Fe-AlPO4-5分子筛的共振拉曼光谱

利用周期性密度泛函的方法, 将过渡金属杂原子取代的硅基分子筛的共振拉曼计算结果成功推广到磷铝分子筛体系中. 根据对Fe-ZSM-5共振拉曼光谱特点的推广和对Fe-AlPO4-5振动光谱的理论计算结果, 预测在Fe-AlPO4-5的共振拉曼光谱的1190、1130、1000-1050和600 cm-1位置附近将出现四条显著的谱带. 实验的Fe-AlPO4-5的共振拉曼光谱中确实观察到四条与骨架Fe物种相关的谱带分别位于1210、1130、1050和630 cm-1处, 与预测结果一致. 另外发现含铁磷铝分子筛的共振振动频率要高于相应的含铁硅基分子筛体系的振动频率, 这种频率的差异主要是氧在不同分子筛体系中受力的力常数不同引起的. 另外磷氧四面体和铝氧四面体之间的电荷吸引作用对振动频率也有较大的影响.     

Resonance Raman studies of xanthine oxidase: The reduced enzyme-product complex with violapterin

A study of the molecular, electronic, and vibrational characteristics of the molybdenum-containing enzyme complex xanthine oxidase with violapterin has been carried out using density functional theory calculations and resonance Raman spectroscopy. The electronic structure calculations were carried out on a model consisting of the enzyme molybdopterin cofactor [in the four-valent, reduced state; Mo(IV)O(SH)] covalently linked to violapterin (1H,3H,8H-pteridine-2,4,7-trione in the neutral form) via an oxygen bridge, Mo-O-C7. Full geometry optimizations were performed for all models using the SDD basis set and the three-parameter exchange functional of Becke combined with the Lee, Yang, and Parr correlational functional. Harmonic vibrational frequencies were determined for a variety of isotopes in an attempt to correlate experimentally observed shifts upon 18O-labeling of the Mo-OR bridge to bound product as well as shifts seen upon substitution of solvent-exchangeable protons in samples prepared in D2O. The theoretical vibrational frequencies compared favorably with experimentally observed vibrational modes in the resonance Raman spectra of the reduced xanthine oxidase-violapterin complex prepared in H2O and D2O and with 18O-labeled product. Correlating the isotopic shifts from the calculations with those from the resonance Raman experiments resulted in complete normal mode assignments for all modes observed in the 350-1750 cm(-1) range. The present work demonstrates that a model in which the violapterin is coordinated to the molybdenum of the active site in a simple end-on manner via the hydroxyl group introduced by an enzyme accurately predicts the observed resonance Raman spectrum of the complex. Given the numerous modes involving the bridging oxygen, a side-on binding mode can be eliminated.     

Casting New Physicochemical Light on the Fundamental Biological Processes in Single Living Cells by Using Raman Microspectroscopy

This Personal Account highlights the capabilities of spontaneous Raman microspectroscopy for studying fundamental biological processes in a single living cell. Raman microspectroscopy provides time‐ and space‐resolved vibrational Raman spectra that contain detailed information on the structure and dynamics of biomolecules in a cell. By using yeast as a model system, we have made great progress in the development of this methodology. The results that we have obtained so far are described herein with an emphasis placed on how three cellular processes, that is, cell‐division, respiration, and cell‐death, are traced and elucidated with the use of time‐ and space‐resolved structural information that is extracted from the Raman spectra. For cell‐division, compositional‐ and structural changes of various biomolecules are observed during the course of the whole cell cycle. For respiration, the redox state of mitochondrial cytochromes, which is inferred from the resonance Raman bands of cytochromes, is used to evaluate the respiration activity of a single cell, as well as that of isolated mitochondrial particles. Special reference is made to the “Raman spectroscopic signature of life”, which is a characteristic Raman band at 1602 cm^?1 that is found in yeast cells. This signature reflects the cellular metabolic activity and may serve as a measure of mitochondrial dysfunction. For cell‐death, “cross‐talk” between the mitochondria and the vacuole in a dying cell is suggested. DOI 10.1002/tcr.201200008     

Resonance CARS study of long-lived species of diphenylhexatriene generated by monophotonic excitation in polar solvent

The transient absorption and resonance CARS (coherent anti-Stokes Raman scattering) spectra of photo-excited all-trans-1,6-diphenyl-1,3, 5-hexatriene (DPH) were studied and a hitherto unknown species was detected from the spectrum observed for an acetone solution. The excited species was generated by monophotonic excitation at 337 nm (ascertained from the dependence of the CARS intensity and that of the transient absorption on the UV power). A lifetime of ≈ 2 μs was obtained by time-resolved CARS. The new species was tentatively ascribed to a radical cation because of its anomalously long lifetime, agreement of the absorption maximum, and disagreement of CARS signals from those of DPH in the S₁ and T₁ states and from those of the radical anion.     

四-(对-磺基苯基)卟啉二酸(H_4~(2+)TSPP)分子聚集体的共振喇曼光谱研究

研究了四－（对－磺基苯基）卟啉二酸（Ｈ２＋４ＴＳＰＰ）的Ｊ－聚集体共振喇曼光谱,用氘代法考察了各喇曼谱带的同位素位移．指认３条低波数喇曼带为分子聚集体的晶格模．喇曼光谱退偏比测量表明,聚集体中Ｈ２＋４ＴＳＰＰ的对称性较分子态降低．比较游离碱Ｈ２ＴＳＰＰ和分子态Ｈ２＋４ＴＳＰＰ共振喇曼光谱讨论了聚集体中Ｈ２＋４ＴＳＰＰ的结构变化．Ｈ２＋４ＴＳＰＰ在聚集体中以接近面对面方式排列     

Kinetic study on enzymatic s-oxygenation promoted by a reconstituted system with purified cytochrome P-450

Thioanisole derivatives ($\text{1a–e}$) were found to be oxygenated by a reconstituted system of purified cytochrome P-450 to give sulfoxides ($\text{2a–e}$). Logarithms of Vmax were found to be correlated linearly with one electron oxidation potentials of the sulfides (Ep) suggesting the oxygenation to proceed via one electron transfer from sulfides to the active species of the enzyme.     

Vibrational study on the cobalt binding mode of Carnosine

The Co(II)-l-Carnosine (Carnos) system was investigated at different pH and metal/ligand molar ratios by Raman and IR spectroscopy. Raman spectra present some marker bands yielding information on the ability of the Co(II)/Carnos system to bind molecular oxygen and to identify the metal co-ordination site of the imidazole ring (N_π or N_τ atom) of Carnos.The existence of different oxygenated species is greatly affected by pH and the structure of the predominant complexes depends on the available nitrogen atoms. Under basic conditions, binuclear complexes binding molecular oxygen are the predominant species and two forms (monobridged and dibridged) were identified by the Raman νO-O band (750-850 cm⁻¹).Decreasing pH to 7, the species present in the system are less able to bind oxygen. Hydrogen peroxide and a Co(III) chelate not binding O₂, were formed with a significant conversion of peroxo into superoxo complexes. A slight excess of Carnos does not enhance metal chelation.In slightly acidic conditions, the formation of H₂O₂ and superoxo species is more enhanced than at pH 7 and another Co(III) chelate is probably formed.     

Time-resolved resonance Raman observation of the dimerization of didehydroazepines in solution

Time-resolved resonance Raman (TR3) studies of the photochemistry of phenyl azide, 3-hyroxyphenyl azide, 3-methoxyphenyl azide and 3-nitrophenyl azide in acetonitrile:water solutions is reported. After photolysis of these four aryl azides in room temperature solutions, only one species was observed in the TR3 spectra for each azide, respectively at the probe wavelengths employed in the TR3 experiments. The species observed after photolysis of 3-nitrophenyl azide was assigned to 3,3'-dinitroazobenzene, an azo compound formed from the dimerization reaction of triplet 3-nitrophenylnitrene. In contrast, the species observed after photolysis of phenyl azide, 3-hydroxyphenyl azide and 3-methoxyphenyl azide were tentatively assigned to intermediates formed from the dimerization of didehydroazepines that are produced from the ring expansion reaction of the respective singlet arylnitrene. To our knowledge, this is the first time-resolved vibrational spectroscopic observation of the dimerization reaction of didehydroazepines in solution. In addition, these are the first resonance Raman spectra reported for dimers formed from didehydroazepines. We briefly discuss the structures, properties and chemical reactivity of the dimer species observed in the TR3 spectra and possible implications for the photochemistry of aryl azides.     

Immunoassay utilizing biochemistry reaction product via surface-enhanced Raman scattering in near field

In recent years, surface-enhanced Raman scattering (SERS) has been a topic of keen interest with regard to the detection of trace biological materials[1―8]. A wide range of SERS studies aimed at investigating structure, topology, and composition of biome…     

Effect of aluminum on the nature of the iron species in Fe-SBA-15

We report the preparation of highly ordered mesoporous Fe-Al-SBA-15 with isolated extraframework Fe species under acidic conditions. The materials were characterized by means of UV resonance Raman spectroscopy, in conjunction with BET, XRD, TEM, UV-vis, H2-TPR, FT-IR, and 27Al MAS NMR spectroscopy. The addition of both Fe and Al to the synthesis gel of SBA-15 results in the formation of isolated extraframework Fe species located close to the framework Al ions and the Fe content an order of magnitude higher than that in Fe-SBA-15 synthesized without Al. The existence of anchored extraframework Fe species was confirmed by the presence of a strong absorption band at 270 nm, hydrogen reduction at relatively low temperature, and the presence of a resonance Raman band at 1140 cm(-1). The location of Fe in close proximity to framework Al nuclei is further supported by 27Al MAS NMR measurements. Two characteristic UV Raman bands at 510 cm(-1) and 1090 cm(-1) excited by 244-nm laser are assigned to Fe-O-Si symmetric and asymmetric stretching modes of isolated tetrahedral Fe ions in the silica framework for Fe-SBA-15. The resonance Raman band at 1140 cm(-1) excited by 325-nm laser is attributed to the asymmetric stretching mode of the isolated extraframework iron species in Fe-Al-SBA-15. The isolated Fe species close to framework Al species are stable in acidic HCl solution, whereas the majority of Fe species in Fe-SBA-15 can be easily removed.     

The Photochemistry of Ch3I in Various Matrices at Low Temperature

The photodissociation of methyl iodide in various matrices at low temperature was studied. The observed Raman spectra excited by 514.5 nm laser radiation showed that there were two different photolytically produced iodine species isolated in the matrices after illumination by a medium pressure mercury lamp. One species which was dominant at lower iodine concentrations and exhibited a progression with an ωe of 201 cm^?1, belonged to the matrix isolated iodine monomer (I₂). The other species, which was dominant at higher iodine concentrations with an ω_e of approximately 180 cm^?1, belonged to the iodine aggregate ((I₂)_n). Five progressions of resonance Raman or resonance fluorescence of these two species were also observed in the other matrices. The iodine aggregate in the methyl iodide matrix at 77 K was formed in a crystalline structure, while the photolytically generated iodine aggregate from CH₃I/Ar (2/3) matrix at 10 K, after illumination with a mercury lamp, was in amorphous form. The rearrangement of photolytically produced iodine aggregate in methyl iodide matrix was observed as a function of the duration of illumination. Local heating effects of the laser radiation might induce the iodine monomer to aggregate in matrices. The photodissociation mechanism of methyl iodide in matrices is also proposed.     

Isolation, Purification and Spectral Characteristics of Soluble Guanylate Cyclase from Bovine Lung *

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Direct observation of the 4-methoxyphenylnitrene intersystem crossing from S1 to T1 using picosecond Kerr-gated time-resolved resonance Raman spectroscopy

A picosecond Kerr-gated time-resolved resonance Raman (ps-KTR(3)) study of the singlet 4-methoxyphenylnitrene intersystem crossing to produce the triplet 4-methoxyphenylnitrene species is reported. The experimental resonance Raman vibrational band frequencies observed for the singlet and triplet 4-methoxylphenylnitrene species in the time-resolved Raman experiments are compared to each other and to predictions from previously published density functional theory calculations. The structure, properties, and chemical reactivity of the singlet and triplet states of the 4-methoxyphenylnitrenes are briefly discussed.     

Azo-hydrazone tautomerism in protonated aminoazobenzenes: resonance Raman spectroscopy and quantum-chemical calculations

The protonation effect on the vibrational and electronic spectra of 4-aminoazobenzene and 4-(dimethylamino)azobenzene was investigated by resonance Raman spectroscopy, and the results were discussed on the basis of quantum-chemical calculations. Although this class of molecular systems has been investigated in the past concerning the azo-hydrazone tautomerism, the present work is the first to use CASSCF/CASPT2 calculations to unveil the structure of both tautomers as well the nature of the molecular orbitals involved in chromophoric moieties responsible for the resonance Raman enhancement patterns. More specifically both the resonance Raman and theoretical results show clearly that in the neutral species, the charge transfer transition involves mainly the azo moiety, whereas in the protonated forms there is a great difference, depending on the tautomer. In fact, for the azo tautomer the transition is similar to that observed in the corresponding neutral species, whereas in the hydrazone tautomer such a transition is much more delocalized due to the contribution of the quinoid structure. The characterization of protonated species and the understanding of the tautomerization mechanism are crucial for controlling molecular properties depending on the polarity and pH of the medium.     

Surface-enhanced resonance Raman spectroscopic characterization of the protein native structure

Surface-enhanced resonance Raman scattering (SERRS) spectra of biological species are often different from their resonance Raman (RR) spectra. A home-designed Raman flow system is used to determine the factors that contribute to the difference between the SERRS and RR of met-myoglobin (metMb). The results indicate that both the degree of protein-nanoparticles interaction and the laser irradiation contribute to the structural changes and are responsible for the observed differences between the SERRS and RR spectra of metMb. The prolonged adsorption of the protein molecules on the nanoparticle surface, which is the condition normally used for the conventional SERRS experiments, disturbs the heme pocket structure and facilitates the charge transfer process and the photoinduced transformation of proteins. The disruption of the heme pocket results in the loss of the distal water molecule, and the resulting SERRS spectrum of metMb shows a 5-coordinated high-spin heme. The flow system, when operated at a moderately high flow rate, can basically eliminate the factors that disturb the protein structure while maintaining a high enhancement factor. The SERRS spectrum obtained from a 1 x 10 (-7) M metMb solution using this flow system is basically identical to the RR spectrum of a 5 x 10 (-4) M metMb solution. Therefore, the Raman flow system reported here should be useful for characterizing the protein-nanoparticles interaction and the native structure of proteins using SERRS spectroscopy.     

Transient resonance Raman and density functional theory investigation of the ultraviolet photolysis of dibromoacetonitrile in the solution phase

Ultraviolet photolysis of dibromoacetonitrile in cyclohexane solution was investigated using transient resonance Raman spectroscopy. The experimental Raman vibrational frequencies were compared to those predicted from density functional theory calculations for several probable photoproduct species. Our results indicate that significant amounts of the Br–NCCHBr adduct is produced on the nanosecond time scale. We briefly discuss the probable mechanisms of formation of the Br–NCCHBr species and implications for using substituted dihaloalkanes as carbenoid agents in cyclopropanation reactions.     

Surface species produced in the radiolysis of zirconia nanoparticles

Modifications to water-zirconia nanoparticle interfaces induced by gamma irradiation have been examined using diffuse reflection infrared Fourier transform (DRIFT), Raman scattering, and electron paramagnetic resonance (EPR) techniques. Spectroscopy with in situ heating was used to probe variations in the dissociatively bound chemisorbed water on the zirconia nanoparticles following evaporation of the physisorbed water. DRIFT spectra show that the bridged Zr-OH-Zr species decreases relative to the terminal Zr-OH species upon irradiation. No variation is observed with Raman scattering, indicating that the zirconia morphology is unchanged. EPR measurements suggest the possible formation of the superoxide ion, presumably by modification of the surface OH groups. Trapped electrons and interstitial H atoms are also observed by EPR.     

Inactivation of horseradish peroxidase by phenoxyl radical attack

To test the hypothesis that horseradish peroxidase (HRP) can be inactivated by phenoxyl radicals upon reaction with H(2)O(2)/phenol, we probed HRP-catalyzed phenol oxidation at various phenol/H(2)O(2) concentrations. To this end the total protein, phenolic product, active protein, and iron concentrations in the aqueous phase were determined by protein assay, phenol-(14)C isotopic labeling, resonance Raman and atomic absorption spectroscopy, respectively. Additionally, resonance Raman and FTIR measurements were carried out to probe possible structural changes of the enzyme during the reaction. The data obtained provide the first experimental support for the hypothesis that HRP can be inactivated by a phenoxyl radical attack. The heme macrocycle destruction involving deprivation of the heme iron occurs as a result of the reaction. An intermediate type of the active protein was observed by Raman difference spectra at low concentrations which features a stabilization of the quantum mixed state of the heme iron and a significant amount of phenoxylphenol-type oligomers in solution and probably also in the heme pocket. This work provides a basis for evaluating the relative contributions of different HRP inactivation mechanisms and is thus critical for optimizing engineering applications involving HRP reactions.     

Near-infrared excitation of Raman scattering by chromophoric proteins

Fourier-transformed Raman spectra of bacteriorhodopsin, the photosynthetic reaction center, and myoglobin in aqueous solution excited at 1064 nm are presented. These proteins are representative of three important classes of chromophoric proteins. The observed vibrational modes are assigned and discussed based on the known resonance Raman spectra of these proteins. In each case, chromophore vibrations dominate the Raman scattering, with little or no contribution from other protein vibrations. However, the limitations encountered in resonance Raman studies of chromophoric proteins due to sample fluorescence or sample photolability are circumvented. The relative intensities in the bacteriorhodopsin Raman spectrum excited at 1064 nm are nearly identical to the relative intensities previously observed by resonance excitation. The Raman spectrum of the reaction center of the photosynthetic bacterium Rhodobacter sphaeroides excited at 1064 nm contains contributions from both bacteriochlorophyll and bacteriopheophytin pigments, with possible preresonance enhancement of bacteriochlorophyll modes. The 1064-nm-excited Raman spectrum of myoglobin displays several marker bands that have been characterized previously in resonance Raman investigations with excitation in both the Soret and Q-band regions.