Studies of CO adsorption on Pt(100), Pt(410), and Pt(110) surfaces using density functional theory

Adsorption of CO on Pt(100), Pt(410), and Pt(110) surfaces has been investigated by density functional theory (DFT) method (periodic DMol(3)) with full geometry optimization and without symmetry restriction. Adsorption energies, structures, and vibrational frequencies of CO on these surfaces are studied by considering multiple possible adsorption sites and comparing them with the experimental data. The same site preference as inferred experiments is obtained for all the surfaces. For Pt(100), CO adsorbs at the bridge site at low coverage, but the atop site becomes most favorable for the c(2 x 2) structure at 1/2 monolayer. For Pt(410) (stepped surface with (100) terrace and (110) step), CO adsorbs preferentially at the atop site on the step edge at 1/4 monolayer, but CO populates also at other atop and bridge sites on the (100) terrace at 1/2 monolayer. The multiple possible adsorption sites probably correspond to the multiple states in the temperature-programmed desorption spectra for CO desorption. For Pt(110), CO adsorbs preferentially at the atop site on the edge for both the reconstructed (1 x 2) and the un-reconstructed (1 x 1) surfaces. When adjacent sites along the edge row begin to be occupied, the CO molecules tilt alternately by ca. 20 degrees from the surface normal in opposite directions for both the (1 x 2) and (1 x 1) surfaces.     

DFT investigation of CO adsorption on Pt(211) and Pt(311) surfaces from low to high coverage

Adsorption of CO on Pt(211) and Pt(311) surfaces has been investigated by the density functional theory (DFT) method (periodic DMol3) with full geometry optimization. Adsorption energies, structures, and C-O stretching vibrational frequencies are studied by considering multiple possible adsorption sites and comparing them with the experimental data. The calculated C-O stretching frequencies agree well with the experimental ones, and precise determination of adsorption sites can be carried out. For Pt(211), CO adsorbs at the atop site on the step edge at low coverage, but CO adsorbs at the atop and bridge sites simultaneously on both the step edge and the terrace with further increasing CO coverage. The present results interpret the reflection adsorption infrared (RAIR) spectra of Brown and co-workers very well from low to high coverage. For Pt(311), CO adsorbs also at the atop site on the step edge at low coverage. The lifting of reconstruction by CO adsorption occurs also for Pt(311), whereas the energy gain for lifting the reconstruction of the Pt(311) surface is smaller than that for Pt(110). The largest difference between the stepped Pt(211)/Pt(311) and Pt(110) surfaces is the occupation on the edge sites at higher coverage. For the stepped surfaces, the bridge site begins to be occupied at higher coverage, whereas the atop site is always occupied for the Pt(110) surface.     

Ridge-bridge adsorption of molecular oxygen on Pt[110](1 x 2) from first principles

The chemisorption of molecular oxygen on the missing-row reconstructed Pt[110](1 x 2) surface has been investigated using ab initio calculations based on spin-density functional theory. The calculated energetic, structural, vibrational, and electronic properties of the chemisorbed O2 species are discussed in terms of the available experimental data. We find that adsorption in the ridge-bridge site is strongly preferred on energetic grounds, relative to adsorption on the [111] microfacets or in the valley sites of the reconstructed surface. We argue in favor of initial adsorption in the ridge-bridge sites, followed by adsorption in the valley long-bridge sites at higher coverages, without excluding the possibility of bridge-site adsorption on the [111] microfacets.     

Complex thermal chemistry of vinyltrimethylsilane on Si(100)-2x1

The surface chemistry of vinyltrimethylsilane (VTMS) on Si(100)-2x1 has been investigated using multiple internal reflection-Fourier transform infrared spectroscopy, Auger electron spectroscopy, and thermal desorption mass spectrometry. Molecular adsorption of VTMS at submonolayer coverages is dominating at cryogenic temperatures (100 K). Upon adsorption at room temperature, chemical reaction involving rehybridization of the double bond in VTMS occurs. Further annealing induces several reactions: molecular desorption from a monolayer by 400 K, formation and desorption of propylene by 500 K, decomposition leading to the release of silicon-containing products around 800 K, and, finally, surface decomposition leading to the production of silicon carbide and the release of hydrogen as H(2) at 800 K. This chemistry is markedly different from the previously reported behavior of VTMS on Si(111)-7x7 surfaces resulting in 100% conversion to silicon carbide. Thus, some information about the surface intermediates of the VTMS reaction with silicon surfaces can be deduced.     

Coverage-dependent adsorption of atomic sulfur on Fe(110): a DFT study

Adsorption of atomic sulfur at different coverages on the Fe(110) surface is examined using density functional theory (DFT) in order to investigate the effect that adsorbate-adsorbate interactions may have on the surface properties. S is adsorbed in the high-symmetry adsorption sites: 4-fold hollow, bridge, and atop sites in the following surface arrangements: c(2 x 2) and p(1 x 1) which correspond to coverages of 1/2 and 1 monolayer, respectively. The binding energy, work function change, adsorption geometry, charge density distribution, magnetic properties, and density of states are examined and compared to our previous study of S adsorbed at 1/4 monolayer coverage and p(2 x 2) arrangement [Spencer et al. Surf. Sci. 2003, 540, 420]. It was found that S forms polar covalent bonds to the surface. The bonding goes from being S-Fe dominated at the low coverages to being S-S dominated at the higher coverages where the S atoms are located closer together on the surface and interact with each other.     

Dissociative adsorption of NO on TiO2 (110)-(1 x 2) surface: Ti2O3 rows as actives sites for the adsorption

The interaction of NO with TiO2 (110)-(1 x 2) surface has been studied by X-ray photoelectron spectroscopy, ultraviolet photoelectron spectroscopy, Auger electron spectroscopy, and low-energy electron diffraction, with the aim to clarify the role of ordered defects in NO reactivity toward TiO2. The interaction was studied for exposures up to 2000 L. However, the main effects occur already in the first 2 L. The exposure of the surfaces to NO resulted in the healing of defect sites without adsorption of N and low-energy electron diffraction shows that the surface (1 x 2) symmetry is not lost after the NO dose.     

Chemical structure and orientation of ethylene on Si(114)-(2 x 1)/c(2 x 2)

The basic chemical structure and orientation of ethylene chemisorbed on Si(114)-(2 x 1) at submonolayer coverage is characterized in ultrahigh vacuum using transmission Fourier transform infrared (FTIR) spectroscopy. The spectra are consistent with di-sigma bonding of ethylene to the surface with a preferential molecular orientation over macroscopic lengths. These results are supported by density functional theory (DFT) calculations of vibrational frequencies for optimized ethylene-Si(114) structures occupying the dimer and rebonded atom surface sites. A detailed analysis of the strong angular and polarization dependence of the C-H stretching mode intensities is also consistent with the adsorption structures identified by DFT, indicating that ethylene chemisorbs with the C-C bond axis parallel to the structural rows oriented along the [10] direction on the Si(114)-(2 x 1) surface. The results indicate that the unique structure of this surface makes it an excellent template for elucidating relationships between surface structure and organic reaction mechanisms on silicon.     

A Periodic Density Functional Study on Adsorption Properties of Methoxy on Au（111） Surface

1INTRODUCTION Methoxy(CH3O)has been identified as the first intermediate in the decomposition of methanol on extensive list of clean transition metal surfaces,such as Ni(100)[1],Cu(100)[2,3],Cu(111)[4],Ag(111)[5],Au(110)[6],Pd(111)[7]and Ru(0001)[8].The electronic structure of the metal is a determining factor in OH bond scission.In fact,group IB clean surfaces have shown very low activity towards this reaction,al-though there are reports on low amounts of methoxy formed on clean Cu(…     

Quantum chemical prediction of reaction pathways and rate constants for dissociative adsorption of CO(x) and NO(x) on the graphite (0001) surface

We present predictions of reaction rate constants for dissociative adsorption reactions of CO(x) (x = 1, 2) and NO(x) (x = 1, 2) molecules on the basal graphite (0001) surface based on potential energy surfaces (PES) obtained by the integrated ONIOM(B3LYP:DFTB-D) quantum chemical hybrid approach with dispersion-augmented density functional tight binding (DFTB-D) as low level method. Following an a priori methodology developed in a previous investigation of water dissociative adsorption reactions on graphite, we used a C(94)H(24) dicircumcoronene graphene slab as model system for the graphite surface in finite-size molecular structure investigations, and single adsorbate molecules reacting with the pristine graphene sheet. By employing the ONIOM PES information in RRKM theory we predict reaction rate constants in the temperature range between 1,000 and 5,000 K. We find that among CO(x) and NO(x) adsorbate species, the dissociative adsorption reactions of CO(2) and both radical species NO and NO(2) are likely candidates as a cause for high temperature oxidation and erosion of graphite (0001) surfaces, whereas reaction with CO is not likely to lead to long-lived surface defects. High temperature quantum chemical molecular dynamics simulations (QM/MD) at T = 5,000 K using on-the-fly DFTB-D energies and gradients confirm the results of our PES study.     

氧在CuCl(111)表面吸附的密度泛函理论研究

运用广义梯度密度泛函理论的PW91方法结合周期平板模型,在DNP基组下研究了氧分子和氧原子在CuCl(111)表面上的吸附.对氧分子在CuCl(111)表面吸附的相关计算和比较发现,覆盖度为0.25单层时的吸附构型为稳定的吸附构型,氧分子倾斜地吸附在CuCl(111)表面的顶位时比较稳定,吸附后O2分子的伸缩振动频率与自由O2分子相比发生了红移.态密度和Mulliken电荷布居分析结果表明,整个吸附体系发生了由Cu原子向O2分子的电荷转移.氧原子在CuCl(111)表面吸附的计算结果表明,氧原子倾向于以穴位(hollow)吸附在CuCl(111)表面,通过Mulliken电荷布居和态密度分析对氧原子在CuCl表面的吸附行为作了进一步探讨.     

A density functional study of NO adsorption and decomposition on Ni(211) and Pd(211) surfaces

The adsorption and decomposition of NO have been investigated by using density functional theory method at the generalized gradient approximation level. We have performed calculations on adsorption energies and structures of NO on Ni(211) and Pd(211) surfaces with full-geometry optimization and compared them with the experimental data. The most favorite adsorption on both surfaces occurs at the bridge site parallel to step edge (sb), while the energy difference from the second favorite site of a threefold hollow site near step edge is less than 0.1 eV. Decomposition pathways have been investigated with transition state search. The decomposition pathway, where NO leans toward the step, is most probable for both surfaces. The overall activation energy for decomposition is 0.39 and 1.26 eV for Ni(211) and Pd(211), respectively. The present results clearly show that the NO molecules on Pd(211) are less activated than those on Ni(211). We have studied also reorganization of NO on Pd(211) at higher coverages up to 1/3 ML (monolayer) [three NO molecules in a (3 x 1) unit cell]. The site occupation is not in a sequential manner as the NO coverage is increased, and a reorganization of NO adsorbates occurs (the NO molecule at sb becomes tilting up at higher coverage), which can interpret the experimental data of Yates and co-workers very well.     

水在HfO2(111)和(110)表面的吸附与解离

运用广义梯度近似密度泛函理论方法(GGA-PW91)结合周期平板模型, 研究水分子在二氧化铪(111)和(110)表面不同吸附位置在不同覆盖度下的吸附行为. 通过比较不同吸附位的吸附能和几何构型参数发现:(111)和(110)表面铪原子(top 位)是活性吸附位. 水分子与表面的吸附能值随覆盖度的变化影响较小. 在(111)和(110)表面, 水分子都倾向以氧端与表面铪原子相互作用. 同时也计算了羟基、氧和氢在表面的吸附, Mulliken 电荷布居, 态密度及部分频率. 结果表明, 在两种表面羟基以氧端与表面铪相互作用, 氧原子与表面铪和氧原子同时成键, 而氢原子直接与表面氧原子相互作用形成羟基. 通过过渡态搜索, 水分子在(111)和(110)表面发生解离, 反应能垒分别为9.7和17.3 kJ·mol^-1, 且放热为59.9和47.6 kJ·mol^-1.     

First-principles study of the adsorption of cesium on Si(001)(2 x 1) surface

First-principles calculations based on density functional theory-generalized gradient approximation method have been performed on cesium adsorption on Si(001)(2 x 1) surface. The optimized geometries and adsorption energies have been obtained and the preferred binding sites have been determined for the coverage (Theta) of one monolayer and half a monolayer. At Theta = 0.5 ML the most stable adsorption site is shown to be T3 site. At Theta = 1 ML two Cs atoms are adsorbed at HH and T3 sites, respectively. It was found that the saturation coverage of Cs for the Si(001)(2 x 1)-Cs surface is one monolayer instead of half a monolayer. This finding supports the majority of experimental observations but does not support recent coaxial impact collision ion scattering spectroscopy investigations [Surf. Sci. 531, L340 (2003)] and He(+) Rutherford backscattering spectroscopy studies [Phys. Rev. B 62, 4545 (2000)]. Mulliken charge and overlap population analysis showed that the Cs-Si bond is indeed ionic rather than polarized covalent as generally assumed for alkali metal (AM) on Si(001)(2 x 1) surface. Geometrical structure analysis seems to have limitations in determining the nature of AM-substrate bond. We also found that the silicon surface is metallic and semiconducting for the coverages of 0.5 and 1 ML, respectively.     

Interaction of alcohols and ethers with a-CF(x) films

The surfaces of the magnetic data storage hard disks used in computers are coated with a thin film of amorphous carbon and a layer of perfluoropolyalkyl ether (PFPE) lubricant. Both protect the surface of the magnetic layer from contact with the read-write head flying over the disk surface. Although the most commonly used carbon films are amorphous hydrogenated carbon, a-CH(x), it has been suggested that the thermal properties of amorphous fluorinated carbon films, a-CF(x), might be superior. This work has probed the interaction of small fluorinated ethers and alcohols with the surfaces of a-CF(x) films to understand the effects of carbon film fluorination on the interaction of the lubricant with its surface. Temperature-programmed desorption was used to measure the desorption energies of small fluorocarbons from the a-CF(x) surface and to compare their desorption energies with those from the surfaces of a-CH(x) films. These measurements reveal that, similarly to a-CH(x) films, a-CF(x) films expose a heterogeneous surface on which fluorocarbons adsorb at sites with a range of binding energies. The fluorocarbon ethers all have lower heats of adsorption than their hydrocarbon counterparts, suggesting that the ethers adsorb by donation of electron density from the oxygen lone-pair electrons to sites on the surface. Fluorinated alcohols have roughly the same heats of adsorption as their hydrocarbon counterparts. There is little significant difference between the interactions of fluorinated ethers (or alcohols) with the surfaces of either a-CF(x) or a-CH(x) films.     

Adsorption of carbon monoxide on Pd low‐index surfaces and (110) reconstructed surface

Adsorption and diffusion of carbon monoxide on Pd low‐index surfaces and missing‐row Pd (110) reconstructed surface have been investigated by the extended London–Eyring–Polyani–Sato (LEPS) method constructed by means of a five‐parameter Morse potential. All critical characteristics, such as adsorption site, adsorption geometry, binding energy, CO vibrational frequency have been obtained and compared with the experimental and theoretical data. On these surfaces, the stable adsorption sites of CO are changed with increasing CO coverage. On the missing‐row Pd (110) reconstructed surface, there are five stable adsorption sites: H₁, H₂ (H₁ and H₂ are threefold hollow sites on (111) subsurface), B (bridge site on the second layer), SB (short‐bridge site), and T (top site). Copyright © 2010 John Wiley & Sons, Ltd.     

The nature of NOx species on BaO(100): an ab initio molecular dynamics study

The dynamics of NO(x) species adsorbed on BaO(100) have been investigated with ab initio molecular dynamics simulations at a temperature of 300 degrees C. Nitrites are found to continuously interconvert between different adsorption configurations. For both nitrites and nitrates, diffusion events between anion sites are observed. These findings support the use of spillover mechanisms often postulated in mechanistic models of catalysts based on the NO(x)() storage and reduction concept. The large number of possible adsorption configurations are reflected in broad calculated vibrational signatures. These results explain the corresponding property observed in experimental infrared measurements of NO(x)() species on BaO. The dynamic response of the BaO(100) surface is found to strongly depend on the nature of the surface-adsorbate interaction. The largest distortions are predicted for nitrite adsorption.     

Vinyltrimethylsilane (VTMS) as a probe of chemical reactivity of a TiCN diffusion barrier-covered silicon surface

This paper presents the first molecular level investigation of chemical reactivity of a surface of an amorphous diffusion barrier film deposited on a Si(100)-2 x 1 single crystal. Vinyltrimethylsilane (VTMS) is chosen as a probe molecule because of its chemical properties and because of its role as a ligand in a common copper deposition precursor, hexafluoroacetylacetonato-copper-vinyltrimethylsilane, (hfac)Cu(VTMS). The surface chemistry of vinyltrimethylsilane on titanium carbonitride-covered Si(100)-2 x 1 has been investigated using multiple internal reflection Fourier transform infrared spectroscopy (MIR-FTIR), Auger electron spectroscopy (AES), thermal desorption mass spectrometry, and computational analysis. On a film with nominal surface stoichiometry TiC(x)N(y) (x approximately y approximately 1) preannealed to 800 K, VTMS adsorbs molecularly at cryogenic temperatures even at submonolayer coverages; the major pathway for its temperature-programmed evolution is desorption. Adsorption at room temperature leads to chemisorption via a double-bond attachment. A set of computational models was designed to investigate the possible adsorption sites for a VTMS molecule on a TiCN-covered Si(100)-2 x 1 surface. A comparison of the computational predictions for a variety of possible adsorption sites with the results of thermal desorption and infrared measurements suggests that approximately 90% of the adsorbed VTMS is chemisorbed along the Ti-C bond while approximately 10% is chemisorbed on a Ti corner atom, the minority site of the surface. The Ti-N bond is not participating in the chemisorption process.     

周期性密度泛函理论研究NO在CuCl(111)表面上的吸附

运用广义梯度密度泛函理论(GGA)的RPBE方法结合周期平板模型,在DNP基组下,研究了NO以N端和O端两种吸附取向在CuCl(111)表面上的吸附.通过对不同吸附位和不同覆盖度下的吸附能和几何构型参数的计算和比较发现:NO吸附在CuCl(111)表面Cu原子上的top位时为稳定的吸附;覆盖度为0.25 mL时吸附比较稳定;NO的N端吸附比O端吸附更有利,N端吸附时为化学吸附,O端吸附时为物理吸附.布居分析结果表明整个吸附体系发生了从Cu原子向NO分子的电荷转移,且O端吸附时电荷转移更多.N端吸附和O端吸附时,N-O键的伸缩振动频率均红移,同时O端吸附时红移更多.     

Two bonding configurations of acetylene on Si(001)-(2 x 1): a combined high-resolution electron energy loss spectroscopy and density functional theory study

Two coexisting adsorption states of molecularly adsorbed acetylene on the Si(001)-(2 x 1) surface have been identified by a combined study based on the high-resolution electron energy loss spectroscopy and density functional computations. Seven possible adsorbate-substrate structures are considered theoretically including their full vibrational analysis. Based on a significantly enhanced experimental resolution, the assignment of 15 C2H2- and C2D2-derived vibrational modes identifies a dominant di-sigma bonded molecule adsorbed on top of a single Si-Si dimer. Additionally there is clear evidence for a second minority species which is di-sigma bonded between two Si-Si dimers within the same dimer row (end-bridge geometry). The possible symmetries of the adsorbate complexes are discussed based on the specular and off-specular vibrational measurements. They suggest lower than ideal C(2v) and C(s) symmetries for on-top and end-bridge species, respectively. At low coverages the symmetry reductions might be lifted.     

Adsorption and assembly of copper phthalocyanine on cross-linked TiO2(110)-(1 x 2) and TiO2(210)

Copper phthalocyanine (CuPc) on reconstructed rutile TiO(2) was studied with ultrahigh vacuum variable temperature scanning tunneling microscopy. On cross-linked TiO(2)(110)-(1 x 2), the CuPc molecules at low coverages sparsely lay flat at the link sites and tilted in troughs between [001] rows. Increase of the CuPc coverage led to the trapping of the CuPc molecules by the rectangular surface cells fenced by the oxygen columns along the [001] direction and the cross-link rows. Each cell could trap one CuPc molecule at intermediate coverages and two CuPc molecules at higher coverages. On TiO(2)(210), the CuPc molecules tilted in defect-free areas and lay at defect sites with their molecular planes parallel to the substrate surface. Further increase of the CuPc coverage induced the formation of one- and two-dimensional assemblies on TiO(2)(210).