Supramolecular assembly facilitating adsorbate-induced chiral electronic states in a metal surface

Through the application of optically active second-harmonic generation measurements (OA-SHG) we have demonstrated that the adsorption of amino acids cysteine (HSCH(2)CHNH(2)COOH) and penicillamine (HSC(CH3)(2)CHNH(2)COOH) from solution can induce chiral electronic states in an initially achiral polycrystalline Au film. The chiral induction is strongly dependent upon the pH of the deposition solution; adsorption of penicillamine and cysteine under acidic conditions (pH = 3) induces the same level of optical activity, whereas at pH = 11, the optical activity induced by cysteine is reduced by ca. 50% and penicillamine does not induce optical activity at all. The pH dependence indicates that the presence of interadsorbate hydrogen bonds, and consequently the supramolecular assembly of the adsorbates, facilitates the induction of chiral electronic states in the Au surface. This observation demonstrates that the symmetry properties of the extended structure of the self-assembled layer, and not the local adsorption geometry of the isolated adsorbed moiety, play the lead role in the induction of chiral metallic electronic states. The dependence of the chiral induction on COOH groups is identical to that observed in studies of optical activity in chiral thiol-protected nanoparticles, suggesting a common mechanism for the chiral perturbation in extended films and nanoparticles.     

Thermal decomposition of HSCH2CH2OH on Cu(111): identification and adsorption geometry of surface intermediates

X-ray photoelectron spectroscopy has been employed to study the surface intermediates from the thermal decomposition of HSCH2CH2OH on Cu(111) at elevated temperatures. On the basis of the changes of the core-level binding energies of C, O, and S as a function of temperature, it is found that HSCH2CH2OH decomposes sequentially to form -SCH2CH2OH and -SCH2CH2O-. Theoretical calculations based on density functional theory for an unreconstructed one-layer copper surface suggest that -SCH2CH2OH is preferentially bonded at a 3-fold hollow site, with an adsorption energy lower than the cases at bridging and atop sites by 15.6 and 47.5 kcal x mol(-1), respectively. Other structural characteristics for the energy-optimized geometry includes the tilted C-S bond (14.1 degrees with respect to the surface normal), the C-C bond titled toward a bridging site, and the C-O bond pointed toward the surface. In the case of -SCH2CH2O- on Cu(111), the calculations suggest that the most probable geometry of the adsorbate has its S and O bonded at hollow and bridging sites, respectively. With respect to the surface normal, the angles of the S-C and O-C are 27.9 and 34.0 degrees.     

Characterization of enantiospecific chemisorption on chiral Cu surfaces vicinal to Cu(111) and Cu(100) using density functional theory

Surfaces of simple fcc metals such as Cu with nonzero and unequal Miller indices are intrinsically chiral. Density functional theory (DFT) calculations are a useful way to study the enantiospecific adsorption of small chiral molecules on these chiral metal surfaces. We report DFT calculations of seven chiral molecules on several structurally distinct chiral Cu surfaces. These surfaces include two surfaces with (111)-oriented terraces and one with (100)-oriented terraces. Calculations are also described on a surface that was modified to mimic the surface structures that typically appear on real metal surfaces following thermally driven fluctuations in step edges. Our results provide initial information on how variation in the surface structure of intrinsically chiral metal surfaces can affect the enantiospecific adsorption of small molecules on these surfaces.     

Quasi chiral phase separation in a two-dimensional orientationally disordered system: 6-nitrospiropyran on Au(111)

The adsorption and chiral expression of 6-nitrospiropyran (SP6) molecules on a Au(111) surface are studied by scanning tunneling microscopy (STM) in combination with density functional theory (DFT) calculations. Both the chirality and the adsorption orientation of each adsorbed SP6 molecule are determined. The racemic mixture of SP6 enantiomers forms two-dimensional (2D) domains with same close packed positional orders but different internal orientational structures due to the random distribution of two adsorption orientations in each domain. However, all these orientationally disordered 2D domains undergo spontaneous quasi chiral phase separation; the 2D SP6 domains separate into 1D homochiral chains in which the SP6 molecules adopt two orientations randomly. This novel phenomenon is attributed to the preferential formation of the energetic favorable configurations with both the C-H...O weak hydrogen bonds and the pi-stacking of the two moieties of each SP6 molecule.     

Surface bonding and dynamical behavior of the CH3SH molecule on Au(111)

The chemisorption of the undissociated CH3SH molecule on the Au(111) surface has been studied at 5 K using scanning tunneling microscopy (STM) and density functional theory (DFT) calculations. The molecule was found to adsorb on atop Au sites on the defect-free surface. CH3SH undergoes hindered rotation about the Au-S bond on the defect-free surface which is seen in STM as a time-averaged 6-fold pattern. The pattern suggests that the potential minima directions occur for the rotating molecule at the six hollow sites surrounding the atop adsorption site. The barrier for rotation, obtained by DFT calculations, is approximately 0.1 kcal.mol(-1). At low coverages, preferential adsorption occurs at defect sites in the surface, namely, the herringbone "elbows" and random atomic step sites. Molecules adsorbed on these sites do not exhibit rotational freedom.     

Enantiospecific adsorption of cysteine at chiral kink sites on Au(110)-(1 x 2)

Enantiospecific adsorption of cysteine molecules onto chiral kink sites on the Au(110)-(1x2) surface was observed by scanning tunneling microscopy. l- and d-cysteine dimers were found to adopt distinctly different adsorption geometries at S kinks, which can be understood from the need to reach specific, optimum molecule-substrate interaction points. Extended, homochiral domains of l/d-cysteine were furthermore observed to grow preferentially from R/S kinks. The results constitute the first direct, microscopic observation of enantiospecific molecular interaction with chiral sites on a metal single-crystal surface.     

Enhanced adsorption energy of Au1 and O2 on the stoichiometric TiO2(110) surface by coadsorption with other molecules

During heterogeneous catalysis the surface is simultaneously covered by several adsorbed molecules. The manner in which the presence of one kind of molecule affects the adsorption of a molecule of another kind has been of interest for a long time. In most cases the presence of one adsorbate does not change substantially the binding energy of another adsorbate. The calculations presented here show that the stoichiometric rutile TiO(2)(110) surface, on which one of the compounds -OH, Au(3), Au(5), Au(7), Na, K, or Cs or two different gold strips was preadsorbed, behaves differently: the binding energy of Au(1) or O(2) to such a surface is much stronger than the binding to the clean stoichiometric TiO(2)(110) surface. Moreover, the binding energy of Au(1) or O(2) and the amount of charge they take from the surface when they adsorb are the same, regardless of which of the above species is preadsorbed. The preadsorbed species donate electrons to the conduction band of the oxide, and these electrons are used by Au(1) or O(2) to make stronger bonds with the surface. This suggests that adding an electron to the conduction band of the clean stoichiometric TiO(2)(110) slab used in the calculation will affect similarly the adsorption energy of Au(1) or O(2). Our calculations show that it does. We have also studied how the preadsorption of Au(4) or Au(6) affects the binding of Au(1) or O(2) to the surface. These two gold clusters do not donate electrons to the surface when they bind to it and therefore should not influence substantially the binding energy of Au(1) or O(2) to the surface. However, adsorbing O(2) or Au(1) on the surface forces the clusters to change their structure into that of isomers that donate charge to the oxide. This charge is used by Au(1) or O(2) to bind to the surface and the energy of this bond exceeds the isomerization energy. As a result the surface with the isomerized cluster is the lowest energy state of the system. We believe that these results can be generalized as follows. The molecules that we coadsorbed with Au(1) or O(2) donate electrons to the oxide and are Lewis bases. By giving the surface high energy electrons, they turn it into a Lewis base and this increases its ability to bind strong Lewis acids such as Au(1) and O(2). We speculate that this kind of interaction is general and may be observed for other oxides and for other coadsorbed Lewis base-Lewis acid pairs.     

A Periodic Density Functional Study on Adsorption Properties of Methoxy on Au（111） Surface

1INTRODUCTION Methoxy(CH3O)has been identified as the first intermediate in the decomposition of methanol on extensive list of clean transition metal surfaces,such as Ni(100)[1],Cu(100)[2,3],Cu(111)[4],Ag(111)[5],Au(110)[6],Pd(111)[7]and Ru(0001)[8].The electronic structure of the metal is a determining factor in OH bond scission.In fact,group IB clean surfaces have shown very low activity towards this reaction,al-though there are reports on low amounts of methoxy formed on clean Cu(…     

甲胺分子多光子电离质谱研究

胜多光子电离飞行时间质谱法，利用可调谐脉冲激光器，测得了甲胺分子在不同激光波长和激光功率下的多光子电离和解离产物。母体离子ＣＨ３ＮＨ＾＋２的离解速常数随激光发波长的增大而减小。     

Adsorption of gold on TiC(001): Au-C interactions and charge polarization

High-resolution photoemission and first-principles density-functional slab calculations were used to study the adsorption of gold on a TiC(001) surface. A positive shift in the binding energy of the C 1s core level is observed after the deposition of Au on the metal carbide surface. The results of the density-functional calculations corroborate the formation of Au-C bonds. In general, the bond between Au and the TiC(001) surface exhibits very little ionic character, but there is a substantial polarization of electrons around Au that affects its chemical properties.     

卤离子桥联铜(Ⅱ)配合物的结构相变与热致磁性变化

以质子化2-丙胺为阳离子合成了铜(Ⅱ)配合物[(CH3)2CHNH3]CuBr3-xClx(x＝0~3), 该系列配合物是卤离子桥联的一维链状结构. 磁性研究表明, 配合物为反铁磁相互作用, 其χmT在高温时出现突跃, 对应于结构相变. Cu(Ⅱ)配离子在高温呈拉长八面体结构, 在低温呈四方锥结构, 伴随着桥连方式的改变, 配合物从低温相的反铁磁性变为高温相的铁磁性. 根据晶体场理论分析, 由于配位X-的不同导致晶体场分裂能发生变化, 相转变温度伴随着氯离子所占比例不同呈现规律性变化. 通过配合物[(CH3)2CHNH3]CuX3(X-=Br-或Cl-)的磁性比较提出了[(CH3)2CHNH3]CuBr3-xClx(x=1, 2)的可能结构, 并使用铁磁均匀一维链模型对高温相配合物磁性进行了拟合.     

Photodissociation of S atom containing amino acid chromophores

Photodissociation of 3-(methylthio)propylamine and cysteamine, the chromophores of S atom containing amino acid methionine and cysteine, respectively, was studied separately in a molecular beam at 193 nm using multimass ion imaging techniques. Four dissociation channels were observed for 3-(methylthio)propylamine, including (1) CH(3)SCH(2)CH(2)CH(2)NH(2)-->CH(3)SCH(2)CH(2)CH(2)NH+H, (2) CH(3)SCH(2)CH(2)CH(2)NH(2)-->CH(3)+SCH(2)CH(2)CH(2)NH(2), (3) CH(3)SCH(2)CH(2)CH(2)NH(2)-->CH(3)S+CH(2)CH(2)CH(2)NH(2), and (4) CH(3)SCH(2)CH(2)CH(2)NH(2)-->CH(3)SCH(2)+CH(2)CH(2)NH(2). Two dissociation channels were observed from cysteamine, including (5) HSCH(2)CH(2)NH(2)-->HS+CH(2)CH(2)NH(2) and (6) HSCH(2)CH(2)NH(2)-->HSCH(2)+CH(2)NH(2). The photofragment translational energy distributions suggest that reaction (1) and parts of the reactions (2), (3), (5) occur on the repulsive excited states. However, reaction (4), (6) occur only after the internal conversion to the electronic ground state. Since the dissociation from an excited state with a repulsive potential energy surface is very fast, it would not be quenched completely even in the condensed phase. Our results indicate that reactions following dissociation may play an important role in the UV photochemistry of S atom containing amino acid chromophores in the condensed phase. A comparison with the potential energy surface from ab initio calculations and branching ratios from RRKM calculations was made.     

TPD and FT-IRAS investigation of ethylene oxide (EtO) adsorption on a Au(211) stepped surface

Adsorption of ethylene oxide, CH(2)CH(2)O (EtO), on a Au(211) stepped surface was studied by temperature programmed desorption (TPD) and Fourier transform infrared reflection-absorption spectroscopy (FT-IRAS). Ethylene oxide was completely reversibly adsorbed, and desorbed molecularly during TPD following adsorption on Au(211) at 85 K. EtO TPD peaks appeared at 115 K from the multilayer film and 140 and 170 K from the monolayer. Desorption at 140 K was attributed to EtO desorption from terrace sites, and that at 170 K to EtO desorption from step sites. Desorption activation energies and corresponding adsorption energies were estimated to be 8.4 and 10.3 kcal mol(-1), respectively. The EtO ring (C(2)O) deformation band appeared in IRAS at 865 cm(-1) for EtO in multilayer films and when adsorbed in the monolayer at terrace sites. The stronger chemisorption bonding of EtO at Au step sites slightly weakens the bonding within the molecule and causes a small red-shift of this band to 850 cm(-1) for adsorption at step sites. EtO presumably binds via the oxygen atom to the surface, and observation of the EtO-ring absorption band in IRAS establishes that the molecular ring plane of EtO adsorbed at step and terrace sites is nearly upright with respect to the crystal surface plane.     

From local adsorption stresses to chiral surfaces: (R,R)-tartaric acid on Ni(110).

The chiral molecule (R,R)-tartaric acid adsorbed on nickel surfaces creates highly enantioselective heterogeneous catalysts, but the nature of chiral modification remains unknown. Here, we report on the behavior of this chiral molecule with a defined Ni(110) surface. A combination of reflection absorption infrared spectroscopy, scanning tunneling microscopy, and periodic density functional theory calculations reveals a new mode of chiral induction. At room temperatures and low coverages, (R,R)-tartaric acid is adsorbed in its bitartrate form with two-point bonding to the surface via both carboxylate groups. The molecule is preferentially located above the 4-fold hollow site with each carboxylate functionality adsorbed at the short bridge site via O atoms placed above adjacent Ni atoms. However, repulsive interactions between the chiral OH groups of the molecule and the metal atoms lead to severely strained adsorption on the bulk-truncation Ni(110) surface. As a result, the most stable adsorption structure is one in which this adsorption-induced stress is alleviated by significant relaxation of surface metal atoms so that a long distance of 7.47 A between pairs of Ni atoms can be accommodated at the surface. Interestingly, this leads the bonding Ni atoms to describe a chiral footprint at the surface for which all local mirror symmetry planes are destroyed. Calculations show only one chiral footprint to be favored by the (R,R)-tartaric acid, with the mirror adsorption site being unstable by 6 kJ mol(-1). This energy difference is sufficient to enable the same local chiral reconstruction and motif to be sustained over 90% of the system, leading to an overall highly chiral metal surface.     

Surface plasmon resonance spectroscopic chiral discrimination using self-assembled leucine derivative monolayer

Pirkle-type chiral stationary phases (CSPs) showed excellent enantiomeric separation for amino acid derivatives by forming energetically different two transient diastereomeric pi-pi donor-acceptor complexes with two enantiomers. A CSP derived from N-(3,5-dinitrobenzoyl) leucine with a thiol ending group for immobilization on Au was synthesized and self-assembled on Au surface as chiral sensing layer. The monolayer characterized by spectroscopic and microscopic methods such as AFM, FTIR reflection absorption spectroscopy (FTIR-RAS) and cyclic voltammetry (CV). The enantiospecific detection onto CSP of the leucine derivative was studied by surface plasmon resonance (SPR). (S)-CSP SAM showed high chiral differential detection for (S)-analyte in a range of 1.0x10(-9) to 1.0x10(-4) M. In combination with the SPR method, the leucine derivative monolayer provided a reliable and simple experimental platform for enantiospecific detection.     

利用纳米离子组装的方法制备SERS活性基底

A simple method for fabricating SERS-active substrate using Au nanoparticles is reported. HSCH2CH2NH2 was self-assembled on the Au/glass substrate, then nanoparticles of colloidal gold were bound to the surface. The SERS effect of such prepared substrate was studied by using BPE and an azobenzene thiol derivated compound and the SERS enhanced factor was found about 3×103.     

A general route to mono- and disubstituted divinyl sulfones: acyclic Michael acceptors for the synthesis of polyfunctionalized cyclic sulfones

Nucleophilic C-S bond formation using easily available β-hydroxysulfonate derivatives allowed direct access to new mono- and disubstituted divinyl sulfones. Our strategy uses thioethanol (HSCH(2)CH(2)OH) and its analogues such as HSCH(2)CH(Y)OH generated in situ. The strategy also allows the synthesis of modified divinyl sulfones attached to chiral appendages like carbohydrates. Bis-heteronucleophilic Michael addition reactions with 1 equiv of a primary amine afforded new generations of S,S-dioxothiomorpholine derivatives known for their therapeutic applications. Further synthetic manipulations of some of these cyclic compounds led to the synthesis of novel bicyclic derivatives.     

Methanethiolate adsorption site on Au(111): a combined STM/DFT study at the single-molecule level

The chemisorptive bonding of methanethiolate (CH(3)S) on the Au(111) surface has been investigated at a single-molecule level using low-temperature scanning tunneling microscopy (LT-STM) and density functional theory (DFT). The CH(3)S species were produced by STM-tip-induced dissociation of methanethiol (CH(3)SH) or dimethyl disulfide (CH(3)SSCH(3)) at 5 K. The adsorption site of an isolated CH(3)S species was assigned by comparing the experimental and calculated STM images. We conclude that the S-headgroup of chemisorbed CH(3)S adsorbs on the 2-fold coordinated bridge site between two Au atoms, consistent with theoretical predictions for CH(3)S on the nondefective Au(111) surface. Our assignment is also supported by the freezing of the tip-induced rotational dynamics of a single CH(3)SH molecule upon conversion to CH(3)S via deprotonation.     

The chemisorption of coronene on Si(001)-2 x 1

Coronene (C24H12) adsorption on the clean Si(001)-2 x 1 surface was investigated by scanning tunneling microscopy and by density-functional calculations. The coronene adsorbed randomly at 25 degrees C on the surface and did not form two-dimensional islands. The scanning tunneling microscopy measurements revealed three adsorption sites for the coronene molecule on the Si(001) surface at low coverage. The major adsorption configuration involves coronene bonding to four underlying Si atoms spaced two lattice spacings apart in a dimer row. The two minor adsorption configurations involve asymmetrical bonding of a coronene molecule between Si dimer rows and form surface species with a mirror plane symmetry to their chiral neighbor species. The two minor bonding arrangements are stabilized by a type-C defect on the Si(001) surface.     

Tail molecule dependence of thiolate adsorption on Au(111) surface: Theoretical study

The adsorption of thiolates with various tail molecules on the Au(111) surface has been investigated by first-principles calculations. We have considered six typical thiolate molecules, that is, methylthiolate, ethylthiolate, ethylenethiolate, acetylenethiolate, benzenethiolate, and thiophenethiolate. It is found that these thiolates exhibit little difference in their stable adsorption geometries. They are adsorbed at the bridge site with being significantly tilted from the surface normal. The adsorption energy of thiolate on Au, on the other hand, largely varies depending on the type of tail molecule, and is linearly proportional to the binding energy of thiolate with H. We discuss the tail molecule dependence in terms of the bonding environment around the C atom connected to the head S atom.