMA evident in temperature-dependent ¹H and ¹⁹F NMR spectroscopy and dynamic light scattering measurements.     

High-temperature and photochemical syntheses of C60 and C70 fullerene derivatives with linear perfluoroalkyl chains

New experimental results on perfluoroalkylation of C₆₀ and C₇₀ with the use of R_fI (R_f = CF₃, C₂F₅, n-C₃F₇, n-C₄F₉, and n-C₆F₁₃), along with a critical overview of the existing synthetic methods, are presented. For the selected new fullerene (R_f)_n compounds we report spectroscopic, electrochemical and structural data, including improved crystallographic data for the isomers of C₇₀(C₂F₅)₁₀ and C₆₀(C₂F₅)₁₀, and the first X-ray structural data for the dodecasubstituted perfluoethylated C₇₀ fullerene, C₇₀(C₂F₅)₁₂, which possesses unprecedented addition pattern.