Time-resolved fluorescence spectroscopy and imaging of proteinaceous binders used in paintings

The differentiation of proteins commonly found as binding media in paintings is presented based on spectrally resolved and time-resolved laser-induced fluorescence (LIF) and total emission spectroscopy. Proteins from eggs and animal glue were analysed with pulsed laser excitation at 248 nm (KrF excimer) and 355 nm (third harmonic of Nd:YAG) for spectrally resolved measurements, and at 337 nm (N₂) and 405 nm (N₂ pumped dye laser) for spectrally resolved lifetime measurements and fluorescence lifetime imaging (FLIM). Total emission spectra of binding media are used for the interpretation of LIF spectra. Time-resolved techniques become decisive with excitation at longer wavelengths as fluorescence lifetime permits the discrimination amongst binding media, despite minimal spectral differences; spectrally resolved measurements of fluorescence lifetime have maximum differences between the binding media examined using excitation at 337 nm, with maximum observed fluorescence at 410 nm. FLIM, which measures the average lifetime of the emissions detected, can also differentiate between media, is non-invasive and is potentially advantageous for the analysis of paintings. Figure The fluorescence of solid ox glue extracted from collagen can be visualised in this Total Fluorescence Spectrum; three different peaks from multiple fluorophores are present and allow the discrimination between collagen- and non-collagen proteinaceous binding media found in paintings     

Design and characterization of two-dye and three-dye binary fluorescent probes for mRNA detection

We report the design, synthesis, and characterization of binary oligonucleotide probes for mRNA detection. The probes were designed to avoid common problems found in standard binary probes such as direct excitation of the acceptor fluorophore and overlap between the donor and acceptor emission spectra. Two different probes were constructed that contained an array of either two or three dyes and were characterized using steady-state fluorescence spectroscopy, time-resolved fluorescence spectroscopy, and fluorescence depolarization measurements. The three-dye binary probe (BP-3d) consists of a Fam fluorophore which acts as a donor, collecting light and transferring it as energy to Tamra, which subsequently transfers energy to Cy5 when the two probes are hybridized to mRNA. This design allows the use of 488 nm excitation, which avoids the direct excitation of Cy5 and at the same time provides a good fluorescence resonance energy transfer (FRET) efficiency. The two-dye binary probe system (BP-2d) was constructed with Alexa488 and Cy5 fluorophores. Although the overlap between the fluorescence of Alexa488 and the absorption of Cy5 is relatively low, FRET still occurs due to their close physical proximity when the probes are hybridized to mRNA. This framework also decreases the direct excitation of Cy5 and reduces the fluorescence overlap between the donor and the acceptor. Picosecond time-resolved spectroscopy showed a reduction in the fluorescence lifetime of donor fluorophores after the formation of the hybrid between the probes and target mRNA. Interestingly, BP-2d in the presence of mRNA shows a slow rise in the fluorescence decay of Cy5 due to a relatively slow FRET rate, which together with the reduction in the Alexa488 lifetime provides a way to improve the signal to background ratio using time-resolved fluorescence spectra (TRES). In addition, fluorescence depolarization measurements showed complete depolarization of the acceptor dyes (Cy5) for both BP-3d (due to sequential FRET steps) and BP-2d (due to the relatively low FRET rate) in the presence of the mRNA target.     

Binding of 8-anilino-1-naphthalenesulfonate to lecithin:cholesterol acyltransferase studied by fluorescence techniques

The solvatochromic fluorescent probe 8-anilino-1-naphthalenesulfonate (ANS) has been used to study the hydrophobicity and conformational dynamics of lecithin:cholesterol acyltransferase (LCAT). The ANS to LCAT binding constant was estimated from titrations with ANS, keeping a constant concentration of LCAT (2 microM). Apparent binding constant was found to be dependent on the excitation. For the direct excitation of ANS at 375 nm the binding constant was 4.7 microM(-1) and for UV excitation at 295 nm was 3.2 microM(-1). In the later case, not only ANS but also tryptophan (Trp) residues of LCAT is being excited. Fluorescence spectra and intensity decays show an efficient energy transfer from tryptophan residues to ANS. The apparent distance from Trp donor to ANS acceptor, estimated from the changes in donor lifetime was about 3 nm and depends on the ANS concentration. Steady-state and time-resolved fluorescence emission and anisotropies have been characterized. The lifetime of ANS bound to LCAT was above 16 ns which is characteristic for it being in a hydrophobic environment. The ANS labeled LCAT fluorescence anisotropy decay revealed the correlation time of 42 ns with a weak residual motion of 2.8 ns. These characteristics of ANS labeled LCAT fluorescence show that ANS is an excellent probe to study conformational changes of LCAT protein and its interactions with other macromolecules.     

Absorption and fluorescence characteristics of photo-activated adenylate cyclase nano-clusters from the amoeboflagellate Naegleria gruberi NEG-M strain

The spectroscopic characteristics of BLUF (BLUF = sensor of blue light using flavin) domain containing soluble adenylate cyclase (nPAC = Naegleria photo-activated cyclase) samples from the amoeboflagellate Naegleria gruberi NEG-M strain is studied at room temperature. The absorption and fluorescence spectroscopic development in the dark was investigated over two weeks. Attenuation coefficient spectra, fluorescence quantum distributions, fluorescence quantum yields, and fluorescence excitation distributions were measured. Thawing of frozen nPAC samples gave solutions with varying protein nano-cluster size and varying flavin, tyrosine, tryptophan, and protein color-center emission. Protein color-center emission was observed in the wavelength range of 360-900 nm with narrow emission bands of small Stokes shift and broad emission bands of large Stokes shift. The emission spectra evolved in time with protein nano-cluster aging.     

Energy transfer in calixarene-based cofacial-positioned perylene bisimide arrays

The synthesis of multichromophoric perylene bisimide-calix[4]arene arrays with up to five perylene units (containing orange, violet, and green perylene bisimide chromophores) and of monochromophoric model compounds was achieved by subsequent imidization of mono-Boc functionalized calix[4]arene linkers with three different types of perylene bisimide dye units. The optical properties of all compounds were studied with UV/vis absorption and steady state and time-resolved fluorescence spectroscopy. Upon excitation of the inner orange dye at 490 nm of array 3, strong fluorescence emission of the outer green perylene bisimide (PBI) chromophore at 744 nm is observed. The fluorescence excitation spectra of compounds 3 and 4 (lambdadet = 850 nm) show all absorption bands of the parent chromophores (e.g., all perylene units contribute to the emission from S1 state of the green PBI). Thus, the fluorescence emission and excitation spectra as well as time-resolved data of fluorescence lifetimes in the absence (tauD = 5.1 ns) and in the presence of an acceptor (tauDA = 0.8 ns) suggest efficient energy transfer processes between the perylene bisimide dye units. For the bichromophoric array 4, the energy transfer rate is calculated to a value of 1.05 x 109 s-1. These results demonstrate highly efficient energy transfer in cofacially assembled dye arrays.     

Fluorescence Lifetime Spectroscopy of Glioblastoma Multiforme¶

Fluorescence spectroscopy of the endogenous emission of brain tumors has been researched as a potentially important method for the intraoperative localization of brain tumor margins. We investigated the use of time‐resolved, laser‐induced fluorescence spectroscopy for demarcation of primary brain tumors by studying the time‐resolved spectra of gliomas. The fluorescence of human brain samples (glioblastoma multiforme, cortex and white matter: six patients, 23 sites) was induced ex vivo with a pulsed nitrogen laser (337 nm, 3 ns). The time‐resolved spectra were detected in a 360–550 nm wavelength range using a fast digitizer and gated detection. Parameters derived from both the spectral‐ (intensities from narrow spectral bands) and the time domain (average lifetime) measured at 390 and 460 nm were used for tissue characterization. We determined that high‐grade gliomas are characterized by fluorescence lifetimes that varied with the emission wavelength (>3 ns at 390 nm, <1 ns at 460 nm) and their emission is overall longer than that of normal brain tissue. Our study demonstrates that the use of fluorescence lifetime not only improves the specificity of fluorescence measurements but also allows a more robust evaluation of data collected from brain tissue. Combined information from both the spectraland the time domain can enhance the ability of fluorescencebased techniques to diagnose and detect brain tumor margins intraoperatively.     

Front face fluorescence spectroscopy as a tool for the assessment of egg freshness during storage at a temperature of 12.2 degrees C and 87% relative humidity

The objective of this study was to investigate intrinsic fluorophores of thick albumen and egg yolk in order to assess egg freshness during storage at a temperature of 12.2 °C and 87% relative humidity (RH). A total of 126 intact brown-shelled eggs of the same flock (29 weeks of age) were stored for 1, 6, 8, 12, 15, 20, 22, 26, 29, 33, 40, 47 and 55 days. The emission fluorescence spectra of aromatic amino acids and nucleic acids (AAA + NA) (excitation: 250 nm; emission: 280-450 nm), fluorescent Maillard reaction products (FMRP) (excitation: 360 nm; emission: 380-580 nm) and the excitation spectra of vitamin A (emission: 410 nm; excitation: 270-350 nm) were scanned on thick albumen and egg yolk. Among the intrinsic fluorophores, only the principal component analysis (PCA) applied on the vitamin A fluorescence spectra allowed a good identification of eggs as a function of their storage time. Factorial discriminant analysis (FDA) was then applied on the first five principal components (PCs) of the PCA applied on each spectral data set. Regarding AAA + NA recorded on thick albumen, correct classification of 69.4% and 63.9% was observed for the calibration and validation sets, respectively. Quite similar results were obtained on AAA + NA scanned on egg yolks. The best results were obtained with vitamin A fluorescence spectra since 97.7% and 85.7% of the calibration and validation sets was obtained, respectively. These results showed that vitamin A fluorescence spectra provide useful fingerprints, mainly allow the identification of eggs during storage and could be considered as a powerful intrinsic probe for the evaluation of egg freshness.     

Assessment of the ageing of triterpenoid paint varnishes using fluorescence,Raman and FTIR spectroscopy

The assessment of the influence of natural and artificial ageing on the spectrofluorescence of triterpenoid varnishes dammar and mastic is the focus of this work. Both Fourier transform infrared (FTIR) microscopy using attenuated total reflectance and Raman spectroscopy have been employed for complementary molecular analysis of samples. Synchronous fluorescence spectroscopy, excitation emission spectroscopy, and statistical analysis of data have been used to monitor changes in the optical properties of varnish samples. Assessment of naturally and artificially aged samples using excitation emission spectroscopy suggests that extensive exposure to visible light does not lead to easily appreciable differences in the fluorescence of mastic and dammar; cluster analysis has been used to assess changes, which occur with artificial ageing under visible light, indicating that differences in the fluorescence spectra of aged triterpenoids may be insufficient for their discrimination. The results highlight significant differences between the initial fluorescence of films of dammar and mastic and the fluorescence, which develops with ageing and oxidation, and specific markers, which change with ageing in FTIR and Raman spectra, have been identified.     

Fluorescence of sanguinarine: fundamental characteristics and analysis of interconversion between various forms

The quaternary isoquinoline alkaloid, sanguinarine (SG) plays an important role in both traditional and modern medicine, exhibiting a wide range of biological activities. Under physiological conditions, there is an equilibrium between the quaternary cation (SG⁺) and a pseudobase (SGOH) forms of SG. In the gastrointestinal tract, SG is converted to dihydrosanguinarine (DHSG). All forms exhibit bright fluorescence. However, their spectra overlap, which limited the use of powerful techniques based on fluorescence spectroscopy/microscopy. Our experiments using a combination of steady-state and time-resolved techniques enabled the separation of individual components. The results revealed that (a) the equilibrium constant between SG⁺ and SGOH is pK _a = 8.06, while fluorescence of DHSG exhibited no changes in the pH range 5–12, (b) the SGOH has excitation/emission spectra with maxima at 327/418 nm and excited-state lifetime 3.2 ns, the spectra of the SG⁺ have maxima at 475/590 nm and excited-state lifetime 2.4 ns. The DHSG spectra have maxima at 327/446 nm and 2-exponential decay with components 4.2 and 2.0 ns, (c) NADH is able to convert SG to DHSG, while there is no apparent interaction between NADH and DHSG. These techniques are applicable for monitoring the SG to DHSG conversion in hepatocytes.     

Time-resolved and steady-state fluorescence spectroscopy of eumelanin and indolic polymers

Eumelanin plays a variety of important physiological roles in human skin. However, its structure and fundamental properties still remain poorly understood. Although the absorbance of eumelanin is broad and reveals little about its structure, a variety of techniques have revealed the presence of a disordered array of chromophores within the melanin compound. In order to examine the fluorescence decay dynamics of these chromophores, time-resolved spectroscopy was applied to solutions of synthetic eumelanin and a melanin-like polymer of N-methyl,5-hydroxy,6-methoxyindole (N-Me-5H6MI). Solutions were excited with 80 fs laser pulses at 355, 370, 390 and 400 nm, and decay time courses were acquired at 20 nm intervals between 400 and 600 nm for each excitation wavelength. Decay profiles for both eumelanin and the polymer exhibited a characteristic multiexponential behavior with decay times between 0.5 and 15 ns, although steady-state spectra for the polymer exhibited only two peaks. The long-decay component in the polymer showed a significant decrease in both amplitude (30-5%) and decay time (14-6 ns) with increasing emission wavelength. In contrast, the amplitude and decay time in melanin increased slightly (10-15% and 7-10 ns, respectively) from 400 to 520 nm emission, at which point they leveled off. These trends were consistent for all excitation wavelengths. These results suggest that the multiexponential behavior of melanin fluorescence is characteristic of each oligomer within the eumelanin compound, and is consistent with the assertion that the diversity of constituents within eumelanin provides it with a robustness in spectral properties.     

Development of a pulsed-laser,fiber-optic-based fluorimeter: determination of fluorescence decay times of polycyclic aromatic hydrocarbons in sea water

A fiber-optic-based system for remote measurement of time-resolved fluorescence emission spectra is described and characterized. A pulsed nitrogen laser is used to induce fluorescence and a time-gated, one-dimensional photodiode array is used to measure the decay of the fluorescence emission spectra. The results compare favorably with reported values for well characterized compounds having fluorescence decay times in the range 4–50 ns. The potential of using time-resolved fluorimetry (TRF) over fiber-optic cables as a means of improving the specificity of remote fluorescence determinations of spectrally similar polycyclic aromatic hydrocarbons in sea water is demonstrated.     

Component analysis of the fluorescence spectra of a lignin model compound

In order to test whether lignin fluorescence originates from discrete fluorophores, fluorescence emission spectra of the lignin model dehydrogenative polymer (DHP) were analyzed by the band deconvolution method and time-resolved analysis of both the excitation and emission spectra. Two series of 22 fluorescence emission spectra of DHP in chloroform/methanol (3:1, v/v) solution, and as a solid suspension in water, were deconvoluted into three fluorescence and one Raman Gaussian components. Emission spectra were obtained by stepwise variation of the excitation wavelength from 360 to 465 nm. Deconvolution was performed by nonlinear fitting of all three Gaussian parameters: area, width and position. Position of all components in a series was treated as a random variable and its approximate probability distribution (APD) calculated from a series of histograms with increasing number of abscissa intervals. A five peak multimodal APD profile was obtained for both series of DHP emission spectra. The mean fluorescence lifetime varied with wavelength both in the emission and the excitation decay-associated spectra (DAS), where four kinetic components were resolved. The shapes of the excitation spectra of the four components were quite different and gradually shifted bathochromically. The multicomponent nature of the DHP emission spectra along with the changes in the mean fluorescence lifetime and the form of the excitation DAS of the four components give evidence of the heterogeneous origin of fluorescent species emitting in the visible.     

Time-resolved fluorescence spectroscopy for illuminating complex systems

Over the years, the emissive characteristics (spectral, temporal, and polarization) of fluorophores have been widely used to probe a wide variety of systems. Fluorescence lifetime and rotational reorientation time measurements, in particular, offer a means to elucidate key details about complex systems. Further, because fluorescence occurs on the nanosecond (10⁻⁹ s) timescale, competing or perturbing kinetic processes like collisional quenching, solvent relaxation, energy transfer, and rotational reorientation can affect the fluorescence and hence be quantified. Thus, a carefully chosen and “placed” fluorophore can serve as an reporter on a wide range of nanosecond or faster events. This contribution is divided into three sections. The Theory section discusses time-resolved anisotropy and intensity decay kinetics (time and frequency domains), pump–probe spectroscopy, and up-conversion. The second section describes time-correlated single photon counting (TCSPC) and multifrequency phase-modulation fluorescence instruments. The final section is divided into subsections on the use of time-resolved fluorescence: (1) to study solvation dynamics, biochemical systems, polymer photophysics, and organized media; (2) as a tool in the separation sciences, microscopy, and sensing; and (3) coupled with multiphoton excitation strategies.     

5-氟尿嘧啶卟啉化合物的合成和光谱性质

首次合成并用元素分析、红外光谱、核磁和质谱等表征了6种新的5 氟尿嘧啶卟啉化合物. 对其紫外吸收、荧光性质和荧光寿命进行了研究,并与未修饰卟啉化合物光谱性质进行了比较. 5 氟尿嘧啶卟啉化合物荧光寿命为7 ns,受环境取代基和溶剂的影响较小.     

Influence of pulse-to-pulse delay for 532 nm double-pulse laser-induced breakdown spectroscopy of technical polymers

Laser induced breakdown spectroscopy (LIBS) is an emerging technique for fast and accurate compositional analysis of many different materials. We present a systematic study of collinear double-pulse LIBS on different technical polymers such as polyamide, polyvinyl chloride, polyethylene etc. Polymer samples were ablated in air by single-pulse and double-pulse Nd:YAG laser radiation (8 ns pulse duration) and spectra were recorded with an Echelle spectrometer equipped with an ICCD camera. We investigated the evolution of atomic and ionic line emission intensities for different delay times between the laser pulses (from 20 ns to 500 μs) at a laser wavelength of 532 nm. We observed double-pulse LIBS signals that were enhanced as compared to single-pulse measurements depending on the delay time and the type of polymer material investigated. LIBS signals of polymer materials that are enhanced by double-pulse excitation may be useful for monitoring the concentration of heavy metals in polymer materials.     

Hydrogen-bonding dynamics of free flavins in benzene and FAD in electron-transferring flavoprotein upon excitation

The dynamic natures of two hydrogen-bonding model systems, riboflavin tetrabutylate (RFTB)-trichloroacetic acid (TCA) and RFTB-phenol in benzene, and of electron-transferring flavoprotein (ETF) from pig kidney upon excitation of flavins was investigated by means of steady state and time-resolved fluorescence spectroscopy. In both model systems fluorescence intensities of RFTB decreased as TCA or phenol was added. The spectral characteristics of ETF under steady state excitation were quite similar to those of the RFTB-TCA system, but not to those of the RFTB-phenol system. The observed fluorescence decay curves of ETF fit well with the calculated decay curves with two lifetime components, as in the model systems. Averaged lifetime was 0.9 ns. The time-resolved fluorescence spectrum of ETF shifted toward longer wavelength with time after pulsed excitation, which was also observed in the RFTB-TCA system. In the RFTB-phenol system the emission spectrum did not shift at all with time. These results reveal that the dynamic nature of ETF can be ascribed to aliphatic hydrogen-bonding(s) of the isoalloxazine ring with surrounding amino acid(s). From the fluorescence characteristics of ETF in comparison with the model systems, human ETF and other flavoproteins, it was suggested that ETF from pig kidney does not contain Tyr-16 in the beta subunit, unlike human ETF.     

Singlet oxygen formation in monomeric and aggregated porphyrin c

The absorption and fluorescence spectra of monomeric and aggregated species present in aqueous solutions of porphyrin c have been resolved by steady-state and time-resolved spectroscopy. The dependence of the singlet oxygen formation yield (phi delta) on excitation wavelength has also been determined. In the Q-band spectral region, the aggregate absorption and emission spectra are shifted to longer wavelengths with respect to the monomer spectrum with phi delta (monomer) = 0.59 and phi delta (aggregate) = 0.33. The relevance of these findings to the optimization of irradiation conditions in tumour phototherapy using porphyrin c are discussed.     

Relaxation of photo-excitations in films of oligo- and poly-(para-phenylene vinylene) derivatives

The photo-luminescence from solid films of poly(para-phenylene vinylene) polymers and an oligomeric model system, consisting of seven repeat units, are investigated at low temperature (8 K) using time-resolved spectroscopic techniques. Results are compared to those for the materials in solution. In the case of the oligomer, the shape of the visible absorption band observed for the film is quite different from the band shape for the polymer in frozen solution and is characteristic of H-type aggregates. Theoretical models are presented describing the dependence of the band shape of absorption and emission spectra on intermolecular excited state interactions, electron-vibration coupling and disorder represented by distributions of the molecular excitation and intermolecular interaction energies. Using these models, it is concluded that intermolecular interactions in the film of the oligomer are strong (1400 cm⁻¹), and the disorder low, implying delocalization of the excitation over several molecules. In accordance with these models the fluorescence lifetime for the film (2 ns) is considerably longer than for isolated molecules in solution (0.45 ns). The emission spectra of the film, taken early after excitation, are consistent with delocalization of the excitation over several molecules. A time-dependent red shift of the fluorescence band is observed and interpreted in terms of migration of localized excitations between disorder induced trap sites, which exist in the low energy tail of the density of excited states. For the polymers, differences between the shape of the absorption bands of solid film and frozen solution are smaller than for the oligomer indicating that interchain interactions that are, on average, weaker than for the oligomer. For the polymer films, a time-dependent red shift of the emission is observed and fluorescence depolarization measurements provide direct evidence for migration of the photo-excitations between trap sites. For one polymer, a time dependent change in the band shape of the fluorescence after pulsed excitation is observed with the band shape of the long-lived emission being compatible with that expected for an excitation delocalized over at least two, nearly parallel aligned, chains. For a second polymer, the emission band shape and its time evolution indicate that the major part of the fluorescence originates from disorder induced luminescent sites. These results indicate that the spectroscopic properties of films of π-conjugated polymer critically depend on parameters such as density of defects and excited state interchain interaction energy.     

Global and target analysis of time-resolved fluorescence spectra of Di-9H-fluoren-9-yldimethylsilane: dynamics and energetics for intramolecular excimer formation

Dynamics and energetics for intramolecular excimer formation of a diarylsilane, di-9H-fluoren-9-yldimethylsilane (DFYDMS) have been investigated by means of ps time-resolved fluorescence spectroscopy and ab initio calculation. Multiple fluorescence decay curves were globally deconvolved to generate time-resolved fluorescence spectra and decay-associated spectra (DAS), from which species-associated spectra (SAS) were obtained. It is shown in the global analysis that there are at least three excited states: Two states are the locally excited (LE) states (lambda(max) approximately 320 nm) having lifetimes of 0.70 +/- 0.04 and 1.75 +/- 0.02 ns, and another is the excimer state (lambda(max) approximately 400 nm) having a lifetime of 7.34 +/- 0.02 ns. The species which decays with 0.70 ns evolves into a species with a red-shifted spectrum, which in turn decays in 7.34 ns. The experimental and ab initio results indicate that the rise time of 0.70 ns corresponds to the conversion of the initial S(1) LE state having a near sandwich geometry to the S(1) excimer state adopting a true sandwich geometry.     

Inter- and intra-molecular radiationless transitions of NO2 at around 454.6 nm

The continuum emission of NO₂ was investigated on the basis of time-resolved excitation and fluorescence spectra. The analysis of the observed spectra indicated the coexistence of inter- and intra-molecular relaxation processes of NO₂. The continuum emission, the relative intensity of which at longer wavelengths increases more drastically as time goes on after excitation (2–6 μs), was concluded to originate predominantly from molecular collisions in a stepwise deactivation process. A fast component of the continuum emission, with a relative intensity with respect to the discrete band (I_C/I_D) independent of time and of NO₂ pressure, appeared in collision-free conditions (<20 ns, 15 mTorr), and it was concluded to originate from radiationless transitions in isolated molecules.