3,4‐Di‐2‐pyridyl‐1,2,5‐oxadiazole and its perchlorate salt

In 3,4‐di‐2‐pyridyl‐1,2,5‐oxadiazole (dpo), C₁₂H₈N₄O, each mol­ecule resides on a twofold axis and inter­acts with eight neighbours via four C—H⋯N and four C—H⋯O inter­actions to generate a three‐dimensional hydrogen‐bonded architecture. In the perchlorate analogue, 2‐[3‐(2‐pyrid­yl)‐1,2,5‐oxadiazol‐4‐yl]pyridinium perchlorate, C₁₂H₉N₄O⁺·ClO₄⁻ or [Hdpo]ClO₄, the [Hdpo]⁺ cation is bisected by a crystallographic mirror plane, and the additional H atom in the cation is shared by the two pyridyl N atoms to form a symmetrical intra­molecular N⋯H⋯N hydrogen bond. The cations and perchlorate anions are linked through C—H⋯O hydrogen bonds and π–π stacking inter­actions to form one‐dimensional tubes along the b‐axis direction.     

(2‐Hydroxy­ethyl)­hydrazinium(2+) dichloride

The crystal structure of the title compound, C₂H₁₀N₂O²⁺·2Cl⁻, is built up from one 2‐hydroxy­ethyl­hydrazinium(2+) cation and two Cl⁻ anions. The mol­ecular structure is stabilized by O—H⋯Cl and N—H⋯Cl hydrogen bonds. The crystal structure is stabilized by one N—H⋯O and three N—H⋯Cl inter­actions, and the three‐dimensional network of hydrogen bonds stabilizes the crystal packing. All five hydrazinium H atoms are involved in hydrogen bonds to Cl⁻ anions. The Cl⋯H contact distances range from 2.122 (15) to 2.809 (14) Å.     

1‐((E)‐{(1R,2R)‐2‐[(E)‐(2‐Hydr­oxy‐1‐naphth­yl)methyl­eneamino]cyclo­hexyl}iminiometh­yl)naphthalen‐2‐olate: a Schiff base compound having both OH and NH character

The title Schiff base compound, C₂₈H₂₆N₂O₂, possesses both OH and NH tautomeric character in its mol­ecular structure. While the OH side of the compound is described as an inter­mediate state, its NH side adopts a predominantly zwitterionic form. The mol­ecular structure of the compound is stabilized by both N⁺—H⋯O⁻ and O—H⋯N intra­molecular hydrogen bonds. There are two weak C—H⋯O hydrogen bonds leading to polymeric chains of topology C(5) and C(13) running along the b axis of the unit cell. In addition, inter­molecular C—H⋯π inter­actions serve to stabilize the extended structure.     

l‐Argininamidium bis­(hydrogen­squarate)

Cations and anions of the title compound {systematic name: 1‐[4‐(amino­carbonyl)butyl]guanidinium bis­(hydrogen­squarate)}, C₆H₁₇N₅O²⁺·2C₄HO₄⁻, are connected into a three‐dimensional network by inter­molecular N—H⋯O hydrogen bonds between the l ‐argininamidium ammonium, amide and guanidinium functions and the hydrogensquarate carbonyl O atoms. The independent hydrogensquarate monoanions are linked into dimers by pairs of O—H⋯O′ hydrogen bonds.     

The perchlorate salt of the novel diprotonated dinucleating ligand 1,3‐bis­{[2‐(2‐pyridinio)eth­yl][2‐(2‐pyrid­yl)eth­yl]amino}benzene

In the title salt, 1,3‐bis­{[2‐(2‐pyridinio)eth­yl][2‐(2‐pyrid­yl)ethyl]amino}benzene diperchlorate dihydrate, C₃₄H₃₈N₆²⁺·2ClO₄⁻·2H₂O, the cation contains two ethyl­pyrid­yl and two ethyl­pyridinium pendant pairs anchored to the two N atoms of 1,3‐phenyl­enediamine. The pyrid­yl and pyridinium N atoms are flanked by a mol­ecule of water through strong hydrogen‐bonding inter­actions [N—H⋯O = 2.762 (6) and 2.758 (6) Å, and O—H⋯N = 2.834 (6) and 2.839 (6) Å]. The water mol­ecules have weak hydrogen‐bonding inter­actions with the perchlorate anions as well. One of the perchlorate anions is severely disordered.     

N‐(2,4‐Dimethoxy­benzyl­idene­amino)­guanidinium dihydrogenphosphate

In the asymmetric unit of the title compound, C₁₀H₁₅N₄O₂⁺·H₂PO₄⁻, there are two protonated amino­guanidinium cations and two dihydrogenphosphate anions. The positive charge on the protonated amidine group is delocalized over the three C—N bonds in a manner similar to that found in guanidinium salts. The amino­guanidinium cations are found to be the E‐isomer structures. Intra­molecular inter­actions of the N—H⋯N type are observed, leading to the formation of five‐membered rings. Extensive networks of O—H⋯O, N—H⋯O and C—H⋯O hydrogen bonds stabilize the three‐dimensional network. In the crystal structure, π–π inter­actions between the benzene rings, with a distance of 3.778 (2) Å between the ring centroids, also affect the packing of the mol­ecules.     

2,2′‐(Iminodimethylene)bis(1H‐benzimidazolium)(1+) chloride

The title compound, C₁₆H₁₆N₅⁺·Cl⁻ (nbbH⁺·Cl⁻), displays N—H⋯N, N—H⋯Cl and π–π inter­actions in the crystal packing. The Cl⁻ anion is chelated by the nbbH⁺ cation via two N—H⋯Cl hydrogen bonds. Inter‐ion N—H⋯N and N—H⋯Cl hydrogen bonds link ions related by 2₁ screw axes into chains along the c axis. These chains are further linked by glide‐plane operations to generate a three‐dimensional network, which is additionally stabilized by inter­chain π–π inter­actions.     

2,2′‐Bipyridinium(1+) bromide monohydrate

In the crystal structure of 2,2′‐bipyridinium(1+) bromide monohydrate, C₁₀H₉N₂⁺·Br⁻·H₂O, the cation has a cisoid conformation with an intramolecular N—H⋯N hydrogen bond. The cation also forms an N—H⋯O hydrogen bond to an adjacent water mol­ecule, which in turn forms O—H⋯Br⁻ hydrogen bonds to adjacent Br⁻ anions. In this way, a chain is formed extending along the b axis. Additional interactions (C—H⋯Br⁻ and π–π) serve to stabilize the structure further.     

Hydro­gen‐bonding patterns in 2‐amino‐4,6‐di­methyl­pyrimidinium hydrogen sulfate

In the title compound, C₆H₁₀N₃⁺·HSO₄⁻, the asymmetric unit consists of a hydrogen sulfate anion and a 2‐amino‐4,6‐di­methyl­pyrimidinium cation. The hydrogen sulfate anions self‐assemble through O—H⋯O hydrogen bonds, forming supramolecular chains along the b axis, while the organic cations form base pairs via N—H⋯N hydrogen bonds. The amino­pyrimidinium cations join to the sulfate anions via a pair of hydrogen bonds donated from the pyrimidinium protonation site and from the exo amine group cis to the protonated site.     

Solid‐state architecture of saccharin salts of some diamines

Hydrazinium saccharinate, N₂H₅⁺·C₇H₄NO₃S⁻, crystallizes in a 1:1 ratio, while ethyl­ene­diaminium bis­(saccharinate), C₂H₁₀N₂²⁺·2C₇H₄NO₃S⁻, and butane‐1,4‐diaminium bis­(sac­charin­ate), C₄H₁₄N₂²⁺·2C₇H₄NO₃S⁻, form in a 1:2 cation–anion stoichiometry. The structures contain many strong hydrogen bonds of the N⁺—H⋯N⁻, N⁺—H⋯O, N—H⋯O and N—H⋯N types, with auxiliary C—H⋯O inter­actions.     

An oxonium hydrogen sulfate of 3a,6a‐diphenyl­glycoluril

In the title compound, (5‐oxo‐3a,6a‐diphenyl­perhydro­imidazo[4,5‐d]imidazol‐2‐ylidene)oxonium hydrogen sulfate, C₁₆H₁₅N₄O₂⁺·HSO₄⁻, the asymmetric unit contains a hydrogen sulfate anion and a 3a,6a‐diphenyl­glycoluril oxonium cation. The hydrogen sulfate anion is joined to the oxonium cation via a strong O—H⋯O hydrogen bond (H⋯O = 1.69 Å). The crystal packing is mainly dominated by inter­actions involving the hydrogen sulfate anion. The diphenyl­glycoluril oxonium cations also self‐assemble through N—H⋯O hydrogen bonds, forming mol­ecular chains along the [001] vector. Four intra­molecular C—H⋯N hydrogen bonds are observed, having an S(5) motif.     

Bis(μ‐acetato)(μ‐2,6‐bis­{[(2‐hydroxy­ethyl)(2‐pyridylmeth­yl)amino]meth­yl}‐4‐methyl­phenolato)dinickel(II) hexa­fluoro­phosphate hemihydrate

The asymmetric unit of the title compound, [Ni₂(C₂₅H₃₁N₄O₃)(C₂H₃O₂)₂]PF₆·0.5H₂O, consists of two dinuclear nickel cations, two hexa­fluoro­phosphate anions and one water mol­ecule of crystallization. Within each cation, the Ni atoms are bridged by two exogenous acetate groups and an endogenous cresol O atom of a phenolate‐based `end‐off' compartmental ligand that possesses two pendant chelating arms attached to the ortho positions of the phenol ring. Each Ni atom is six‐coordinate with a slightly distorted octa­hedral geometry. The two symmetry‐independent cations are linked into a dimeric unit through O—H⋯O hydrogen bonds. Additional O—H⋯O, C—H⋯F and C—H⋯O inter­molecular inter­actions link all of the units in the structure into a three‐dimensional framework.     

Proton‐bifurcated C—H⋯(O,O) hydrogen bonds in 2,3‐dichloro‐6‐nitro­benzyl­aminium chloride

In the crystal structure of the title salt, C₇H₇Cl₂N₂O₂⁺·Cl⁻, the chloride anions participate in extensive hydrogen bonding with the aminium cations and indirectly link the mol­ecules through multiple N⁺—H⋯Cl⁻ salt bridges. There are two independent mol­ecules in the asymmetric unit, related by a pseudo‐inversion center. The direct inter­molecular coupling is established by C—H⋯O, C—H⋯Cl and C—Cl⋯Cl⁻ inter­actions. A rare three‐center (donor bifurcated) C—H⋯(O,O) hydrogen bond is observed between the methyl­ene and nitro groups, with a side‐on intra­molecular component of closed‐ring type and a head‐on inter­molecular component.     

1,4‐Dimethyl‐1,4‐diazo­nia­bicyclo­[2.2.2]octane diiodide acetonitrile solvate

In the crystal structure of the title compound, C₈H₁₈N₂²⁺·2I⁻·CH₃CN, the dication lies on a mirror plane containing the mol­ecular dication threefold axis. The structure displays C—H⋯I inter­actions between H atoms of the 1,4‐dimethyl‐1,4‐diazo­nia­bicyclo­[2.2.2]octane dication and the iodide anions. The H⋯I distances are in the range 2.96–3.18 (4) Å. The dications pack forming channels along the b axis, which contain the iodide anions and acetonitrile solvent mol­ecules.     

Three structures containing (E)‐1,2‐bis­(benzimidazol‐2‐yl)ethene groups

Two of the title compounds, namely (E)‐1,2‐bis­(1‐methyl­benzimidazol‐2‐yl)ethene, C₁₈H₁₆N₄, (Ib), and (E)‐1,2‐bis­(1‐ethyl­benzimidazol‐2‐yl)ethene, C₂₀H₂₀N₄, (Ic), consist of centrosymmetric trans‐bis­(1‐alkyl­benzimidazol‐2‐yl)ethene mol­ecules, while 3‐eth­yl‐2‐[(E)‐2‐(1‐ethyl­benzimidazol‐2‐yl)­ethen­yl]benzimidazol‐1‐ium perchlorate, C₂₀H₂₁N₄⁺·ClO₄⁻, (II), contains the monoprotonated analogue of compound (Ic). In the three structures, the benzimidazole and benzimidazolium moieties are essentially planar; the geometric parameters for the ethene linkages and their bonds to the aromatic groups are consistent with double and single bonds, respectively, implying little, if any, conjugation of the central C=C bonds with the nitro­gen‐containing rings. The C—N bond lengths in the N=C—N part of the benzimidazole groups differ and are consistent with localized imine C=N and amine C—N linkages in (Ib) and (Ic); in contrast, the corresponding distances in the benzimidazolium cation are equal in (II), consistent with electron delocalization resulting from protonation of the amine N atom. Crystals of (Ib) and (Ic) contain columns of parallel mol­ecules, which are linked by edge‐over‐edge C—H⋯π overlap. The columns are linked to one another by C—H⋯π inter­actions and, in the case of (Ib), C—H⋯N hydrogen bonds. Crystals of (II) contain layers of monocations linked by π–π inter­actions and separated by both perchlorate anions and the protruding eth­yl groups; the cations and anions are linked by N—H⋯O hydrogen bonds.     

l‐Leucinium perchlorate

Crystals of l ‐leucinium perchlorate, C₆H₁₄NO₂⁺·ClO₄⁻, are built up from protonated l ‐leucinium cations and perchlorate anions. l ‐Leucinium cations related by a twofold screw axis are inter­connected by N—H⋯O hydrogen bonds into zigzag chains parallel to [010]. The O atoms of the perchlorate anions act as acceptors of hydrogen bonds that link the l ‐leucinium chains into separated but inter­acting two‐dimensional layers parallel to (001). Since the title compound crystallizes in a non‐centrosymmetric space group, it can be useful as a material for non‐linear optics. The efficiency of second harmonic generation is about twice that of K₂[HPO₄].     

Bis(6‐thioxo‐1,6‐dihydro­purinium) tetra­chloro­zincate(II)

The title salt, (C₅H₅N₄S)₂[ZnCl₄], consists of two 6‐thioxo‐1,6‐dihydro­purinium (6mpH₂⁺) cations (A and B) and a tetra­chloro­zincate anion, which are held together by N—H⋯Cl and C—H⋯Cl inter­actions. There is an anion–π inter­action between one Cl atom of the [ZnCl₄]⁻ anion and the pyrimidine ring of the 6mpH₂⁺(B) cation. Inter­molecular π–π stacking inter­actions allow 6mpH₂⁺(A) cations to form anti­parallel pairs. One inter­esting structural feature is the double N—H⋯N inter­molecular hydrogen bonds between two 6mpH₂⁺(A) cations. This kind of inter­action, mimicking that of natural nucleobases, can be very valuable in designing new therapeutic purine derivatives.     

Bis(2‐amino‐3,5‐dibromo‐4,6‐dimethyl­pyridinium) hexa­bromido­stannate(IV)

In the title compound, (C₇H₉Br₂N₂)₂[SnBr₆], the cations and centrosymmetric anions are stacked in alternating layers that show no significant inter­molecular inter­actions within each stack. Extensive cation⋯[SnBr₆]²⁻ inter­actions are found, represented by short Br⋯Br inter­actions, along with different Br⋯HN (pyridine and amine) and weaker Br⋯HCH₂ hydrogen‐bonding motifs.     

Isomorphous crystals of strychninium 4‐chloro­benzoate and strychninium 4‐nitro­benzoate

In strychninium 4‐chloro­benzoate, C₂₁H₂₃N₂O₂⁺·C₇H₄ClO₂⁻, (I), and strychninium 4‐nitro­benzoate, C₂₁H₂₃N₂O₂⁺·C₇H₄NO₄⁻, (II), the strychninium cations form pillars stabilized by C—H⋯O and C—H⋯π hydrogen bonds. Channels between the pillars are occupied by anions linked to one another by C—H⋯π hydrogen bonds. The cations and anions are linked by ionic N—H⁺⋯O⁻ and C—H⋯X hydrogen bonds, where X = O, π and Cl in (I), and O and π in (II).     

The diprotonated 2,2‐(propane‐1,3‐di­yl)bis­(1,1,3,3‐tetra­methyl­guanidinium) cation: packing and conformational changes

Subject to packing with different anions, the title cation undergoes various conformational changes with significantly different N—C—C—C torsion angles, as well as different angles between the NCN₂ guanidine planes. The 2,2‐(propane‐1,3‐di­yl)bis­(1,1,3,3‐tetra­methyl­guanidinium) salts reported here, viz. the dibromide, C₁₃H₃₂N₆²⁺·2Br⁻, the tetra­phenyl­borate chloride, C₁₃H₃₂N₆²⁺·C₂₄H₂₀B⁻·Cl⁻, the tetra­chloro­mercurate, (C₁₃H₃₂N₆)[HgCl₄], and the bis­(trifluoro­methanesulfonate), C₁₃H₃₂N₆²⁺·2CF₃SO₃⁻, are dominated by strong inter­molecular N—H⋯X hydrogen bonds, which form different packing patterns.