Interpretation of the UV-vis spectra of the meso(ferrocenyl)-containing porphyrins using a TDDFT approach: is Gouterman's classic four-orbital model still in play?

The vertical excitation energies of H(2)TPP [TPP = 5,10,15,20-tetraphenylporphyrin(2-)], H(2)FcPh(3)P [FcPh(3)P = 5-ferrocenyl-10,15,20-triphenylporphyrin(2-)], cis-H(2)Fc(2)Ph(2)P [cis-Fc(2)Ph(2)P = 5,10-bisferrocenyl-15,20-diphenylporphyrin (2-)], trans-H(2)Fc(2)Ph(2)P [trans-Fc(2)Ph(2)P = 5,15-bisferrocenyl-10,20-diphenylporphyrin(2-)], H(2)Fc(3)PhP [H(2)Fc(3)PhP = 5,10,15-trisferrocenyl-20-phenylporphyrin(2-)], and H(2)TFcP [TFcP = 5,10,15,20-tetraferrocenylporphyrin(2-)] were investigated using a time-dependent density functional theory (DFT) approach and compared to their experimental UV-vis spectra in the 10,000-30,000 cm(-1) region. It was shown that the lowest energy transitions in meso(ferrocenyl)-containing porphyrins have predominantly ferrocene-to-porphyrin charge transfer character, while the porphyrin-centered π-π* transitions predicted by the Gouterman's classic four-orbital model still have the largest intensities in the UV-vis region. The number of predominantly ferrocene-to-porphyrin charge transfer transitions increases with the number of ferrocene substituents and becomes dominant in H(2)TFcP.     

Ultrafast hybridization screening in Fe3+ aqueous solution

We report here on the electron binding energies and ultrafast electronic relaxation of the Fe(3+)(aq) complex in FeCl(3) aqueous solution as measured by soft X-ray photoelectron (PE) spectroscopy from a vacuum liquid microjet. Covalent mixing between the 3d valence orbitals of the iron cation and the molecular orbitals of water in the ground-state solution is directly revealed by spectroscopy of the highest partially occupied molecular orbitals. Valence PE spectra, obtained for photon energies near the iron 2p absorption edge, exhibit large resonant enhancements. These resonant PE features identify 3d-O2p transient hybridization between iron and water-derived orbitals and are an indication of charge transfer within the electronically excited Fe(3+)(aq)* complex. Charge transfer from water to iron is also revealed by the 2p core-level PE spectrum, and the asymmetric peak shape additionally identifies the characteristic multiplet interactions in the 2p core-hole state. The electronic structure of water molecules in the first hydration shell is selectively probed by Auger decay from water molecules, at excitation energies well below the O1s absorption edge of neat water. These experiments lay the groundwork for establishing resonant PE spectroscopy for the study of electronic-structure dynamics in the large family of transition metal (aqueous) solutions.     

Experimental and DFT studies on DNA binding and photocleavage of two cationic porphyrins. Effects of the introduction of a carboxyphenyl into pyridinium porphyrin

The DNA-binding affinities and DNA photocleavage abilities of cationic porphyrin, 5-(4-carboxyphenyl)-10,15,20-tris(4-methylpyridiniumyl)porphyrin (CTMPyP), and its reference compound meso-tetrakis(N-methyl-4-pyridiniumyl)porphyrin (H2TMPyP) have been investigated. The DNA-binding behaviors of the two compounds in NaH2PO4 buffer were compared systematically by using absorption, fluorescence and circular dichroism (CD) spectra, thermal denaturation as well as viscosity measurements. The experimental results show that CTMPyP binds to DNA in an outside binding mode, while H2TMPyP in an intercalative mode. Photocleavage experiments reveal that both two compounds employ 1O2-mediated mechanism in cleaving DNA and H2TMPyP can cleave DNA more efficiently than CTMPyP. Theoretical calculations were carried out with the density functional theory (DFT), and the calculated results indicate that the character and energies of some frontier orbitals of CTMPyP are quite different from those of H2TMPyP. These theoretical results can be used to explain their different DNA-binding modes and affinities to a certain extent.     

Derivatization of valproic acid using ferrocene derivatives: Synthesis,characterization and investigation of optical and electrochemical properties

New ferrocenyl‐based valproic acid (VPA) ester derivatives were designed and synthesized according to the reaction of appropriate haloalkylferrocene derivatives with VPA in the presence of K₂CO₃ and a catalytic amount of 18‐crown‐6 ether. Elemental analyses and Fourier transform infrared, ¹H NMR, ¹³C NMR and mass spectra all well confirmed the predicted molecular structure. This is the first report in which ferrocene has been applied in derivatization of VPA as a chromogenic group. The electrochemical properties of the synthesized compounds were studied using cyclic voltammetry measurements, and energies of the frontier molecular orbitals were determined. In addition, the solubilities of the final compounds were studied in distilled water, phosphate buffer (pH = 7.4) and 0.9% (w/v) NaCl solution.     

Oxygen, carbon, and sulfur segregation in annealed and unannealed zerovalent iron substrates

Finely ground and pretreated iron substrates known as "zerovalent iron" or "Fe0" are used as reductants in the environmental remediation of halogenated hydrocarbons, and the composition of their surfaces significantly affects their reactivity. Samples of unannealed and annealed (heat-treated under H2/N2) zerovalent iron were analyzed using X-ray photoelectron spectroscopy (XPS) and Auger electron spectroscopy (AES). Surface concentration of the iron and of the impurities observed by XPS and AES, carbon, chlorine, sulfur, and oxygen, were measured before and after soaking in trichloroethylene (TCE) and in water saturated with TCE (H2O/TCE) to simulate chlorocarbon remediation conditions. Samples pretreated by annealing at high temperature under H2 contained less iron carbide. The carbide contaminant was evident in both iron and carbon XPS spectra, with binding energies of 709.0 and 283.3 eV for the Fe 2p3/2 and C 1s, respectively. The annealed Fe0 surface also contained more sulfur. The carbide concentration was essentially unchanged by TCE and H2O/TCE exposure, whereas the sulfur decreased in proportion to chlorine adsorption following the dechlorination reaction. While oxygen concentration is initially lower on the annealed substrate surface, it rapidly increased during the model TCE remediative treatment process and thus does not represent a significant effect of the annealing process on surface reactivity.     

三种尾式卟啉的合成及结构表征

5-（4-羟基苯基）-10，15，20-（4-甲氧基苯基）卟啉（1）与乙酰水杨酰氯 反应得到化合物3.5-[4-（4-溴丁氧基）苯基]-10，15，20-三（4-甲氧基苯基）卟 啉（2）分别与苯基哌嗪和1-（4-甲氧基苯基）哌嗪作用，制得了化合物4和5。合 成的新化合物分别经吸收光谱，^1H NMR，MS和元素分析所证实。     

不对称希夫碱卟啉及其稀土配合物的合成与表征

以二甲基甲酰胺为溶剂,5-对氨基苯基-10,15,20-三苯基卟啉与苯甲醛直接反应得到一种不对称希夫碱卟啉化合物,并合成了它的稀土配合物.用元素分析、紫外-可见光谱、红外光谱1、H核磁共振以及X射线光电子能谱对这些化合物进行了表征,推测了稀土乙酰丙酮卟啉配合物的结构,稀土离子与乙酰丙酮的两个O原子和卟啉的4个吡咯N原子配位,配位数为6,稀土离子位于卟啉平面的上方.     

Electrospray tandem mass spectrometry of new porphyrin amino acid conjugates

Porphyrin amino acid conjugates with one or two porphyrin units were analyzed by electrospray ionization tandem mass spectrometry (ESI-MS/MS). The ESI-MS spectra of all the porphyrins studied, obtained in positive ion mode, show the presence of the corresponding protonated molecule [M+H]+; ESI-MS spectra of diporphyrinyl compounds also show the doubly charged ions [M+2H]2+. The fragmentations of these ions induced by collision with argon were studied (ESI-MS/MS). ESI-MS/MS gives detailed structural information about the amino acids associated with the porphyrin. Cleavage of the bonds in the vicinity of the porphyrin moiety and those involving the side chain of amino acid residues gives structural information about this type of association. A fragmentation common to all derivatives corresponds to the cleavage of the phenyl-CO bond. The expected cleavage of the amide bond, that links the porphyrin to the amino acid moiety, is a minor fragmentation, which in some cases is even absent. The MS/MS spectra of the monoporphyrinyl derivatives show product ions characteristic of the amino acid linked to the porphyrin; the fragmentation also indicates when the amino acids has a terminal carboxylic group or a terminal ester group. The fragmentations of the diporphyrinyl compounds occur mainly by the cleavage of the spacer, leading, in the case of the doubly charged ions, to predominantly mono-charged ions, indicating a preferential location of the two protons in separated porphyrinic units.     

Physicochemical characterization of nanobidentate ferrocene‐based Schiff base ligand and its coordination complexes: Antimicrobial,anticancer, density functional theory,and molecular operating environment studies

A novel bidentate Schiff base ligand (HL, Nanobidentate Ferrocene based Schiff base ligand L (has one replaceable proton H)) was prepared via the condensation of 2‐amino phenol with 2‐acetyl ferrocene. The ligand was characterized using elemental analysis, mass spectrometry, infrared (IR) spectroscopy, ¹proton nuclear magnetic resonance (H‐NMR) spectroscopy, scanning electron microscopy (SEM), and thermal analysis. The corresponding 1:1 metal complexes with some transition‐metal ions were additionally characterized by their elemental analysis, molar conductance, SEM, and thermogravimetric ana1ysis (TGA). The complexes had the general formula [M(L)(Cl)(H₂O)₃]xCl·nH₂O (M = Cr(III), Mn(II), Fe(III), Co(II), Ni(II), Cu(II), Zn(II), and Cd(II)), (x = 0 for Mn(II), Co(II), Ni(II), Cu(II), Zn(II), and Cd(II), x = 1 for Cr(III) and Fe(III)), (n = 1 for Cr(III), n = 3 for Mn(II) and Co(II), n = 4 for Fe(III), Ni(II), Cu(II), Zn(II), and Cd(II)). Density functional theory calculations on the HL ligand were also carried out in order to clarify molecular structures by the B31YP exchange‐correlation function. The results were subjected to molecular orbital diagram, highest occupied mo1ecu1ar orbital–lowest occupied molecular orbital, and molecular electrostatic potential calculations. The parent Schiff base and its eight metal complexes were assayed against four bacterial species (two Gram‐negative and two‐Gram positive) and four different antifungal species. The HL ligand was docked using molecular operating environment 2008 with crystal structures of oxidoreductase (1CX2), protein phosphatase of the fungus Candida albicans (5JPE), Gram(?) bacteria Escherichia coli (3T88), Gram(+) bacteria Staphylococcus aureus (3Q8U), and an androgen‐independent receptor of prostate cancer (1GS4). In order to assess cytotoxic nature of the prepared HL ligand and its complexes, the compounds were screened against the Michigan cancer foundation (MCF)‐7 breast cancer cell line, and the IC₅₀ values of compounds were calculated.     

Fe3O4 nanocrystals with novel fractal

Fe3O4 novel fractal nanocrystals have been synthesized by a surfactant-assisted solvothermal process for the first time. X-ray diffraction (XRD), X-ray photoelectron spectra (XPS), M?ssbauer spectroscopy (MS), scanning electron microscopy (SEM), and transmission electron microscopy (TEM) have been used to investigate the novel fractal nanocrystals. The lengths of the fractals are about 2-3 microm, and the trunks and branches of Fe3O4 fractals have almost the same diameters of ca. 30-50 nm. The roles of surfactant PEG-20000 and N2H4 have been discussed in detail. One key fact has been found that the ferrocene concentration has a vital effect on the morphologies of the products. The side-branching process and the oscillation of the concentration have been proposed to illustrate the formation mechanisms of the fractal nanocrystals. In addition, magnetic properties of Fe3O4 fractal nanocrystals have also been detected by a vibrating sample magnetometer, showing relatively high saturation magnetization (Ms) of ca. 78.75 emu/g.     

Electron- and hydride-transfer reactivity of an isolable manganese(V)-oxo complex

The electron-transfer and hydride-transfer properties of an isolated manganese(V)?oxo complex, (TBP8Cz)Mn(V)(O) (1) (TBP8Cz = octa-tert-butylphenylcorrolazinato) were determined by spectroscopic and kinetic methods. The manganese(V)?oxo complex 1 reacts rapidly with a series of ferrocene derivatives ([Fe(C5H4Me)2], [Fe(C5HMe4)2], and ([Fe(C5Me5)2] = Fc*) to give the direct formation of [(TBP8Cz)Mn(III)(OH)]? ([2-OH]?), a two-electron-reduced product. The stoichiometry of these electron-transfer reactions was found to be (Fc derivative)/1 = 2:1 by spectral titration. The rate constants of electron transfer from ferrocene derivatives to 1 at room temperature in benzonitrile were obtained, and the successful application of Marcus theory allowed for the determination of the reorganization energies (λ) of electron transfer. The λ values of electron transfer from the ferrocene derivatives to 1 are lower than those reported for a manganese(IV)?oxo porphyrin. The presumed one-electron-reduced intermediate, a Mn(IV) complex, was not observed during the reduction of 1. However, a Mn(IV) complex was successfully generated via one-electron oxidation of the Mn(III) precursor complex 2 to give [(TBP8Cz)Mn(IV)]+ (3). Complex 3 exhibits a characteristic absorption band at λ(max) = 722 nm and an EPR spectrum at 15 K with g(max)′ = 4.68, g(mid)′ = 3.28, and g(min)′ = 1.94, with well-resolved 55Mn hyperfine coupling, indicative of a d3 Mn(IV)S = 3/2 ground state. Although electron transfer from [Fe(C5H4Me)2] to 1 is endergonic (uphill), two-electron reduction of 1 is made possible in the presence of proton donors (e.g., CH3CO2H, CF3CH2OH, and CH3OH). In the case of CH3CO2H, saturation behavior for the rate constants of electron transfer (k(et)) versus acid concentration was observed, providing insight into the critical involvement of H+ in the mechanism of electron transfer. Complex 1 was also shown to be competent to oxidize a series of dihydronicotinamide adenine dinucleotide (NADH) analogues via formal hydride transfer to produce the corresponding NAD+ analogues and [2-OH]?. The logarithms of the observed second-order rate constants of hydride transfer (k(H)) from NADH analogues to 1 are linearly correlated with those of hydride transfer from the same series of NADH analogues to p-chloranil.     

Spectroscopic and theoretical studies of Ga(III)protoporphyrin-IX and its reactions with myoglobin

Ga(III)protoporphyrin-IX (Ga-PP) has been proposed as a model for the key interporphyrin interactions in malaria pigment. Unlike the paramagnetic parent iron heme derivatives, Ga-PP is readily soluble in methanol (MeOH). We report optical, mass spectroscopic, and theoretical results for Ga-PP as well as its reactions with myoglobin. UV-visible absorption and MCD spectroscopy show that Ga-PP exhibits a typical spectrum for a main group metal: a Q-band at 539 nm and a B band at 406 nm when dissolved in MeOH. We also report optical data for Zn(II)protoporphyrin IX (Zn-PP) dissolved in MeOH, which exhibits a Q-band at 545 nm and a B band at 415 nm. ESI mass spectral data for Ga-PP dissolved in MeOH show the presence of predominantly monomers, with smaller fractions of dimers [(Ga-PP)(2)] and trimers. UV-visible and MCD absorption spectroscopy and ESI mass spectral data demonstrate the successful insertion of monomeric Ga-PP into apo-Mb. Ga-PP-Mb exhibits a B band at 417 nm and Q bands at 545 and 584 nm, which are all red-shifted from the free Ga-PP values. The calculated electronic structures and frontier molecular orbitals of Ga-PP, (Ga-PP)(2) and Zn-PP fit the previously reported trends in band energies and oscillator strengths as a function of molecular orbital energies. These new data can be applied to explain the experimentally observed optical spectroscopy. The observed Q-band energies are accounted for by calculated (HOMO-LUMO) gap of the frontier MOs, while the split in the two top occupied MOs accounts for the magnitude of the Q-band oscillator strength as well as the experimentally observed Q to B band energy separation. Although Ga-PP shares more spectroscopic properties with Zn-PP than it does with Fe(III)PPIX, the trivalent oxidation state allows this molecule to be used as a model for ferric hemes in heme proteins.     

PVP-coated iron nanocrystals: Anhydrous synthesis, characterization, and electrocatalysis for two species

We report the synthesis of Fe nanocrystals (approximately 9 nm) in an anhydrous media, formamide, using poly(N-vinyl-2-pyrrolidone) (PVP) as a protecting agent. The morphology, structure, and composition of the PVP-coated Fe nanocrystals are studied by transmission electron microscopy (TEM), X-ray diffraction (XRD), X-ray photoelectron spectroscopy (XPS), and FT-Raman spectroscopy. The surface properties of the PVP-coated Fe nanocrystals are studied by electrochemistry and micro-surface-enhanced Raman scattering (mSERS) using pyridine as a probing molecule. The PVP-coated Fe nanocrystals, when immobilized on an electrode substrate, display very good electrocatalytic activities in the selective reduction of H2O2 in the presence of oxygen and in the oxidation of NO.     

Role of Hartree-Fock and Kohn-Sham orbitals in the basis set superposition error for systems linked by hydrogen bonds

In this work the effect of the basis set superposition error (BSSE) is explored with the counterpoise method on the occupied and unoccupied Hartree-Fock (HF) and Kohn-Sham (KS) orbitals. Three different systems linked by hydrogen bonds, H(2)O...FH, H(2)O...H(2)O, and H(2)O...CFH(3), were studied by using the basis set families cc-pVXZ and aug-cc-pVXZ (X = D, T, Q). The basis sets were tested with the HF method and two approximations for the exchange-correlation functional of KS: a generalized gradient approximation and a hybrid approach. In addition to these methods, the second-order M?ller-Plesset perturbation theory, MP2, was considered. It was found that the presence of the "ghost" basis set affects the orbitals in two ways: (1) The occupied KS orbitals are more sensitive to the presence of this "ghost" basis set than the occupied HF orbitals. For this reason the BSSE observed in HF is less than that obtained with KS. (2) The unoccupied HF orbitals are more sensitive to the presence of the "ghost" basis set than their corresponding occupied orbitals. Because the MP2 method uses both, occupied and unoccupied HF orbitals, to compute the total energy, the contribution of the BSSE is bigger than that obtained with HF or KS methodologies.     

Electronic structure,chemical bonding,and oxidation numbers of first‐row transition metals in [MePIm2] complexes and their cations

The qualitative structures of the upper one‐electron energy levels of imidazole‐coordinated first‐row transition metal porphyrin [MePIm₂] complexes established in the present study have shown that the second oxidation number of the first‐row transition metals in the neutral complexes do not change in their cations and double cations. It was found that occupied orbitals of the density functional theory method obtained with B3LYP functional are not correctly ordered. Therefore, they cannot be used in investigations of the orbital structure of the upper molecular orbitals. A qualitative analysis of density functional theory method wave functions in terms of Mulliken and natural charges of atoms, together with an analysis of electrostatic potentials of the neutral [MePIm₂] complex, its single and double cations, demonstrates that the highest occupied orbitals of these complexes are mainly formed by atomic orbitals of the porphyrin ring atoms. Therefore, transition metal atoms are not active in chemical reactions with these complexes unless the 3d electrons of transition metal atoms are excited, for example by light. A mechanism of an electron transfer reaction that occurs between a heme cytochrome and Fe‐oxide mineral surface is discussed in the light of the obtained results. © 2010 Wiley Periodicals, Inc. Int J Quantum Chem, 2011     

二茂铁催化制备CNx纳米管的研究

CNx nanotubes have been synthesized by thermal decomposition of ferrocene/ethylenediamine (Fe(C5H5)2/C2H8N2) mixture using ferrocene as the catalyst at 800~1040℃. Transmission electron microscopy (TEM) and Raman spectroscopic were used to characterize the CNx nantoubes produced at different temperatures, whose yields were also investigated. It is shown that the CNx nanotubes have bamboo like structure, and the average diameter, crystallinity and yields increase with the temperature increasing. X-ray photoelectron spectrum (XPS) revealed the nitrogen incorporation of the CNx nanotubes. The catalysis mechanism of ferrocene in the growth of the CNx nanotubes is also discussed.     

Synthesis and Characterization of Donor–π‐Acceptor‐Based Porphyrin Sensitizers: Potential Application of Dye‐Sensitized Solar Cells

New porphyrin sensitizers based on donor–π‐acceptor (D‐π‐A) approach have been designed, synthesized, characterized by various spectroscopic techniques and their photovoltaic properties explored. N,N′‐Diphenylamine acts as donor, the porphyrin is the π‐spacer, and either carboxylic acid or cyanoacryclic acid acts as acceptor. All compounds were characterized by using ¹H NMR spectroscopy, ESI‐MS, UV–visible emission spectroscopies as well as electrochemical methods. The presence of aromatic groups between porphyrin π‐plane and acceptor group push the absorption of both Soret and Q‐bands of porphyrin towards the red region. The electrochemical properties suggests that LUMO of these sensitizers above the TiO₂ conduction band. Finally, the device was fabricated using liquid redox electrolyte (I^?/I₃^?) and its efficiency was compared with that of a leading sensitizer.     

硝基苯并咪唑衍生物的合成、表征及抑菌活性的测定

以苯并咪唑为原料,经硝化、二茂铁磺酰化等步骤,合成了8种未见文献报道的硝基苯并咪唑衍生物,其结构经MS,¹H NMR和元素分析确证.由于硝基苯并咪唑的互变异构,二茂铁磺酰化后,产生两个异构体,用X射线衍射仪测定了化合物2a的晶体结构.初步的抑菌实验结果表明,该系列化合物具有良好的抑菌作用,其抑菌活性均优于对照药剂50%多菌灵可湿性粉剂.     

Electronic structure of aryl- and carbonyl-containing diazomethane derivatives,as disclosed by photoelectron spectroscopy

Vertical ionization energies (IE) of aryl and carbonyl derivatives of diazomethane have been determined by photoelectron spectroscopy. The types of the highest occupied molecular orbitals (HOMO) in these molecules are identified.Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 2, pp. 325–328, February, 1993.     

Dinickelaferrocene: A Ferrocene Analogue with Two Aromatic Nickeloles Realized by Electron Back-Donation from Iron

The first example of ferrocene analogues with two transition-metal metallole ligands of the general formula (η⁵-C₄R₄M)₂Fe in a sandwich structure are reported. Specifically, dinickelaferrocene 2 , a type of dimetallametallocene, is efficiently synthesized from the reaction of dilithionickelole 1 with FeBr₂ or FeCl₂, presumably via a redox process, and is subjected to detailed experimental (single-crystal X-ray structural analysis, ICP-OES, magnetometry, ⁵⁷Fe Mössbauer, XPS) and theoretical (MOs, CDA, NICS, ICSS, and AICD) characterizations. Unlike ferrocene and its Cp ligands, the aromaticity of dinickelaferrocene and its nickelole ligands is accomplished by electron back-donation from the Fe 3d orbitals to the π* orbitals of nickelole. Taken together, this work describes a new class of metallaferrocene sandwich complexes and provides a novel approach to effect aromaticity that will contribute to further development of metallocene chemistry.