Methodology for the preparation of C1-monoalkylated 1,2-dihydro[C70)] derivatives: formation of the "other" regioisomer

Deprotonation of 1,2-C(70)H(2) with TBAOH, followed by alkylation with methyl bromoacetate, results in formation of a C1-monoalkylated 1,2-dihydro-C(70) derivative. The position of the alkyl group (C1) was established by NMR spectroscopy and comparison with literature spectra of C2-monoalkylated analogs. Presumably, C1-alkylation is the major process due to selective deprotonation of 1,2-C(70)H(2) at C1. Substitution of benzyl bromide for methyl bromoacetate results in rapid dialkylation, unless the amount of base is carefully controlled, in which case C1-monobenzylation is the major process. This methodology for alkylation at C1 is complimentary to methods for the C2-monoalkylation of C(70) with Zn and methyl bromoacetate.     

Kinetic isotope effects in cycloreversion of rhenium (V) diolates

Cycloreversion of 4-methoxystyrene from the corresponding Tp'Re(O)(diolato) complex (Tp' = hydrido-tris-(3,5-dimethylpyrazolyl)borate) was measured competitively for various isotopomers at 103 degrees C. Primary ((12)C/(13)C) and secondary ((1)H/(2)H) kinetic isotope effects were determined. The primary KIEs were k(12C)/k(13C) = 1.041 +/- 0.005 at the alpha position and 1.013 +/- 0.006 at the beta position. Secondary KIEs were k(H)/k(D) = 1.076 +/- 0.005 at the alpha position and 1.017 +/- 0.005 at the beta position. Computational modeling (B3LYP/LACVP+) located a transition state for concerted cycloreversion of styrene from TpRe(O)(OCH(2)CHPh) exhibiting dramatically different C-O bond lengths. A Hammett study on cycloreversions of substituted styrenes from a series of Tp'Re(O)(diolato) showed dichotomous behavior for electron donors and electron-withdrawing groups as substituents: rho = -0.65 for electron donors, but rho = +1.13 for electron-withdrawing groups. The data are considered in light of various mechanistic proposals. While the extrusion of 4-methoxystyrene is concluded to be a highly asynchronous concerted reaction, the Hammett study reflects a likelihood that multiple reaction mechanisms are involved.     

Ureidopyrimidinones incorporating a functionalizable p-aminophenyl electron-donating group at C-6

[structure: see text] 2-Ureido-4-[1H]-pyrimidinones have been reported to dimerize via quadruple hydrogen bonding systems with dimerization constants >10(6) M(-1) in CDCl3. The dimerization constant, K(dim), is dependent on the solvent as well as the ring-substituents present, where previously alkyl (e.g., R1 = Me) and aromatic moieties (e.g., R1 = p-NO2C6H4, R1 = C6H2(OC13H27)3) have been incorporated at the C-6 position. To assess the influence of alternative, functionalizable, electron-donating groups on the dimerization motif and tautomeric distribution of isomers, the synthesis of compounds possessing aminophenyl functionality at the C-6 position has been achieved. NMR spectroscopy chemical shift analysis revealed that compound 2 (R1 = p-NH2C6H4, R2 = C6H13) existed as the 2-ureido-4-pyrimidinol dimeric DADA array in DMSO-d6, where a dimerization constant of 46 M(-1) was determined. This is the first time that a ureidopyrimidinone quadruple hydrogen bonding DADA array has been observed in pure DMSO, a highly polar solvent. The azo-derivative 5 of compound 2 was prepared which also adopted the pyrimidin-4-ol form in DMSO-d6. Compounds 7, 10 and 11 were then synthesized containing a more hydrophilic PEG unit in the lateral chain and the tautomeric distributions were determined.     

Thermally stable gold(I) beta-diketiminate complexes

The synthesis and X-ray structures of gold(I) adducts supported by beta-diketiminates have been reported. {[HC{(H)C(2,4,6-Br(3)C(6)H(2))N}(2)]Au}(2) and {[HC{(H)C(Dipp)N}(2)]Au}(2) [Dipp = 2,6-(i-Pr)(2)C(6)H(3)] are easily isolable solids and feature 12-membered macrocyclic ring structures. beta-Diketiminate ligands adopt a W-shaped conformation. Gold atoms are bonded to the nitrogen atoms in a linear fashion. (1)H NMR signals corresponding to the protons at the beta-diketiminate ligand beta-C position of the gold adducts appear at a notably high downfield region.     

Conformational mobility of thianthrene-5-oxide

[reaction: see text] Data on the apparent dipole moment of thianthrene-5-oxide (1) and (1)H NMR spectra in different solvents support the conformational mobility of 1, which flaps between two limit boat conformations with the sulfinyl group in pseudoequatorial and pseudoaxial positions, respectively. The conformational equilibrium of 1 occurs too fast for the (1)H NMR (500 MHz) time-scale even at -130 degrees C, and the equilibrium constant has not been determined. The apparent dipole moments of 1 in n-hexane and 1,4-dioxane and the (1)H NMR spectra of 1 and the model compounds cis- and trans-thianthrene-5,10-dioxides (2) and thianthrene (5) in different solvents and at various temperatures confirm that the relative position of the conformational equilibrium of 1 is solvent-dependent, and more polar solvents favor the conformation with the sulfoxide group in the pseudoaxial position (1(')(ax)). Variable-temperature (1)H NMR spectra have established the interconversion barrier of trans-2 and confirmed that the conformational equilibrium of cis-2 is strongly displaced toward the conformation with both sulfinyl groups in the pseudoequatorial position. The (1)H NMR data support the transannular interaction of the functional groups in 1 and trans-2.     

Reactions of 16e CpCo half-sandwich complexes containing a chelating 1,2-dicarba-closo-dodecaborane-1,2-dichalcogenolate ligand with ethynylferrocene and dimethyl acetylenedicarboxylate

The reaction of the 16e half-sandwich complex [CpCo(S2C2B10H10)] (1S; Cp: cyclopentadienyl) with ethynylferrocene in CH2Cl2 at ambient temperature leads to [CpCo(S2C2B10H9)-(CH2CFc)] (2S; Fc: ferrocenyl) and 1,2,4-triferrocenylbenzene. In 2S, B substitution occurs at the carborane cage in the position B3/B6 with the formation of a C-B bond. In the presence of the protic solvent MeOH, 2S loses a CpCo fragment to generate [(CH2CFc)(S2C2B10H9)] (3S). On the other hand, 2S can take a free CpCo fragment to form [(CpCo)2(S2C2B9H8)-(CHCFc)] (4S) containing a nido-C2B9 unit. In sharp contrast, [CpCo-(Se2C2B10H10)] (1Se) does not react with the alkyne in CH2Cl2, but in MeOH [(CHCFc)(Se2C2B10H10)] (5Se) is generated without the presence of a CpCo unit. The reaction of 1 with dimethyl acetylenedicarboxylate at ambient temperature leads to insertion compounds [CpCo(E2C2B10H10){(MeO2C)-C=C(CO2Me)}] (6S, E=S; 6 Se, E=Se). Upon heating, 6S rearranges to two geometrical isomers [CpCo(S2C2B10H9){(MeO2C)C=CH(CO2Me)}] (7S) and [CpCo(S2C2B10H9){(MeO2C)-CHC(CO2Me)}] (8S). In both, B-H functionalization takes place at the carborane cage in the position B3/B6, but 7S is a 16e complex with an olefinic unit in a Z configuration, and 8S is an 18e complex containing an alkyl B-CH group. Further treatment of 7 S with dimethyl acetylenedicarboxylate at ambient temperature affords two B-disubstituted complexes at the carborane cage in the positions of the B3 and B6 sites, that is, [CpCo(S2C2-B10H8){(MeO2C)C=CH(CO2Me)}2] (9S) and [CpCo(S2C2B10H8){(MeO2C)-CHC(CO2Me)}{(MeO2C)C=CH-(CO2Me)}] (10S). Compound 9S is a 16e complex with two olefinic units in E/E configurations, whereas 10S is an 18e species containing both an olefinic substituent and an alkyl B--CH unit. The reaction of 7S with methyl acetylenemonocarboxylate at ambient temperature leads to the sole 16e compound [CpCo(S2C2B10H8){CH=CH(CO2Me)}-{(MeO2C)C=CH(CO2Me)}] (11S). In contrast, 6Se does not rearrange. All new complexes 2S-4S, 5Se, 6Se, and 7S-11S were characterized by NMR spectroscopy (1H, 11B, 13C) and X-ray structural analyses were performed for 2S-4S, 5Se, 6Se, and 7S-9S.     

Theoretical investigation on the binding specificity of fluorinated sialyldisaccharides Neu5Acα(2–3)Gal and Neu5Acα(2–6)Gal with influenza hemagglutinin H1 – A Molecular Dynamics Study

In the present study, the hydroxyl groups at the C4 and C7 positions of sialic acid and C6 position of galactose in Neu5Acα(2–3)Gal (N23G) and the hydroxyl groups at the C8 position of sialic acid and C3 and C4 positions of galactose in Neu5Acα(2–6)Gal (N26G) were substituted with fluorine atoms, respectively. Molecular dynamics simulations of 100 ns duration were carried out to investigate the structural and dynamical behavior of H1 bound with the tri-fluorinated N23G and N26G (FN23G and FN26G). Based on energy analysis, it was concluded that FN26G should be a better binder for hemagglutinin (H1) than FN23G and it might act as an inhibitor for influenza.     

Theoretical study on the unimolecular decomposition of thiophenol

The potential energy surface for the unimolecular decomposition of thiophenol (C(6)H(5)SH) is mapped out at two theoretical levels; BB1K/GTlarge and QCISD(T)/6-311+G(2d,p)//MP2/6-31G(d,p). Calculated reaction rate constants at the high pressure limit indicate that the major initial channel is the formation of C(6)H(6)S at all temperatures. Above 1000 K, the contribution from direct fission of the S-H bond becomes important. Other decomposition channels, including expulsion of H(2) and H(2)S are of negligible importance. The formation of C(6)H(6)S is predicted to be strong-pressure dependent above 900 K. Further decomposition of C(6)H(6)S produces CS and C(5)H(6). Overall, despite the significant difference in bond dissociation, i.e., 8-9 kcal/mol between the S-H bond in thiophenol and the O-H bond in phenol, H migration at the ortho position in the two molecules represents the most accessible initial channel.     

Theoretical study of the C6H3 potential energy surface and rate constants and product branching ratios of the C2H(2Sigma+) + C4H2(1Sigma(g)+) and C4H(2Sigma+) + C2H2(1Sigma(g)+) reactions

Ab initio CCSD(T)cc-pVTZ//B3LYP6-311G(**) and CCSD(T)/complete basis set (CBS) calculations of stationary points on the C(6)H(3) potential energy surface have been performed to investigate the reaction mechanism of C(2)H with diacetylene and C(4)H with acetylene. Totally, 25 different C(6)H(3) isomers and 40 transition states are located and all possible bimolecular decomposition products are also characterized. 1,2,3- and 1,2,4-tridehydrobenzene and H(2)CCCCCCH isomers are found to be the most stable thermodynamically residing 77.2, 75.1, and 75.7 kcal/mol lower in energy than C(2)H + C(4)H(2), respectively, at the CCSD(T)/CBS level of theory. The results show that the most favorable C(2)H + C(4)H(2) entrance channel is C(2)H addition to a terminal carbon of C(4)H(2) producing HCCCHCCCH, 70.2 kcal/mol below the reactants. This adduct loses a hydrogen atom from the nonterminal position to give the HCCCCCCH (triacetylene) product exothermic by 29.7 kcal/mol via an exit barrier of 5.3 kcal/mol. Based on Rice-Ramsperger-Kassel-Marcus calculations under single-collision conditions, triacetylene+H are concluded to be the only reaction products, with more than 98% of them formed directly from HCCCHCCCH. The C(2)H + C(4)H(2) reaction rate constants calculated by employing canonical variational transition state theory are found to be similar to those for the related C(2)H + C(2)H(2) reaction in the order of magnitude of 10(-10) cm(3) molecule(-1) s(-1) for T = 298-63 K, and to show a negative temperature dependence at low T. A general mechanism for the growth of polyyne chains involving C(2)H + H(C[triple bond]C)(n)H --> H(C[triple bond]C)(n+1)H + H reactions has been suggested based on a comparison of the reactions of ethynyl radical with acetylene and diacetylene. The C(4)H + C(2)H(2) reaction is also predicted to readily produce triacetylene + H via barrierless C(4)H addition to acetylene, followed by H elimination.     

Quinolone Analogs 16: A Facile D–H Exchange for 3‐H Proton of 2‐Substituted 4‐Quinolones in Acidic Media

The 4‐quinolones having the urea or carbamate moiety at the 2‐position showed the facile deuterium–hydrogen (D–H) exchange of the 3‐H proton in deuteriotrifluoroacetic acid‐deuteriodimethyl sulfoxide (3:1) at 60°C, whereas the 4‐quinolones possessing the carboxylate or carbohydrazide group at the 2‐position and 2‐substituted 4‐methoxyquinolines represented no D –H exchange of the 3‐H proton under the same condition. The aforementioned D–H exchange was found to require both the tautomerization of the 4‐quinolone into 4‐hydroxyquinoline in strongly acidic media and the nitrogen functional group at the 2‐position.     

Overtone spectra of aniline derivatives

Overtone spectra of 2-ethylaniline, N-methylaniline, N-ethylaniline, N,N-dimethylaniline and N,N-diethylaniline have been studied in 2500-15000 cm(-1) region. Vibrational frequency and anharmonicity constants for aryl/alkyl C-H stretch and N-H stretch vibrations have been determined. The effect of substitution of C(2)H(5) group on the ortho position in the ring and CH(3)/C(2)H(5) at the positions of the H-atom in NH(2) group has been studied in these molecules. It is noted that the aryl C-H stretching frequency and the N-H stretching frequency is appreciably increased due to the replacement of H in NH(2) group by CH(3)/C(2)H(5). These experimental observations are well supported by theoretical calculations for charge density on N-atom using molecular orbital AM(1) method.     

Stereochemistry and mechanism of the Brønsted acid catalyzed intramolecular hydrofunctionalization of an unactivated cyclic alkene

Through employment of deuterium-labeled substrates, the triflic acid catalyzed intramolecular exo addition of the X-H(D) (X=N, O) bond of a sulfonamide, alcohol, or carboxylic acid across the C=C bond of a pendant cyclohexene moiety was found to occur, in each case, with exclusive formation (≥90%) of the anti-addition product without loss or scrambling of deuterium as determined by (1)H and (2)H NMR spectroscopy and mass spectrometry analysis. Kinetic analysis of the triflic-acid-catalyzed intramolecular hydroamination of N-(2-cyclohex-2'-enyl-2,2-diphenylethyl)-p-toluenesulfonamide (1a) established the second-order rate law: rate=k(2)[HOTf][1a] and the activation parameters ΔH(++)=(9.7±0.5) kcal mol(-1) and ΔS(++)=(-35±5) cal K(-1) mol(-1). An inverse α-secondary kinetic isotope effect of k(D)/k(H) =(1.15±0.03) was observed upon deuteration of the C2' position of 1a, consistent with partial C-N bond formation in the highest energy transition state of catalytic hydroamination. The results of these studies were consistent with a mechanism for the intramolecular hydroamination of 1a involving concerted, intermolecular proton transfer from an N-protonated sulfonamide to the alkenyl C3' position of 1a coupled with intramolecular anti addition of the pendant sulfonamide nitrogen atom to the alkenyl C2' position.     

一类2(1H)-喹喔啉化合物的裂解机理

用电子轰击质谱（EI-MS）研究了一类喹喔啉化合物；1-烷基-3-甲基-2（1H）-喹喔啉-2-酮（1-alkyl-3-methyl-2(1H)-quinoxalin-2-one，简称AMQ，其中alky1=H,CH3，C2H5，n-C3H7，n-C5H11；结果表明随着烷基链的增长，样品熔点通常会有所降低，结合在电子轰击下所产生的裂解碎片离子，并根据其结构特征为乙基化样品为代表，推导了该类化合物在电子轰击作用下可能发生的裂解机理。     

Ligand-Enabled [3+2] Annulation of Aromatic Acids with Maleimides by C(sp3)−H and C(sp2)−H Bond Activation

A palladium-catalyzed [3+2] annulation of substituted benzoic acids with maleimides leading to tricyclic heterocyclic molecules having a free carboxylic group in a high atom- and step-economical manner is described. The reaction proceeds via a dual C−H bond activation such as C(sp³)−H at the benzylic position and C(sp²)−H bond activation at the meta position of substituted aromatics. An external ligand (MPAA) is crucial for the success of present protocol. Further, the decarboxylation and esterification of the free carboxylic acid group of observed products were carried out.     

生物小分子的电分析化学研究 Ⅱ.鸟嘌呤、腺嘌呤和次黄嘌呤在粗热解石墨电极上的分子定向和表面相互作用

本文讨论了鸟嘌呤、腺嘌呤和次黄嘌呤等嘌呤类生物小分子在几种电极上的反应活性,并选用粗热解石墨电极研究了它们的电化学性质.实验结果表明它们的电极过程是受吸附作用控制的.在粗热解石墨电极上鸟嘌呤以C(2)-NH~2、腺嘌呤以C(6)-NH~2、次黄嘌呤以N(1)-H基团按垂直方向吸附于电极表面,电极表面分子间存在着相斥的相互作用.鸟嘌呤、腺嘌呤和次黄嘌呤的吸附平衡常数分别为:(3.34±1.00)×10^5,和(4.38±1.20)×10^5和(4.13±1.21)×10^5;吸附能分别为:(31.5±0.77),(32.1±0.70)和(32.0±0.75)kJ/mol.这些数值表明它们在粗热解石墨电极上具有中等偏强的物理吸附作用.     

Investigating Inner-Sphere Reorganization via Secondary Kinetic Isotope Effects in the C-H Cleavage Reaction Catalyzed by Soybean Lipoxygenase: Tunneling in the Substrate Backbone as Well as the Transferred Hydrogen

This work describes the application of NMR to the measurement of secondary deuterium (2° (2)H) and carbon-13 ((13)C) kinetic isotope effects (KIEs) at positions 9-13 within the substrate linoleic acid (LA) of soybean lipoxygenase-1. The KIEs have been measured using LA labeled with either protium (11,11-h2-LA) or deuterium (11,11-d2-LA) at the reactive C11 position, which has been previously shown to yield a primary deuterium isotope effect of ca. 80. The conditions of measurement yield the intrinsic 2° (2)H and (13)C KIEs on k(cat)/K(m) directly for 11,11-d2-LA, whereas the values for the 2° (2)H KIEs for 11,11-h2-LA are obtained after correction for a kinetic commitment. The pattern of the resulting 2° (2)H and (13)C isotope effects reveals values that lie far above those predicted from changes in local force constants. Additionally, many of the experimental values cannot be modeled by electronic effects, torsional strain, or the simple inclusion of a tunneling correction to the rate. Although previous studies have shown the importance of extensive tunneling for cleavage of the primary hydrogen at C11 of LA, the present findings can only be interpreted by extending the conclusion of nonclassical behavior to the secondary hydrogens and carbons that flank the position undergoing C-H bond cleavage. A quantum mechanical method introduced by Buhks et al. [J. Phys. Chem. 1981, 85, 3763] to model the inner-sphere reorganization that accompanies electron transfer has been shown to be able to reproduce the scale of the 2° (2)H KIEs.     

A new series of luminescent phosphine stabilised platinum ethynyl complexes

A series of cis-platinum ethynyl complexes with the general formula cis-[Pt(dppe)(C[triple bond]CR)2](dppe = 1,2-bis(diphenylphosphino)ethane; R = C6H4-p-NO2 1, C6H4-p-CH3 2, C6H4-p-C[triple bond]CH 3 and C6H4-p-C6H4-p-C[triple bond]CH 4) have been prepared by the coupling reaction of cis-[Pt(dppe)Cl2] with two equivalents of the appropriate alkyne. The new complexes have been fully characterized by spectroscopic techniques, and the cis square planar arrangement at the platinum centre has been confirmed by single-crystal X-ray diffraction studies of complexes 1, 2 and 4. The absorption spectra of the complexes 1-4 are dominated by a pi-->pi* band that contains some platinum (n + 1) p orbital character. The position of the band is dependent on the electron donating or withdrawing properties of the ethynyl substituents, R. Complex 1 displays a triplet emission in the green, at room temperature, while complexes 2-4, display singlet emissions in the blue. Again, the difference can be attributed to the nature of the R substituents.     

Novel estradiol derivatives labeled with Ru,W, and Co complexes. Influence on hormone-receptor affinity of several organometallic groups at the 17 alpha position

In order to elucidate the extent to which recognition of the estrogen receptor is influenced by addition of an organometallic substituent at the 17 alpha position, modification of 17 beta-estradiol at this position was carried out by using the organometallic groups -C identical to C(eta 5-C5H4)RuCp, CH2-(eta 5-C5H4)RuCp, -C identical to C-(eta 5-C5H4)-W(CO)3(Me), -(C identical to CCHO)Co2(CO)6, and -(C identical to CCH2OH)Co2(CO)6. The relative binding affinity (RBA) values for estradiol receptor alpha showed that recognition was good (RBA between 20 and 13.5%) when the organometallic moiety was attached at the end of a rigid alkyne spacer. However, the affinity of the modified hormone for the receptor was severely reduced (RBA = 1%) for a substituent such as -CH2-(eta 5-C5H4)RuCP, in which the spacer is reduced to a single flexible sp3 carbon atom, allowing the organometallic moiety greater freedom of movement around the attachment point. The RBA values found were in agreement with results obtained from a molecular-modeling study in which 5, an organometallic hormone with a rigid spacer, or 7, a molecule with a flexible spacer, was inserted into the cavity of the recently characterized Ligand-Binding Domain of estrogen receptor alpha.     

Direct ab initio dynamics study of radical C4H (X̃2Σ+) + CH4 reaction

The methane (CH(4)) hydrogen abstraction reaction by linear butadiynyl radical C(4)H (CCCCH) has been investigated by direct ab initio dynamics over a wide temperature range of 100-3000 K, theoretically. The potential energy surfaces (PESs) have been constructed at the CCSD(T)/aug-cc-pVTZ//BB1K/6-311G(d,p) levels of theory. Two different hydrogen abstraction channels by C(1) and C(4) of C(4)H (C(1)C(2)C(3)C(4)H) have been considered. The results indicate that the C(1) position of C(4)H is a more reactive site. The electron transfer behaviors of two possible channels are also analyzed by quasi-restricted orbital (QRO) in detail. The rate constants calculated by canonical variational transition-state theory (CVT) with the small-curvature tunneling correction (SCT) are in excellent agreement with available experimental values. The normal and three-parameter expressions of Arrhenius rate constants are also provided within 100-3000 K. It is expected to be helpful for further studies on the reaction dynamics behaviors over a wide temperature range where no experimental data is available so far.     

Synthesis of a simplified bryostatin C-ring analogue that binds to the CRD2 of human PKC-alpha and construction of a novel BC-analogue by an unusual Julia olefination process

[structure: see text] The synthesis of two truncated bryostatin analogues 2 and 3 is described. High-field NMR measurements on the C-ring analogue 3 in C(2)H(3)CN containing 25% (2)H(2)O have shown that it binds to the CRD2 of human PKC-alpha at virtually the same position as phorbol-13-acetate (PA) and bryostatin 1 (1). NMR titration studies have also revealed that 3 binds to the CRD2 with a potency similar in magnitude to PA but much less potently than 1.