Participation of halogen atoms in hydrogen transfer between remote positions in gas-phase ionized isomeric haloresorcinols

Mono, di- and trihaloresorcinols substituted by a halogen atom at position 2 exhibit a highly specific elimination of H₂O on electron impact ionization and under conditions of collisionally induced dissociation (CID). The high isomer specificity suggests the intermediacy of a hydrogen transfer from one of the hydroxy groups to the adjacent halogen atom. A subsequent hydrogen migration to the other hydroxy group readily explains the facile elimination of H₂O from the M^+· ions of these particular isomers. An analogous three-step hydrogen transfer has not been observed in 2,3-dihalo-l,4-hydroquinones. 4-Bromo- and 4-icdoresorcinol undergo elimination of the halogen atom followed by a very fast loss of CO under CID conditions, affording [M ? Hal]⁺ ions of low abundance and highly abundant[M ? Hal ? CO]⁺ ions. The elimination of CO is suppressed in the isomeric 5-haloresorcinols, resulting in very highly abundant [M ? Hal]⁺ ions. This behavior suggests that a ‘hidden hydrogen transfer’ accompanies the elimination of the halogen atom from the molecular ions of 4-haloresorcinols.     

Gas phase reactivity of cation radicals and protonated species from isomeric C4H8S thioethers

Four isomeric thioethers, 2,3-dimethylthiirane ( 1 ), 2-methylthietane ( 2 ), tetrahydrothiophene ( 3 ), and allyl methyl thioether ( 4 ), have been subjected to mass spectrometric analysis in the gas phase, under electron impact (El) and chemical ionization (CI) conditions. The metastable molecular ions M⁺′ generated from 1-4 under EI (70 eV) conditions give distinct patterns of unimolecular fragmentation, thus indicating that isomer interconversion reactions are slower than dissociation (a possible exception, to some extent, is the case of [M₂]⁺′ and [M₂]⁺′). The change of the relative intensities of some prominent peaks with increasing ion lifetime (decomposition within the ion source, the first, and the second field-free regions of the mass spectrometer) is pointed out. Metastable [MH]⁺ ions, generated from 1-4 in chemical ionization experiments with CH₄, all eliminate H₂ and H₂S, although in different relative proportions. In addition to these processes protonated 4 also undergoes loss of C₂H₄ and C₃H₆, likely from a C-protonated structure.     

Organic cluster ions from continuous-flow fast atom bombardment

Cluster ions from fast atom bombardment of liquid alcohols and nitriles were examined using a continuous-flow technique. Protonated molecular M_nH⁺ species are the dominant cluster ions observed in molecules of formula M. The abundances of the M_nH⁺ cluster ions decrease monotonically with increasing n, and within a homologous series the M_nH⁺ abundance diminishes more rapidly for higher molecular mass compounds. Reaction products (ROH)_n(H₂O)H⁺ and (ROH)_n(ROR)H⁺ are observed also in the case of alcohols, and the ion abundances decrease with increasing n. Radiation damage yields fragment ions and ionic alkyl reaction products which are captured in solvent clusters. Semi-empirical molecular orbital methods were used to examine the energetics of cluster ion formation and decomposition pathways. Metastable decomposition processes exhibit only evaporative loss of monomers, with the probability of loss increasing sharply with n. The evaporative ensemble model of Klots was used to predict the cluster size-dependent trends of metastable dissociation processes observed for alcohol and nitrile cluster ions.     

Crystal and Species Engineering with Semi‐Flexible Nitrogen Containing Organic Cations: Generation of [H13O6]+ Ions with the Unfavoured Unbranched Topology by Enclosing Hydrochloric Acid in a Porous Inorganic‐Organic Hybrid Material

The reaction of rhodium(III) chloride trihydrate with 1, 4‐diazacycloheptane in concentrated hydrochloric acid results in the formation of tris(1, 4‐diazoniacycloheptane) hexaaquahydrogen(1+) bis(hexachlororhodate(III)) chloride, [C₅H₁₄N₂]₃[H₁₃O₆][RhCl₆]₂Cl ( 1 ). Dark red crystals of 1 are obtained by diffusion‐controlled crystallization at room temperature. Slow evaporation of the mother liquor over a period of several days yields a few tiny crystals of the bis(1, 4‐diazoniacycloheptane) hexachlororhodate(III) chloride hydrate, [C₅H₁₄N₂]₂[RhCl₆]Cl ˙ 1.75 H₂O ( 2 ), as red thin squared plates. In the context of crystal engineering, compounds 1 and 2 are inorganic‐organic hybrid materials built up from octahedral [RhCl₆]^3‐, simple Cl^‐ and semi‐flexible heterocyclic 1, 4‐diazoniacycloheptane ions, incorporating either the [H₁₃O₆]⁺ and further Cl^‐ ions or portions of simple water molecules. Both compounds crystallize in the space group type P2₁/c. Compound 1 contains isolated [H₁₃O₆]⁺ ions with a linear chain‐like configuration enclosed in the cavities of the inorganic‐organic framework. The presence of a strong central O···H···O hydrogen bond within the [H₁₃O₆]⁺ ions in 1 is confirmed by the short O···O separation of 2.47Å and by characteristic IR absorption bands at 1626 (s), ～ 1250 (m) and 668 (m) cm^‐1. During the thermal decomposition, compound 1 looses at first five equivalents of water and one equivalent of hydrochloric acid in a two‐step process at 37 °C and 67 °C. This is followed by the decomposition of the 1, 4‐diazoniacycloheptane cations and the hexachlororhodate(III) anions, starting at 190 °C and proceeding intensified at 240 °C.     

Mass Spectra of New Heterocycles. XVII. Main Fragmentation Routes of Molecular Ions of 4-Alkoxy-5-amino-3-methylthiophene-2-carbonitriles under Electron and Chemical Ionization

For the first time decomposition was investigated of 4-alkoxy-5-amino-3-methylthiophene-2-carbonitriles under the conditions of electronic (70 eV) and chemical (reagent gas methane) ionization. At the electronic ionization the compounds under study [except for 4-(1-ethoxyethoxy) and 4-(ferrocenylmethoxy) derivatives] form stable molecular ions that decompose mainly by the cleavage of an alkyl radical from the alkoxy-substituent. Further fragmentation of the arising ion [M–Alk]⁺ depends on the substituent nature in the amino group. In the mass spectrum of 4-(ferrocenylmethoxy)-substituted thiophene peaks of the ion [FcCH₂]⁺ and its fragmentation products prevail. In the mass spectra of chemical ionization predominant peaks belong to ions M^+·, [M + H]⁺ and [M + C₂H₅]⁺, and fragment ions are absent.     

A comparison of the unimolecular decomposition pathways of some C7 and C8 ions in the gas phase

[CnH_2n?3]⁺ and [C_nH_2n?4]⁺·(n = 7, 8) ions have been generated in the mass spectrometer from C_nH_2n?3 Br (n = 7, 8) precursors and from two steroids. The relative abundances of competing ‘metastable transitionss’ indicate (partial) isomerization to a common structure (or mixture of structures) prior to decomposition in most examples of all four types of ions. In contrast, [C₈H₁₀O]⁺· and [C₈H₁₂O]⁺· ions, generated from different sources as molecular ions and by fragmentation of steroids, do not decompose through common-intermediates.     

Homo- and heterometallic complexes based on polytopic carboxylic acid: synthesis,characterization, and property

Two heterometallic [K₄M₄(HL)₄(H₂O)₁₂] (M=Co (1), Ni (2)) and two homometallic [M₂L(H₂O)₇]?·?2H₂O ((M=Co (3), Ni (4)) (H₄L?=?(2-(bis(carboxymethyl)amino) terephthalic acid) have been synthesized and characterized by elemental analysis, FT-IR spectrum, and single-crystal X-ray diffraction. The isomorphous 1 and 2 contain K⁺ and M²⁺, in which K⁺ were bridged with M²⁺ through μ-HL^3? and μ-H₂O, leading to 2-D layer structures. The isomorphous 3 and 4 show homometallic binuclear complexes with μ-HL^3? as the bridging ligand. Various H-bonds including different H-bond helical chains form, by which 3 and 4 assemble into 3-D supramolecular frameworks. TG analysis indicates that the decomposition temperatures are [K₄M₄(HL)₄(H₂O)₁₂] (1)?>?[M₂L(H₂O)₇]?·?2H₂O (3)?>?H₄L.     

Mass spectrometry of heterocyclic compounds VIII–electron-impact-induced fragmentation of 1,2-diphenyl-pyrazolidine-3,5-dione and some 4-substituted derivatives

The mass spectra of 1,2-diphenyl-pyrazolidine-3,5-dione and twenty-one 4-substituted derivatives are reported. Their fragmentation patterns have been studied by deuterium labelling, exact mass measurements, metastable studies by the defocusing technique and low energy spectra. Hydrogen rearrangements from the 4-position of the heterocycle and/or from the ß-position of the 4-substituent groups, lead to the main primary fragment ions [C₁₂H₁₁N₂]⁺ (m/e 183) as shown by the metastables. The 4,4-d₂ derivative shows an appreciable isotope effect even for molecular ions decomposing in the ion source. By comparison with the metastable abundances of competitive reactions, the molecular ions (m/e 252) of the 4-unsubstituted compound appear to be structurally different from the corresponding m/e 252 fragment ions formed from 4-derivatives by the loss of 4-substituent with H rearrangement. If only vinylic or aromatic hydrogen atoms are present, primary cleavage of the heterocyclic ring occurs with loss of OH·, C₃O₂ and C₃HO₂. Important rearrangements leading to elimination of C₆H₆N and C₆H₇N are typical for unsaturated substituents on position four having allylic hydrogen atoms. Fragment ions, identical to molecular ions of some compounds discussed here, are obtained by electron-impact and/or thermal decompostion of some complex compounds containing more than one 1,2-diphenyl-pyrazolidine-3,5-dione system. The [C₆H₅N₂]⁺ (m/e 105) and [C₆H₅]⁺ (m/e 77) ions are common fragments of all the title compounds. Any hydrogen scrambling reactions between phenyl and heterocycle or 4-substituent groups can be excluded.     

Ring expansion and hydrogen scrambling in the molecular ion of 3-methylthiophene

The ratio [M ? D]/{[M-D] + [M ? H]} in the 70 eV mass spectra of six deuterated 3-methylthiophenes has been determined. From these values the mole fractions of the molecular ions that lose hydrogen atoms specifically from the various positions of the molecule were calculated, as well as the mole fraction in which the hydrogen atoms are fully scrambled before hydrogen elimination. It appears that hydrogen atoms are mainly lost from a fully scrambled [C₅H₆S]⁺· ion and from the α-position of the original molecular ion. A deuterium isotope effect of 1·60 to 1·72 was calculated for the hydrogen elimination. The reaction was also studied at low electron energies. In order to determine the degree of scrambling in the [C₅H₅S]⁺ ions, some decomposition reactions of this ion were investigated.     

Temperature Dependence of the Isobutane Chemical Ionization Mass Spectra of Open-chain and Cyclic Alcohols; Structural,Stereochemical and Molecular-Size Effects. A reevaluation of the isobutane chemical ionization of alcohols

The temperature dependence of the isobutane chemical ionization (CI.) mass spectra of 54 open-chain, cyclic and unsaturated C₅- to C₁₀-alcohols was studied at temperatures ranging from 60 to 250°, and enthalpy changes were calculated for the corresponding main reactions of typical alcohols. The CI. reactivity is controlled by the temperature and the substrate structure as usual, and in addition, by the molecular size. The combination of thermal, structural and substrate-size effects leads to the following main conclusions. At low-reactivity conditions, i.e. at 150° or less, the alcohols with less than 11 C-atoms give four distinct types of spectra, with (M – OH)⁺ usually as the base peak. The characteristic ions are MC₄H₉⁺ and (M – H)⁺ for primary, MH⁺ and (MC₄H₉ – H₂O)⁺ for secondary, (MC₄H₉ – H₂O)⁺ for tertiary and allyl-type alcohols. Configurational assignments of stereoisomeric alcohols are also possible, by means of steric compression and shielding effects. The MH⁺/(M – OH)⁺ ratio in the spectra of epimeric methylcyclohexanols is at least 3 to 4 times higher for the isomers with mainly axial OH-group conformation compared to the equatorial isomers. Stereospecific (M - H)⁺ ions are apparently formed from trans-2-methylcyclopentanol and endo-norbornan-2-ol by a favorable abstraction of the unshielded H(α)-atoms versus normal behavior of the other epimers. While the spectra recorded at 200° show almost exclusively (M – OH)⁺ ions, those at 250° give nevertheless some C-skeleton information through the temperature dependent decomposition of the (M – OH)⁺ ions.     

Synthesis and crystal structures of 3D supramolecular compounds: [ M (4,4′-bipy)2(H2O)4] · (4,4′-bipy)2 · (3,5-daba)2 · 8H2O ( M =Zn,Mn)

Two new supramolecular compounds [M(4,4′-bipy)₂ (H₂O)₄] ·?(4,4′-bipy)₂ ·?(3,5-daba)₂ ·?8H₂O (M=Zn(1) or Mn(2), 4,4′-bipy =?4,4′-bipyridine, 3,5-daba =?3,5-diaminobenzoic acid anion) were synthesized and characterized by elemental analysis and X-ray crystal diffraction. In [M(4,4′-bipy)₂(H₂O)₄]²⁺, the M(II) is coordinated by two nitrogen atoms from two 4,4′-bipy molecules and four oxygen atoms from four waters to form an octahedral configuration. There exist uncoordinated 4,4′-bipy molecules, 3,5-diaminobenzolate counterions and water guests in the compounds. The 3D structures of the title supramolecular compounds are constructed by rich hydrogen bonds among [M(4,4′-bipy)₂(H₂O)₄]²⁺, uncoordinated 4,4′-bipy molecules, water molecules and 3,5-daba, containing a diverting hexa-member water ring.     

Mass spectra of new heterocycles: XI. Fragmentation of 5-(methylsulfanyl)-1-[2-(vinyloxy)ethyl]-1H-pyrrol-2-amines under electron impact and chemical ionization

Fragmentation patterns of the molecular ions of 5-(methylsulfanyl)-1-[2-(vinyloxy)ethyl]-1H-pyrrol- 2-amines generated by electron impact (70 eV) and chemical ionization (methane as reagent gas) were studied for the first time. The electron impact mass spectra of all the examined compounds showed abundant molecular ions whose subsequent fragmentation followed three main pathways: elimination of EtS radical, elimination of methyl radical from the MeS group, and cleavage of the C-N and/or C-C bonds which is accompanied by rearrangement processes. Further decomposition of the [M - EtS]⁺ ion is determined by the structure of the amino group. The chemical ionization mass spectra displayed strong molecular and [M + H]⁺ ion peaks together with representative series of fragment ion peaks. Unlike electron impact, the main decomposition pathway under chemical ionization is elimination of methylsulfanyl radical from the [M + H]⁺ ion to give abundant [M + H — MeS]⁺ ion.     

Supramolecular synthesis based on piperidone derivatives and pharmaceutically acceptable co‐formers

The target complexes, bis{(E,E)‐3,5‐bis[4‐(diethylamino)benzylidene]‐4‐oxopiperidinium} butanedioate, 2C₂₇H₃₆N₃O⁺·C₄H₄O₄²⁻, (II), and bis{(E,E)‐3,5‐bis[4‐(diethylamino)benzylidene]‐4‐oxopiperidinium} decanedioate, 2C₂₇H₃₆N₃O⁺·C₁₀H₁₆O₄²⁻, (III), were obtained by solvent‐mediated crystallization of the active pharmaceutical ingredient (API) (E,E)‐3,5‐bis[4‐(diethylamino)benzylidene]‐4‐piperidone and pharmaceutically acceptable dicarboxylic (succinic and sebacic) acids from ethanol solution. They have been characterized by melting point, IR spectroscopy and single‐crystal X‐ray diffraction. For the sake of comparison, the structure of the starting API, (E,E)‐3,5‐bis[4‐(diethylamino)benzylidene]‐4‐piperidone methanol monosolvate, C₂₇H₃₅N₃O·CH₄O, (I), has also been studied. Compounds (II) and (III) represent salts containing H‐shaped centrosymmetric hydrogen‐bonded synthons, which are built from two parallel piperidinium cations and a bridging dicarboxylate dianion. In both (II) and (III), the dicarboxylate dianion resides on an inversion centre. The two cations and dianion within the H‐shaped synthon are linked by two strong intermolecular N⁺—H...⁻OOC hydrogen bonds. The crystal structure of (II) includes two crystallographically independent formula units, A and B. The cation geometries of units A and B are different. The main N—C₆H₄—C=C—C(=O)—C=C—C₆H₄—N backbone of cation A has a C‐shaped conformation, while that of cation B adopts an S‐shaped conformation. The same main backbone of the cation in (III) is practically planar. In the crystal structures of both (II) and (III), intermolecular N⁺—H...O=C hydrogen bonds between different H‐shaped synthons further consolidate the crystal packing, forming columns in the [100] and [10] directions, respectively. Salts (II) and (III) possess increased aqueous solubility compared with the original API and thus enhance the bioavailability of the API.     

Electron impact studies—LXVII. The mass spectra of alkyl-1,3-dithianes

The mass spectra of 1,3-dithiane, 2-methyl- and 2,2-dimethyl-1,3-dithiane have been studied by ²H labelling and metastable defocusing. The various molecular ions eliminate S₂H. to produce the ions [C₄H₇]⁺, [C₅H₉]⁺ and [C₆H₁₁]⁺ respectively, each of which scramble the hydrogens either before or accompanying further decomposition. Other processes are complex, but parallel those already reported for 2-aryl-1,3-dithianes.     

New pharmaceutical salts containing pyridoxine

Two mixed crystals were obtained by crystallizing the active pharmaceutical ingredient pyridoxine [systematic name: 4,5‐bis(hydroxymethyl)‐2‐methylpyridin‐3‐ol, PN] with (E )‐3‐(4‐hydroxy‐3‐methoxyphenyl)prop‐2‐enoic acid (ferulic acid) and 4‐hydroxy‐3,5‐dimethoxybenzoic acid (syringic acid). PN and the coformers crystallize in the form of pharmaceutical salts in a 1:1 stoichiometric ratio, namely 3‐hydroxy‐4,5‐bis(hydroxymethyl)‐2‐methylpyridin‐1‐ium (E )‐3‐(4‐hydroxy‐3‐methoxyphenyl)prop‐2‐enoate, C₈H₁₂NO₃⁺·C₉H₉O₅⁻, and 3‐hydroxy‐4,5‐bis(hydroxymethyl)‐2‐methylpyridin‐1‐ium 4‐hydroxy‐3,5‐dimethoxybenzoate monohydrate, C₈H₁₂NO₃⁺·C₁₀H₁₁O₅⁻·H₂O, the proton exchange between PN and the acidic partner being supported by the differences of the pK _a values of the two components and by the C—O bond lengths of the carboxylate groups. Besides complex hydrogen‐bonding networks, π–π interactions between aromatic moieties have been found to be important for the packing architecture in both crystals. Hirshfeld surface analysis was used to explore the intermolecular interactions in detail and compare them with the interactions found in similar pyridoxine/carboxylic acid salts.     

The significance of field ionisation kinetics to ion structure: Isomerisation and decompostition of [C4H8]+· radical ions

The kinetics of formation of [C₃H₅]⁺[M ? CH₃]⁺, [C₃H₄]⁺·[M ? CH₄]⁺· and [C₂H₄]⁺·[M ? C₂H₄]⁺· from but-1-ene, cis- and trans-but-2-ene, 2-methylpropene, cyclobutane and methylcyclopropance following field ionisation have been determined as a function of time 20 (or 30) picoseconds to 1 nanosecond and at two points in the microsecond time-frame. The results are consistent with the supposition that at the shortest accessible times (20 to 30 picoseconds) the structure of the [C₄H₈]⁺· molecular ion qualitatively resembles that of its neutral precursor, but suggest that prior to decomposition within nanoseconds the various molecular ions (excepting cyclobutane where the processes are slower) attain a common structure or mixture of structures. Reaction pathways of the presumed known ion structures are delineated from the nature of decompostion at the shortest times.     

Electron-impact studies XCV–skeletal rearrangement fragments in the mass spectra of 3,5- diphenylisoxazole and 3,5- diphenylpyrazole

The ion [C₁₃H₉]⁺ (m/e 165) is produced from the molecular ion of 3,5-diphenylisoxazole by the process [M ? CO ? H₂CN·] and [M ? CO ? HCN ? H·] and from that of 3,5-diphenyl-pyrazole by the eliminations [M ? N₂H· ? C₂H₂]. These processes have been studied by ²H and ¹³C labelling. A correlation between photochemical, thermal and electron-impact decompostions is noted for 3,5-diphenylisoxazole.     

Mass spectra of new heterocycles: XVI. Electron impact study of alkyl 5-aminothiophene-2-carboxylates

Electron impact mass spectra of alkyl 4-alkoxy-5-amino-3-methylthiophene-2-carboxylates were studied for the first time. These compounds, except for 4-(1-ethoxyethoxy) and 4-(ferrocenylmethoxy) derivatives, give rise to a stable molecular ion whose decomposition follows three pathways. The main fragmentation pathway of the molecular ion is elimination of alkyl radical from the 4-alkoxy group, the second pathway involves expulsion of alkoxy group from the ester moiety, and the third pathway is decomposition of the thiophene ring. The molecular ions of 4-(1-ethoxyethoxy)thiophenes decompose mainly via elimination of ethyl vinyl ether molecule with formation of [M–VinOEt]⁺ · odd-electron ion, and fragmentation of the latter follows general pathways. In the mass spectra of 4-(ferrocenylmethoxy)thiophenes the most abundant are ferrocenylmethyl ion with m/z 199 (I _rel 100%) and fragment ions derived therefrom.     

Mass spectra of new heterocycles: XII. Main fragmentation pathways of the molecular ions of 5-methylsulfanyl-1-vinyl-1H-pyrrol-2-amines under electron impact and chemical ionization

Fragmentation patterns of 5-methylsulfanyl-1-vinyl-1H-pyrrol-2-amines under electron impact (70 eV) and chemical ionization (methane as reactant gas) were studied for the first time. The electron impact mass spectra of all the examined compounds contained a strong peak of molecular ion which decomposed along four pathways. Two pathways involved cleavage of the C-S bonds with elimination of methyl (major) and MeS radicals (minor), and the two others, decomposition of the pyrrole ring. The chemical ionization mass spectra displayed strong molecular, [M + H]⁺, and odd-electron [M + H ? SMe]⁺ ion peaks. N,N-Dimethyl-5-methylsulfanyl-4-phenyl-1-vinyl-1H-pyrrol-2-amine under chemical ionization with methane as reactant gas characteristically decomposed with formation of [M ? C₄H₉N]⁺ as the only fragment ion.     

The Cu(II) complexes with bis(pyrazole-1-yl)methane and its derivatives: Synthesis,crystal structure,and magnetic properties

The procedures for the synthesis of the Cu(II) complexes with bis(pyrazole-1-yl)methane (L¹), bis(3,5-dimethyl-4-bromopyrazole-1-yl)methane (L²), and bis(3,5-dimethyl-4-iodopyrazole-1-yl)methane (L³) of the composition Cu₂(L¹)₂Br₄ (I), Cu₂(L²)₂Cl₄ (II), Cu(L³)(NO₃)₂ (III), and Cu(L³)(H₂O)(NO₃)₂ · 2H₂O (IV) were developed. The organic ligands in the above complexes are coordinated to Cu(II) in a bidentate cyclic type through the N(2), N(2′) atoms of the pyrazole rings. The molecular and crystal structures of L², L³, II, III, and IV were determined by X-ray diffraction. The study of the μ_eff(T) function in a temperature interval 2–300 K showed that compound I, which exhibited ferromagnetic exchange interactions in the chains, undergoes transition to antiferromagnetic state with weak ferromagnetism. The exchange antiferromagnetic interactions predominate in compound II.