Correlation between electron capture negative chemical ionization mass spectrometric fragmentation and calculated internal energies for polychlorinated biphenyls

Correlationbse tween molecular structure and fragmentation observed in electron capture negative chemical ionization mass spectra (moderator gas = methane) of 49 selected tetrachlorinated, pentachlorinated, and hexachlorinated biphenyls have been investigated by using molecular modeling. The semiempirical general molecular orbital program MOPAC was used to calculate molecular properties for biphenyl and the 209 polychlorinated biphenyls. The mass spectrometric ionization and fragmentation processes were found to be linked to the number of chlorine atoms present on the biphenyl, and to the number of those chlorine atoms in the ortho (2, 2′, 6, and 6′) positions. The intensity of molecular ions increased with the number of chlorine atoms present, but this was counteracted by enhanced fragmentation as the number of ortho position chlorine atoms increased. The molecular parameters that were most closely linked with the number of ortho chlorine atoms were the twist angle between the phenyl rings and the energy of the lowest unoccupied molecular orbital (LUMO). It is suggested that fragmentation occurs when the energy of the ionizing electron exceeds the energy difference between the LUMO and LlJMO + 1 orbitals.     

Laser Desorption electron impact mass spectrometry: Studies of ion radical fragmentation mechanisms and hydrogen/deuterium rearrangement in time-resolved experiments

Laser desorption of neutral molecules followed by electron impact ionization is shown to produce gaseous ion radicals that undergo fragmentation analogous to that observed with electron impact and field ionization. Spectra were measured of heptanal and four deuterium-labeled analogs regenerated from bisulfite derivatives, and compared with electron impact, chemical ionization and field ionization spectra published previously. Lifetimes of desorbed neutral molecules and of ions were found to influence the fragmentation process as reflected in isotope patterns. This is explained on the basis of internal energies.     

The investigation of substituent effects on the fragmentation pathways of pentacoordinated phenoxyspirophosphoranes by ESI‐MSn

The fragmentation pathways of pentacoordinated phenoxyspirophosphoranes were investigated in the positive mode by electrospray ionization multistage mass spectrometry. The results demonstrate that the sodium adducts of the title compounds undergo two competitive fragmentation pathways, and the fragmentation patterns are heavily dependent on the various substituent patterns at the phenolic group. An electron‐withdrawing substituent at the ortho‐position always results in the removal of a corresponding phenol analogue, while cleavage by spiroring opening becomes the predominant fragmentation pathway if an electron‐donating substituent is at the phenolic group. The substituent effects on the competitive fragmentation pathways were further elucidated by theoretical calculations, single crystal structure analysis, and high‐resolution mass spectrometry. The results contribute to the understanding of the gas‐phase fragmentation reactions and the structure identification of spirophosphorane analogues by electrospray ionization multistage mass spectrometry.     

Mass Spectral Fragmentation of (S,S)-N,N′-Bis [1-(hydroxymethyl)alkyl]anthracene/Naphthalene-1,8-dicarboxamides under Electron Impact Ionization Conditions

The mass spectrometric fragmentation of(S,S)-N,N′-bis[1-(hydroxymethyl)alkyl]anthracene/naphthalene-1,8-dicarboxamides was investigated with the aid of mass-analyzed ion kinetic energy spectrometry and the elemental compositions of important fragment ions were determined by accurate mass measurement under electron impact ionization conditions. All the compounds could eliminate formaldehyde. The [M-CH2O] ions could also eliminate imine, aziridine, aziridinone,2-amonoalkan-1-ol, water, and other fragments. Several cyclizations were observed under electron impact ionization.     

FTIR analysis of dimethyl ether decomposition products following charge transfer ionization with Ar+ under matrix isolation conditions

Fourier transform infrared spectroscopic analysis has been performed on argon matrices formed following electron bombardment of argon/dimethyl ether mixtures. Products consistent with the ionization and subsequent fragmentation of dimethyl ether cation have been observed. Following ionization of dimethyl ether, fragmentation occurs that is consistent with ionization energy greater than 15 eV due to efficient charge transfer from dimethyl ether to Ar(+) as the major ionization process. Major products observed in the infrared spectra are methane, formaldehyde, HCO(*), CO, and Ar(2)H(+). These products are consistent with the known fragmentation of photoionized dimethyl ether in a 15-16 eV ionization energy range. However, the observation of dehydrogenated products is consistent with additional abstraction of hydrogen from proximally located species isolated within the matrix. Analogous experiments employing CD(3)OCH(3) give similar results, and the observed isotopically substituted products are consistent with the proposed fragmentation pathways.     

Effects of polarization of 1.4 microm femtosecond laser pulses on the formation and fragmentation of naphthalene molecular ions compared at the same effective ionization intensity

Naphthalene was ionized with 130 fs pulses of different polarizations at 1.4 microm. In contrast to the results of ionization by 0.8 microm pulses, fragmentation was dramatically suppressed and naphthalene molecular ions of up to 3+ were produced. The use of this simple model of ionization and large electron kinetic energy enabled us to study the electron-recollision-induced fragmentation and/or double ionization more precisely. The failure of the theoretical prediction of ion yield for the case of naphthalene prevented us from judging the electron recollision solely by a comparison with theoretical curves. Therefore, the effects of laser polarization on the ratios between differently charged states and between molecular and total ions were compared at the same effective (peak) intensity instead of average intensity. Comparison under the same effective intensity enabled us to identify the effects of ellipticity clearly. Evidence of the electron recollision was found in the doubly charged molecular ion formation but not in the fragmentation. The single-electron recollision event was not sufficient to induce fragmentation because of its low energy transfer efficiency. We concluded that the fragmentation originated in the unstable nature of the highly charged molecular ion itself and in the Coulomb explosion in the case of naphthalene.     

Interpretation of alkyl diselenide and selenosulfenate mass spectra

The mass spectral fragmentation of aliphatic diselenides and selenosulfenates is analyzed to gain a better understanding of the behavior of these species. The main fragmentation pathways of these species include the fragmentation along the Se-C bond, fragmentation along the Se-Se or Se-S bonds and intra-molecular rearrangements. In general, negative ionization favors the fragmentation along the Se-Se or Se-S bonds while positive ionization leads to stable molecular ions. Density functional theory calculations of bond dissociation energies and molecular orbital analysis was undertaken to explain the observed trends in molecular fragmentation. Besides the analysis of molecular fragmentation, a phenomenon of molecular association in negative electron impact and positive chemical ionization conditions was observed and investigated using a high resolution time-of-flight mass spectrometer. Molecular association that occurs during the ionization of species includes the formation of symmetrical diselenides from asymmetrical selenosulfenates and formation of alkylseleno adducts from the corresponding diselenides. For species which is hard to resolve by mass analysis, such as isobars of CHSe, CH₂Se, and CH₃Se, the isotope pattern superimposition procedure was applied to define the overlapping clusters.     

Mass Spectral Fragmentation of （S, S）-N,N＇-Bis [1-（hydroxymethyl） alkyl ] anthracene/Naphthalene-1, 8-dicarboxamides under Electron Impact Ionization Conditions

The mass spectrometric fragmentation of （ S, S） -N, N＇-bis [ 1- （hydroxymethyl） alkyl] anthracene/naphthalene-1, 8-dicarboxamides was investigated with the aid of mass-analyzed ion kinetic energy spectrometry and the elemental compositions of important fragment ions were determined by accurate mass measurement under electron impact ionization conditions. All the compounds could eliminate formaldehyde. The [ M-CH2O] ions could also eliminate imine, aziridine, aziridinone, 2-amonoalkan-1-ol, water, and other fragments. Several cyclizations were observed under electron impact ionization.     

The even-electron rule in electrospray mass spectra of pesticides

A study of the fragmentation and ion formation of three major families of pesticides (including herbicides, insecticides, and fungicides) by liquid chromatography/time-of-flight mass spectrometry (LC/TOF-MS) and liquid chromatography/quadrupole time-of-flight mass spectrometry (LC/Q-TOF-MS) was carried out using positive electrospray ionization (ESI) and the results compared with those by gas chromatography (GC)/TOF-MS with electron ionization (EI) in order to test the validity of the even-electron rule in electrospray ionization. First, the majority of the fragmentations by positive ion ESI were even electron (EE) ions (93% of the fragment ions). Secondly, the formation of odd-electron (OE) fragment ions was greater with EI, where the fragment ions were present in a ratio of approximately 1:2 (35% OE ions and 65% EE ions). Thirdly, in-source collision-induced dissociation (CID) fragmentation by LC/TOF-MS and CID fragmentation in the collision cell by LC/Q-TOF-MS/MS resulted in 95% of the fragment ions being identical between the two types of fragmentation. As ESI in the positive ion mode yields an EE precursor ion (normally a protonated molecule), this commonly leads to EE fragment ions by elimination of molecules - a process called the even-electron rule. Neutral radical losses were less common in ESI but were common in the EI spectra of the same compounds. The structures that did lead to OE ions in ESI (exceptions to the even-electron rule approximately 7% of all ESI ions) favored electronegative radical losses in approximately the following order: .SO(2)CH(3), .NO(2), .CH(3), .Cl, .SCH(3), .CH(2)CH, and .OH.     

Mass spectra of new substituted 2-amino-4H-pyrans: a retro-Diels-Alder reaction pattern

New substituted 2-amino-3-cyano-4H-pyrans have been studied by electron ionization (EI), chemical ionization (CI) and electrospray ionization (ESI) mass spectrometry. The retro-Diels-Alder reaction (RDA) is the main fragmentation pattern observed in the EI spectra forming an unsaturated ketone as the diene fragment. In contrast, a different RDA reaction takes place yielding an unsaturated amide as diene fragment together with the unsaturated ketone in the CI spectra. The MS/MS spectra obtained using an ESI source reveal that the favoured fragmentation by collision induced dissociation (CID) is the elimination of the substituent at the C4 position with formation of a stable pyrilium cation.     

Characterization of isomeric allylic diols resulting from chlorophyll phytyl side-chain photo- and autoxidation by electron ionization gas chromatography/mass spectrometry

The electron ionization (EI) mass spectral fragmentation of the trimethylsilyl derivatives of 3-methylidene-7,11,15-trimethylhexadecane-1,2-diol, Z- and E-3,7,11,15-tetramethylhexadec-3-ene-1,2-diols and Z- and E-3,7,11,15-tetramethylhexadec-2-ene-1,4-diols resulting from chlorophyll phytyl side-chain photo- and autoxidation was investigated. Different pathways (substantiated by deuterium labelling) were proposed in order to explain the main fragmentation observed. Then, some sufficiently specific fragment ions were selected and used to characterize these compounds in natural environmental samples.     

Synthesis and electron impact mass spectra of 3-substituted 2-acylaminoindazoles

3-Substituted-2-acylaminoindazoles 2 were prepared via oxidative cyclization of o-aminoaryl ketone acylhydrazones 1 with iodosobenzene diacetate. Their electron ionization mass spectra were recorded and in addition to the molecular ions show common fragmentation pathways corresponding to the [M-N₂]⁺, [M-NHCOX]⁺ and [M-COX]⁺ ions, with some influence on the skeletal fragmentation by different substituents.     

Mass spectrometric behavior of levoglucosan under different ionization conditions and implications for studies of cellulose pyrolysis

Pyrolysis-mass spectrometric studies of cellulose indicate low abundances of levoglucosan in the product spectrum compared to the yield values determined in more conventional types of pyrolysis studies. To examine the reason for these conflicting observation, levoglucosan was examined under different ion source conditions and ionization modes to ascertain the relative contributions of thermal degradation and ionization fragmention to the low abundances of the levoglucosan molecular ion. Low-energy electron ionization using conventional sample volatilization and molecular-beam sampling is compared to chemical ionization using methane, isobutane, and ammonia as reagent gases, and to field ionization and desorption. The mass spectrometric fragmentation patterns under the various systems indicate that studies of cellulose pyrolysis underestimate the amount of levoglucosan formed due to ionization fragmentation and thermal rearrangement reactions in the ion source. Several peaks, including m/z 126 and 144, are dominated by the contribution from the fragmentation of levoglucosan.     

Fragmentation reactions of singly and doubly protonated thiourea- and sugar-substituted cyclams and their transition-metal complexes

Cyclam macrocycles tetrasubstituted with amino-, thiourea-, and sugar-terminated side chains are ionized by electrospray ionization mass spectrometry (ESI-MS) as singly or doubly protonated species or as transition-metal complexes. Their fragmentation behavior is examined in a Fourier-transform ion-cyclotron-resonance (FT-ICR) mass spectrometer by collision-induced dissociation (CID) experiments. Typically, fragmentation occurs within the side chains through a number of different 1,2-elimination reactions irrespective of the absence or presence of a transition metal ion such as Co(2+), Ni(2+), or Zn(2+). A remarkable exception is Cu(2+), which induces ring cleavage reactions. This is traced back to an electron transfer from the cyclam nitrogen atoms to the Cu(2+) ion. The electron transfer creates a cation-radical within the macrocycle, which induces typical fragmentation reactions such as alpha-cleavages that lead to fragmentation within the macrocycle. This interpretation is in line with fragmentation experiments on unsubstituted cyclam and its complexes.     

Electron ionization and chemical ionization fragmentation of o/p isomers of bisphenol-A with tandem mass spectrometry

The fragmentation of o/p isomers of bisphenol-A was examined by using collisionally activated decomposition and the tanden mass spectrometric techniques. Also chemical ionization was performed using methane, isobutane and ammonia. The o/p position of the hydroxy groups in the bisphenol-A molecule directed the fragmentation both in electron and chemical ionization.     

Mass spectral fragmentation patterns of heterocycles. IV . Tetracyclic phenothiazines. IX. Electron impact promoted mass spectral fragmentation of pyrrolo[3,2,1-kl]phenothiazine

The mass spectral fragmentation patterns of pyrrolo[3, 2, 1-kl]phenothiazine ( 1 ) and its 1, 10-dideuterioderi-vative [2] are reported. The site of deuterium substitution in 2 was established by examination of its ¹³C nuclear magnetic resonance spectrum. The heteroaromatic stability of 1 to electron impact is exemplified by the occurrence of the molecular ion as the base peak and the formation of a reasonably intense M²⁺ ion. An intense M-1 ion is also observed. The more abundant fragment ions appear to result from sulfur ionization. Fragment ions arising from ionization of the nitrogen constitute only a small fraction of the total ion current. Proposed fragmentation pathways of 1 are supported by the detection of appropriate metastable ions, exact mass measurements, and electron impact spectrum of 2 .     

The fragmentation behavior of differently substituted 2-amino-1,3,4-benzotriazepines

The mass spectra of eighteen 2-amino-1,3,4-benzotriazepines were recorded under electron ionization, and the fragmentation patterns were elucidated by metastable ion analysis and exact mass measurements. The most typical fragmentations were ring contraction reactions with the loss of nitrogen atoms at positions 3 and 4. Extensive rearrangement reactions took place as well. In these the substituted 2-amino group played an important role. Isomeric compounds were easily distinguished.     

The reactive states of ions: Antiaromatic seven-membered N-substituted-1H-azepines and isomeric aromatic substrates

Comparison of the electron impact and chemical ionization mass spectra of N-substituted-1H-azepines and isomeric aromatic substrates reveals significant differences. The data indicate that the substituted azepincs examined are stable to electron impact at low temperatures and retain their antiaromatic 8π electron seven-membered cyclic system prior to their fragmentation. The electron impact data are supported by low electron-volt and metastable scan techniques. Electron impact or chemical ionization induced transformation of azepines to aromatic substrates similar to the thermal transformation of neutral analogues is not observed at low temperatures. Chemical ionization mass spectra of N-ethoxycarbonyl-1H-azepines and N-phenylcarbamates were complicated owing to thermal decomposition reactions at high temperatures.     

药物泰瑞沙的质谱分析及其未知杂质的结构解析

利用气相色谱-质谱法在电子电离源下对用于治疗肺癌的药物泰瑞沙(Tagrisso)进行分析,对主成分奥斯替尼(Osimertinib)在质谱中产生的主要的碎片离子进行归属,推测其可能的质谱裂解途径。参考主成分奥斯替尼的质谱裂解方式,由质谱裂解机理的角度出发对该药物中的4个未知的关键杂质的结构进行有效解析。此外,发现奥斯替尼及其个别杂质在质谱裂解过程中出现了显著的违背偶电子规则的碎片离子。通过对药物泰瑞沙的质谱分析期望能够提供一些分析、解析药物中未知杂质的思路和方法。     

Electron impact and chemical ionization mass spectra of nitro-substituted polyfunctional isomers

The electron impact and methane and ammonia chemical ionization mass spectra of some selected nitro-substituted isomeric benzalacetophenones, benzyl ketones and aromatic epoxides have been examined. The isomeric pairs show significant differences in the electron impact and chemical ionization spectra. The EI spectra show cleavage α to the carbonyl as the major fragmentation mode. Under CI conditions subtle differences in the fragmentation modes of isomeric pairs are more enhanced, and elimination reactions are more favoured in the o-nitro-substituted compounds than in the para isomers.