Diels-Alder topochemistry via charge-transfer crystals: novel (thermal) single-crystal-to-single-crystal transformations

The solid-state [4+2] cycloaddition of anthracene to bis(N-ethylimino)-1,4-dithiin occurs via a unique single-phase topochemical reaction in the intermolecular (1:1) charge-transfer crystal. The thermal heteromolecular solid-state condensation involves the entire crystal, and this rare crystalline event follows topochemical control during the entire cycloaddition. As a result, a new crystalline modification of the Diels-Alder product is formed with a crystal-packing similar to that of the starting charge-transfer crystal but very different from that of the (thermodynamically favored) product modification obtained from solution-phase crystallization. Such a single-phase transformation is readily monitored by X-ray crystallography at various conversion stages, and the temporal changes in crystallographic parameters are correlated with temperature-dependent (solid-state) kinetic data that are obtained by 1H NMR spectroscopy at various reaction times. Thus, an acceleration of the solid-state reaction over time is found which results from a progressive lowering of the activation barrier for cycloaddition in a single crystal as it slowly and homogeneously converts from the reactant to the product lattice.     

Topochemical Polymerization of 1,3‐Diene Monomers and Features of Polymer Crystals as Organic Intercalation Materials

From the viewpoint of controlled polymer synthesis, topochemical polymerization based on crystal engineering is very useful for controlling not only the primary chain structures but also the higher‐order structures of the crystalline polymers. We found a new type of topochemical polymerization of muconic and sorbic acid derivatives to give stereoregular and high‐molecular weight polymers under photo‐, X‐ray, and γ‐ray irradiation of the monomer crystals. In this article, we describe detailed features and the mechanism of the topochemical polymerization of diethyl‐(Z,Z)‐muconate as well as of various alkylammonium derivatives of muconic and sorbic acids, which are 1,3‐diene mono‐ and dicarboxylic acid derivatives, to control the stereochemical structures of the polymers. The polymerization reactivity of these monomers in the crystalline state and the stereochemical structure of the polymers produced are discussed based on the concept of crystal engineering, which is a useful method to design and control the reactivity, structure, and properties of organic solids. The reactivity of the topochemical polymerization is determined by the monomer crystal structure, i.e. the monomer molecular arrangement in the crystals. Polymer crystals derived from topochemical polymerization have a high potential as new organic crystalline materials for various applications. Organic intercalation using the polymer crystals prepared from alkylammonium muconates and sorbates is also described.     

Single-crystal-to-single-crystal synthesis of a pseudostarch via topochemical azide–alkyne cycloaddition polymerization

There is high demand for polysaccharide-mimics as enzyme-stable substitutes for polysaccharides for various applications. Circumventing the problems associated with the solution-phase synthesis of such polymers, we report here the synthesis of a crystalline polysaccharide-mimic by topochemical polymerization. By crystal engineering, we designed a topochemically reactive crystal of a glucose-mimicking monomer decorated with azide and alkyne units. In the crystal, the monomers arrange in head-to-tail fashion with their azide and alkyne groups in a ready-to-react antiparallel geometry, suitable for their topochemical azide–alkyne cycloaddition (TAAC) reaction. On heating the crystals, these pre-organized monomer molecules undergo regiospecific TAAC polymerization, yielding 1,4-triazolyl-linked pseudopolysaccharide (pseudostarch) in a single-crystal-to-single-crystal manner. This crystalline pseudostarch shows better thermal stability than its amorphous form and many natural polysaccharides.

Prudent crystal engineering allows head-to-tail arrangement of inositol monomer molecules pre-organizing azide and alkyne units of adjacent monomers in a ready-to-react manner. On heating regiospecific SCSC polymerization yields a starch-like polymer.     

Crystal‐to‐Crystal Synthesis of Helically Ordered Polymers of Trehalose by Topochemical Polymerization

The synthesis of crystalline helical polymers of trehalose via topochemical azide–alkyne cycloaddition (TAAC) of a trehalose‐based monomer is presented. An unsymmetrical trehalose derivative having azide and alkyne crystallizes in two different forms having almost similar packing. Upon heating, both the crystals undergo TAAC reaction to form crystalline polymers. Powder X‐ray diffraction (PXRD) studies revealed that the monomers in both the crystals polymerize in a crystal‐to‐crystal fashion; circular dichroism (CD) studies of the product crystals revealed that the formed polymer is helically ordered. This solvent‐free, catalyst‐free polymerization method that eliminates the tedious purification of the polymeric product exemplifies the advantage of topochemical polymerization reaction over traditional solution‐phase polymerization.     

Trifluoromethyl groups in crystal design of 1,4-diphenyl-1,3-butadienes for topochemical [2 + 2] photodimerization

[structure: see text] UV irradiation of the powdered crystalline sample of each of three (E,E)-1,4-di(trifluoromethyl-substituted)phenyl-1,3-butadienes (1-3) was found to yield a single [2 + 2] cycloaddition product in the solid state. Moreover, upon irradiation, the crystalline samples of two (E,E)-1,4-di(trifluoromethyl- and fluorine-substituted)phenyl-1,3-butadienes (4, 5) undergo a similar conversion to afford a [2 + 2] cycloaddition product, respectively. Our observations suggest that trifluoromethyl groups can be used to direct 1,4-diphenyl-1,3-butadiene molecules to form a parallel, offset-stacked orientation suitable for topochemical [2 + 2] cycloaddition.     

Elastic Organic Crystals of a Fluorescent π‐Conjugated Molecule

An elastic organic crystal of a π‐conjugated molecule has been fabricated. A large fluorescent single crystal of 1,4‐bis[2‐(4‐methylthienyl)]‐2,3,5,6‐tetrafluorobenzene (over 1 cm long) exhibited a fibril lamella morphology based on slip‐stacked molecular wires, and it was found to be a remarkably elastic crystalline material. The straight crystal was capable of bending more than 180° under applied stress and then quickly reverted to its original shape upon relaxation. In addition, the fluorescence quantum yield of the crystal was about twice that of the compound in THF solution. Mechanical bending–relaxation resulted in reversible change of the morphology and fluorescence. This research offers a more general approach to flexible crystals as a promising new family of organic semiconducting materials.     

Polymorphism-dependent fluorescence of 9,10-bis(pentafluorobenzoyloxy)anthracene

Anthracene derivatives possessing pentafluorobenzoyloxy moieties at 9- and 10-positions showed polymorphism affording two types of fluorescent crystals with blue and bluish green fluorescence in their crystalline state, respectively. Their single crystal X-ray structures showed that the degree of overlap of anthracene moieties was responsible for the difference in fluorescence. Fluorescence in the crystalline state originated in the dimer emission deduced from their excitation spectra.     

Different rearrangement behaviour of the cation or anion derived from the Diels-Alder adduct of 9-ferrocenylanthracene and 1,4-benzoquinone: ring-opening or paddlewheel formation

Prototropic rearrangement of the Diels-Alder adduct (3a) of 9-ferrocenylanthracene and 1,4-benzoquinone potentially furnishes 9-ferrocenyl-1,4-dihydroxytriptycene (3b) incorporating a C(2v) symmetrical paddlewheel moiety. However, reaction of 3a with HBF(4) unexpectedly yields instead 9-ferrocenyl-10-(2,5-dihydroxyphenyl)anthracene (4) via cleavage of the C9-C12 bond to generate initially a ferrocenyl-stabilized cation. Treatment of 3a with sodium hydride and iodomethane yields 1,4-dimethoxy-9-ferrocenyltriptycene (3c) in high yield but, surprisingly, also leads to fission of the C9-C12 bond resulting, after methylation, in the formation of 9-hydroxy-9-ferrocenyl-10-(2-hydroxy-5-methoxyphenyl)dihydroanthracene (12), which readily dehydrates on silica to form 9-ferrocenyl-10-(2-hydroxy-5-methoxyphenyl)anthracene (8). The X-ray crystal structures of 3a, 3c and 4 are reported.     

Comparison of Templating Abilities of Urea and Thioruea During Photodimerization of Bipyridylethyelene and Stilbazole Crystals

Photodimerization of cocrystals of four bispyridylethylenes and two stilbazoles with urea as a template in the solid state has been investigated following our success with thiourea. Four investigated olefins photodimerized quantitatively to a single dimer in the crystalline state only. The reactivity of urea–olefin crystals is understood on the basis of their packing arrangements in the crystalline state. In reactive crystals the adjacent reactive molecules are within 4.2 Å and parallel, whereas the unreactive ones have their adjacent molecules are farther than 4.6Å and nonparallel. Thus, with the knowledge of crystal packing the reactivity of urea–olefin crystals is predictable on the basis of Schmidt's topochemical postulates. The templating property of urea, similar to thiourea, derives from its ability to form hydrogen bonds with itself and the guest olefins. Despite the similarities in molecular structures of urea and thiourea their subtle electronic properties, yet to be fully understood, affect the crystal packing and consequently their reactivity in the crystalline state. Further work is needed to fully exploit the templating properties of urea.     

Solution‐Grown Organic Single‐Crystalline Donor–Acceptor Heterojunctions for Photovoltaics

Organic single crystals are ideal candidates for high‐performance photovoltaics due to their high charge mobility and long exciton diffusion length; however, they have not been largely considered for photovoltaics due to the practical difficulty in making a heterojunction between donor and acceptor single crystals. Here, we demonstrate that extended single‐crystalline heterojunctions with a consistent donor‐top and acceptor‐bottom structure throughout the substrate can be simply obtained from a mixed solution of C₆₀ (acceptor) and 3,6‐bis(5‐(4‐n‐butylphenyl)thiophene‐2‐yl)‐2,5‐bis(2‐ethylhexyl)pyrrolo[3,4‐c]pyrrole‐1,4‐dione (donor). 46 photovoltaic devices were studied with the power conversion efficiency of (0.255±0.095) % under 1 sun, which is significantly higher than the previously reported value for a vapor‐grown organic single‐crystalline donor–acceptor heterojunction (0.007 %). As such, this work opens a practical avenue for the study of organic photovoltaics based on single crystals.     

Crystal engineering for topochemical polymerization of muconic esters using halogen-halogen and CH/pi interactions as weak intermolecular interactions

We now report the molecular and crystal structure design of muconic ester derivatives on the basis of crystal engineering using halogen-halogen contacts and CH/pi interactions. The solid-state photoreaction pathway of the dibenzyl (Z,Z)-muconates as the 1,3-diene dicarboxylic acid monomers depends on the structure of the ester groups. The substitution of a halogen atom for the aromatic hydrogen of a benzyl group induces topochemical polymerization to produce stereoregular polymers in a crystalline form, whereas the unsubstituted benzyl derivative isomerizes to yield the corresponding E,E isomer under similar conditions. The topochemical polymerization process is directly confirmed by the fact that the single-crystal structures before and after the polymerization are very similar to each other. From the crystal structure analysis for a series of substituted benzyl (Z,Z)- and (E,E)-muconates, it has been revealed that the planar diene moieties are closely packed to form a columnar structure in the crystals. The stacking of the polymerizable monomers is characterized by a stacking distance of 4.9-5.2 A along the columns. This structure is supported by a halogen-halogen interaction between the chlorine or bromine atoms introduced at the p position of the benzyl groups in addition to an aromatic stacking due to the CH/pi interaction between the benzylic methylene hydrogens and aromatic rings. The design of a monomer packing corresponds to the type and position of the introduced halogen atom and also the polymorphs. To make a stacking distance of 5 A using both halogen-halogen and CH/pi interactions as supramolecular synthons is important for the molecular design of muconic ester derivatives appropriate for topochemical polymerization.     

Mechanical relaxations in trans-1,4-polyisoprene crystals

Dynamic mechanical relaxation spectra were obtained for solution-grown crystals of trans-1,4-polyisoprene (TPI) in the α and β form. For single crystal mats three relaxations were observed. The highest temperature relaxation peak was characterized as due to the crystalline regions, whereas the intermediate peak was assigned to the primary amorphous relaxation which originates from the fold regions. The nature of the amorphous regions was elucidated by examining the effect of epoxidation on the lamellar fold surface. For an epoxidized single crystal mat, the intermediate relaxation maximum shifted to a higher temperature which corresponds to the glass transition of the almost completely epoxidized TPI. These results are discussed in terms of the fold structure of the TPI single crystals.     

Molecular structures and packing arrangements of five 2,5-bis(aryl-2-vinyl)-1,4-dimethoxybenzene derivatives

The crystal and molecular structures of five 2,5-bis(aryl-2-vinyl)-1,4-dimethoxybenzene derivatives1a-1e were determined by X-ray diffraction with respect to topochemical aspects. We found three types of packing arrangements: (1)-type packing with 7 Å stacking axes, (2)-type packing with 4 Å stacking axes and (3) a third intermediate packing type. The intermolecular distances between the vinylic double bonds of all derivatives exceed the limits of 4 Å in the crystals. Therefore photochemical [2+2]cycloadditions were not observed in the crystals of these compounds. A correlation between the inclination angle of the molecular plane to the stacking axis and the separation between potentially reactive double bonds was detected.     

Synthesis and polymerization of the four 1,3-di(cyano and/or carbomethoxy)-substituted butadienes

The four 1,3-di(cyano and/or carbomethoxy)-substituted butadienes were synthesized. Their cyclopentadiene adduct precursors and, in one case, an anthracene adduct precursor were synthesized and pyrolyzed at 400–600°C (0.1–1.0 mm) to yield the four new dienes. Two crystalline precursors gave crystalline dienes 1,3-dicyano-1,3-butadiene, mp 79°C, and 1-carbomethoxy-3-cyanobutadiene, mp 45–46°C, in modest yields in small-scale experiments, which were completely characterized by elemental analyses and spectra. The other two liquid precursors produced no isolable or detectable dienes but led directly to polymer. The two crystalline dienes were exceptionally reactive, polymerizing on storage or when deliberately initiated with AIBN, but were moderately stable in solution. All polymers possessed the trans-1,4-structure exclusively. Because of the favorable location of the electronegative substituents for stabilizing the growing radical, these new dienes are the most reactive di-electronegatively substituted butadienes described.     

Crystal-to-Crystal Synthesis of Helically Ordered Polymers of Trehalose by Topochemical Polymerization

The synthesis of crystalline helical polymers of trehalose via topochemical azide–alkyne cycloaddition (TAAC) of a trehalose-based monomer is presented. An unsymmetrical trehalose derivative having azide and alkyne crystallizes in two different forms having almost similar packing. Upon heating, both the crystals undergo TAAC reaction to form crystalline polymers. Powder X-ray diffraction (PXRD) studies revealed that the monomers in both the crystals polymerize in a crystal-to-crystal fashion; circular dichroism (CD) studies of the product crystals revealed that the formed polymer is helically ordered. This solvent-free, catalyst-free polymerization method that eliminates the tedious purification of the polymeric product exemplifies the advantage of topochemical polymerization reaction over traditional solution-phase polymerization.     

Preparation of conjugated polymeric columns with a hexagonal symmetry from star-shaped supramolecular liquid crystals

New conjugated polymeric columns with a hexagonal symmetry were prepared via topochemical polymerisation of star-shaped supramolecular liquid crystals formed by hydrogen bonding between a phloroglucinol core and pyridine derivatives containing a diacetylenic group in the alkyl chain. The mesomorphic properties of the supramolecular monomer and its photopolymerisation behaviour were investigated. The supramolecular liquid crystal exhibited a rectangular columnar mesophase. Photopolymerisation of supramolecular monomer along the column axis in the liquid crystalline state provided well-ordered conjugated polydiacetylenic columns with a two-dimensional hexagonal symmetry. Fourier transform infrared and ultraviolet–visible spectroscopy affirmed that conjugated polydiacetylenes were produced by 1,4-polymerisation of the supramolecular monomer along the column axis. X-ray diffraction analysis showed that a two-dimensional columnar order in the supramolecular monomer was maintained after photopolymerisation, and that the resulting polydiacetylene had a hexagonal array of conjugated columns. Our controlled methodology provides a new route to conjugated polymeric columns with highly ordered structures by self-assembly and polymerisation of star-shaped supramolecular liquid crystals.     

Efficient preparation of monoadducts of [60] fullerene and anthracenes by solution chemistry and their thermolytic decomposition in the solid state

The efficient preparation of monoadducts of [60]fullerene and seven anthracenes (anthracene, 1-methylanthracene, 2-methylanthracene, 9-methylanthracene, 9,10-dimethylanthracene, 2,3,6,7-tetramethylanthracene, and 2,6-di-tert-butylanthracene) by cycloaddition in solution is described. The seven mono-adducts of [60]fullerene and the anthracenes were characterized spectroscopically and were obtained in good yields as crystalline solids. The monoadducts of [60]fullerene and anthracene, 1-methylanthracene, 2-methylanthracene and 9,10-dimethylanthracene crystallized directly from the reaction mixture. The thermolytic decomposition at 180 degrees C of the crystalline monoadducts of [60]fullerene and anthracene, 1-methylanthracene, 9-methylanthracene and 9,10-dimethylanthracene all gave rise to the specific formation of a roughly 1:1 mixture of [60]fullerene and the corresponding antipodal bisadducts ("trans-1"-bisadducts) of [60]fullerene and the anthracenes. In contrast, the crystalline monoadducts of [60]fullerene and the anthracene derivatives 2-methylanthracene, 2,3,6,7-tetramethylanthracene and 2,6-di-tert-butylanthracene all decomposed to [60]fullerene and anthracenes (without detectable formation of bisadducts) upon heating in the solid state to temperatures of 180 to 240 degrees C. The formation of the antipodal bisadducts from thermolytic decomposition of crystalline samples of the monoadducts was rationalized by topochemical control.     

Molecular compasses and gyroscopes with polar rotors: synthesis and characterization of crystalline forms

We report the highly convergent synthesis and solid-state characterization of six crystalline "molecular compasses" consisting of a central phenylene rotor with polar substituents, or compass needle, and two trityl groups axially connected by acetylene linkages to the 1,4-positions. Compounds with fluoro-, cyano-, nitro-, amino-, diamino-, and nitroamino substituents are expected to emulate the parent compound which was shown to form crystals where the central phenylene can rotate about its 1,4-axis with rate constants in the 10(3) -10(6) s(-)(1) dynamic ranges near ambient temperature, depending on crystal morphology. With data from single-crystal X-ray diffraction analysis, solid-state CPMAS (13)C NMR, differential scanning calorimetry (DSC), and thermogravimetric analysis (TGA), it is shown that a relatively small structural perturbation by a single polar group (F, CN, NO(2), NH(2)) results in isomorphous structures with analogous properties. In analogy to the parent compound, crystals grown from benzene formed clathrate structures in the space group Ponemacr; with one molecular compass and two benzene molecules per unit cell. Solvent-free crystals with the same space group obtained by a first-order phase transition between 60 and 130 degrees C were shown to be spectroscopically identical to those obtained by slow solvent evaporation from a mixture of CH(2)Cl(2) and hexanes. A qualitative analysis of the positionally disordered phenylene groups in terms of the expected solid-state rotational dynamics suggests a nonsymmetric, 2-fold rotational potential, or a process involving full 360 degrees turns.     

Fabrication of Large Single Crystals for Platinum‐Based Linear Polymers with Controlled‐Release and Photoactuator Performance

Preparation of large single crystals of linear polymers for X‐ray analysis is very challenging. Herein, we employ a coordination‐driven self‐assembly strategy to secure the appropriate head‐to‐tail alignment of anthracene moieties, and for the first time obtained large‐sized Pt‐based linear polymer crystals through a [4+4] cycloaddition of anthracene in a single‐crystal to single‐crystal fashion. Using X‐ray diffraction to determine the polymer crystal structure, we found that both the polymerisation and depolymerisation steps proceed via a stable intermediate. Taking advantage of the temperature‐dependent slow depolymerization, the Pt‐based linear polymer showed potential as a sustained release anticancer drug platform. Utilizing the reversible contraction effect of unit‐cell volume upon irradiation or heating, the stimuli‐responsive crystals were hybridized with polyvinylidene fluoride to obtain a “smart material” with outstanding photoactuator performance.     

Enzymatic esterification of bicyclic meso-diols derived from 1,4-bis(hydroxymethyl)furan. An enantioselective Diels–Alder reaction equivalent

meso-Diols derived from the Diels–Alder adduct 1,4-bis(hydroxymethyl)furan/dimethyl acetylenedicarboxylate can be enantioselectively monoacetylated under CRL or PSL catalysis with very good yields and moderate to excellent ees. (+)-Monoacetates are always preferentially formed in the reactions catalyzed by CRL, and their (−)-enantiomers are the main products in the acetylations under PSL catalysis. Absolute configurations have been determined by X-ray analysis of a single crystal of an (R)-α-methoxyphenylacetyl derivative.