Si‐Doped B12N12 Nanocage as an Adsorbent for Dissociation of N2O to N2 Molecule

Adsorption of N₂O molecule by using density functional theory calculations at the B3LYP/6–31G* level onto pristine and Si‐doped B₁₂N₁₂ nanocage in terms of energetic, geometric, and electronic properties was investigated. The results of calculations showed that the N₂O molecule is physically adsorbed on the pristine and Si‐doped B₁₂N₁₂ (Si_N) models, releasing energies in the range of –1.13 to –2.02 kcal mol⁻¹. It was found that the electronic properties of the models have not changed significantly upon the N₂O adsorption. On the other hand, the adsorption energy of N₂O on the Si‐doped B₁₂N₁₂ (Si_B model) was about –67.20 kcal mol⁻¹and the natural bond orbital charge of 0.58|e| is transferred from the nanocage to the N₂O molecule. In the configuration, the O atom of N₂O molecule is bonded to the Si atom of the nanocage, so that an N₂ molecule escapes from the wall of the nanocage. The results showed that the Si_B model can be an adsorbent for dissociation of the N₂O molecule.     

BN Nanotube Serving as a Gas Chemical Sensor for N<Subscript>2</Subscript>O by Parallel Electric Field

Density functional theory calculations were performed to understand the electronic properties of C₂₄, B₁₂N₁₂, B₁₂P₁₂, and (6, 0) BNNT interacted with N₂O molecule in the presence and absence of an external electric field using the B3LYP method and 6-31G** basis set. The adsorption of N₂O from O-side on the surface of (6, 0) BNNT has high sensitivity in comparison with B₁₂N₁₂ nano-cage. The adsorption energy of N₂O (O-side) on the sidewalls of B₁₂N₁₂ and BNNT in the presence of an electric field are ?21.01 and ?15.48 kJ mol^?1, respectively. Our results suggest that in the presence of an electric field, the B₁₂N₁₂ nano-cage is the more energetically notable upon the N₂O adsorption than (6, 0) BNNT, C₂₄, and B₁₂P₁₂. Whereas, our results indicate that the electronic property of BNNT is more sensitive to N₂O molecule at the presence of an electric field than B₁₂N₁₂ nano-cage. It is anticipated that BNNT could be a favorable gas sensor for the detection of N₂O molecule.     

Adsorption of molecular hydrogen on inorganometallic complexes B<Subscript>2</Subscript>H<Subscript>4</Subscript>M (M=Li,Be, Sc,Ti, V)

Molecular interaction between hydrogen molecules and B₂H₄M (M=Li, Be, Sc, Ti, V) complexes has been studied using the DFT method (M06 functional) and 6-311++G** basis set. The hydrogen uptake capacity of the complexes considered is higher than the target set by the US Department of Energy (5.5 wt% by 2020). The metal atom bound strongly to the B₂H₄ substrate. Adsorption of molecular hydrogen on Be-, Ti-, and V-decorated complexes is thermodynamically possible for all the pressures and temperatures considered whereas it is unfavorable for Li-decorated complexes for all the pressure and temperatures. For the Sc-doped complexes, adsorption of molecular hydrogen is favorable below 330 K and entire pressure range considered. All the H₂ adsorbed complexes are kinetically stable. For all the complexes, the interaction between the inorganometallic complexes and the H₂ molecules adsorbed is attractive whereas that between adsorbed H₂ molecules is repulsive. We have also performed molecular dynamics simulations to confirm the same number of H₂ molecule adsorption from the simulations and DFT calculations.     

Transition metal atom adsorptions on a boron nitride nanocage

We have applied density functional theory within B3LYP and M05 functionals to investigate the chemical functionalization of B₁₂N₁₂ nanocage with 3d transition metal (TM) atoms. Main focuses have been placed on configurations corresponding to the located minima of the adsorbates, corresponding adsorption energies, and the modified electronic properties of the cage. It was shown that there is linear correlation between the adsorption energies of the B3LYP and M05 as the results of M05 are higher than those of B3LYP, about 0.52 eV. Based on calculations, the most stable adsorption site is over the bond shared by a four- and a six-membered ring in the outer surface of cluster, in most cases. Based on the M05 results, the adsorption energies of the Sc, Ti, V, Co, and Fe are relatively high (>1.51 eV) and those of Mn, Ni, and Cu calculated to be in the range of 1.00–1.22 eV. The Cr atom forms a weak bond with a boron atom of the B₁₂N₁₂ cluster, while Zn atom cannot be chemically adsorbed. Charge transfer from metals to cluster ascertained that the B₁₂N₁₂ plays as an electron-trapping center. Inducing certain impurity states within the electron density of states, the TM adsorption significantly reduces the HOMO–LUMO gap of cluster, ranging from 32 to 79 %.     

MoS<Subscript>2</Subscript> single slab as a model for active component of hydrodesulfuration catalyst: a quantum chemical study 1. Molecular and electronic structure of Mo<Subscript>12</Subscript>S<Subscript>24</Subscript> macromolecule and its adsorption complex with H<Subscript>2</Subscript>S

The molecular and electronic structure of Mo₁₂S₂₄ macromolecule as the MoS₂ single slab structure was calculated by the density functional theory (DFT) method with the B3P86 hybrid exchange-correlation functional. The results of calculations point to slight relaxation of coordinatively unsaturated Mo and S atoms, which is consistent with the published data. The calculated width of the forbidden band (0.85–0.98 eV) is comparable with the experimental value (1.30 eV) and similar to that obtained from DFT calculations with periodic boundary conditions (0.89 eV). The surface Mo centers in the Mo₁₂S₂₄ macromolecule are more reduced than the internal (Mo^IV) atoms. In order to characterize the adsorption capacity of coordinatively unsaturated Mo centers, a Mo₁₂S₂₄·6H₂S adsorption complex was calculated. The structure and energy characteristics of the adsorption complex point to a weak donor-acceptor interaction of the π-lone pair of H₂S molecule with the surface (reduced) Mo centers. The active center of thiophene hydrodesulfuration catalysts is formed as a result of the oxidative addition of hydrogen followed by occlusion of hydrogen into the MoS₂ matrix. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 10, pp. 2189–2193, October, 2005.     

Penicillamine functionalized B12N12 and B12CaN12 nanocages act as potential inhibitors of proinflammatory cytokines: A combined DFT analysis,ADMET and molecular docking study

The adsorption of penicillamine (PCA) on pure B₁₂N₁₂ and B₁₂CaN₁₂ nanocages in aqueous and chloroform solvents has been evaluated using density functional theory (DFT) calculations. The interaction of PCA on B₁₂N₁₂ nanocages is chemisorption through its four nucleophilic sites: amine, carbonyl, hydroxyl and thiol. The most stable adsorption configuration was achieved when zwitterionic PCA adsorbs via its carbonyl group in water with value of ?1.723 eV, in contrast, when neutral PCA adsorbs via its amine group in chloroform with value of ?1.68 eV. Intercalated calcium ion within B₁₂N₁₂ nanocage (B₁₂CaN₁₂) was shown to attract PCA onto nanocage surface, resulting in higher solubility and adsorption energy after their complexation in water and chloroform. The adsorption of multiple PCA molecules from their amine and carbonyl groups on pure and B₁₂CaN₁₂ nanocages were also evaluated where two and three molecules can be chemisorbed on boron atoms of the nanocage surfaces with the adsorption energy per PCA reduces slightly with the increasing the amount of drugs due to the curvature effects. Molecular docking study indicates that PCA from its NH₂ group on B₁₂CaN₁₂ nanocage has the best binding affinity and inhibition potential of tumor necrosis factor-alpha (TNF-α) and Interleukin-1 (IL-1) receptors as compared with the other adsorption systems. Molecular docking and ADMET analysis displayed that the chosen compounds pass Lipinski Rule and have appropriate pharmacokinetic features suitable as models for developing anti-inflammatory agents.     

DFT based insights into reactivity descriptors of encapsulated B<Subscript>24</Subscript>N<Subscript>24</Subscript> nanocages

The purpose of this study is to probe the DFT based chemical reactivity parameter, electrophilicity index as a possible molecular engineering of endohedral BN-nanocages. The structure and electronic properties of endohedral boron nitride nanocages have been investigated as a function of alkali atom inside the nanocage using density functional theory. We have calculated and analyzed basic characteristic related to the reactive behavior, such as HOMO–LUMO band gap, chemical hardness, chemical potential, vertical electron affinity, and vertical ionization potential, as well as the global electrophilicity index, ω(I, A) of the encapsulated B₂₄N₂₄ nanocages. We also investigated the MQZVP basis set effect on total electronic energy of the clusters.     

B12N12 Nano-cage as Potential Sensor for NO2 Detection

The NO₂ molecule adsorption on B₁₂N₁₂ nano-cage was investigated using density func-tional theory calculations in terms of adsorption energy, HOMO/LUMO energy gap (Eg) changes, charge transfer, structural deformation, etc. Furthermore, some aspects of stability and properties of B₁₂N₁₂ including calculation of binding electronic and Gibbs free energies, density of states, and molecular electrostatic potential surfaces are investigated. Three pos-sible configurations for NO₂ adsorption on the B₁₂N₁₂ nano-cage are energetically found. Interestingly, the results reveals that the Eg of B₁₂N₁₂ cluster is very sensitive to the pres-ence of NO₂ molecules as its value reduces from 6.84 eV in free cluster to 3.23 eV in the most stable configuration of NO₂/cluster complex. This phenomenon dramatically increases the electrical conductivity of the cluster, suggesting that the B₁₂N₁₂ nano-cluster may be potential sensor for NO₂ gaseous molecule detection.     

Energetic aspects in description of metal—hydrogen—boron bonds in (B<Subscript>10</Subscript>H<Subscript>14</Subscript>)<Subscript>2</Subscript>Pt and (B<Subscript>8</Subscript>C<Subscript>12</Subscript>H<Subscript>14</Subscript>)<Subscript>2</Subscript>Pt complexes

The energies of formation of platinum complexes with borohydrides B₁₀H₁₄ and B₁₀H ₁₄ ^2- or carboranes B₈C₂H₁₄ and B₈C₂H ₁₄ ^2- were considered in terms of the structure—thermodynamics model. The thermodynamic stability of these complexes was substantiated.Translated from Koordinatsionnaya Khimiya, Vol. 31, No. 2, 2005, pp. 149–152. Original Russian Text Copyright © 2005 by Ionov, Kuznetsov.     

Covalent Functionalization of Zn12O12 Nanocluster with Thiophene

Covalent functionalization of a ZnO nanocluster with thiophene molecule was studied by means of density functional theory calculations. The obtained results show that the molecule is physically adsorbed on the surface of nanocluster with adsorption energies in the range of ?0.33 to ?0.42 eV. In this study, ²η-C₄H₄S–Zn₁₂O₁₂ cluster is the most stable adsorption among all thiophene adsorption configurations. Accordingly, HOMO–LUMO energy gap of the nano-cluster is changed about 0.24 to 0.72 % using the DFT calculations. The values of charge transfer shows that π-back bonding exists for ²η and ⁵η bonding modes. Present results might be helpful to provide an effective way to modify the Zn₁₂O₁₂ properties for further applications such as generation of the new hybrid compounds.     

An octahedral nickel(II) complex of a hexadentate N<Subscript>2</Subscript>O<Subscript>2</Subscript>S<Subscript>2</Subscript> thioether ligand: synthesis,characterization, X-ray and electronic structure

A hexadentate dibasic thioether N₂O₂S₂ donor ligand (H ₂ L) and its octahedral nickel(II) complex, [Ni(L)] have been synthesized and characterized by physicochemical and spectroscopic techniques. The structures of both H ₂ L and its nickel complex were confirmed by single-crystal X-ray diffraction studies. The cyclic voltammogram of the complex shows a quasi-reversible Ni(II)/Ni(III) oxidation couple (E _1/2 = 0.88 V) along with a ligand-based reduction (E _1/2 = ?0.83 V). The electronic structures and electrochemical properties have been interpreted with the help of DFT calculations. The electronic transitions as calculated by TDDFT/CPCM method are used to assign the UV–Vis absorption bands.     

Preparation and characterization of H<Subscript>3</Subscript>PW<Subscript>12</Subscript>O<Subscript>40</Subscript>/ZrO<Subscript>2</Subscript> catalyst for carbonation of methanol into dimethyl carbonate

A H₃PW₁₂O₄₀/ZrO₂ catalyst for effective dimethyl carbonate (DMC) formation via methanol carbonation was prepared using the sol–gel method. X-ray photoelectron spectra showed that reactive and dominant (63%) W(VI) species, in WO₃ or H₂WO₄, enhanced the catalytic performances of the supported ZrO₂. The mesoporous structure of H₃PW₁₂O₄₀/ZrO₂ was identified by nitrogen adsorption–desorption isotherms. In particular, partial sintering of catalyst particles in the duration of methanol carbonation caused a decrease in the Brunauer–Emmett–Teller surface area of the catalyst from 39 to 19 m²/g. The strong acidity of H₃PW₁₂O₄₀/ZrO₂ was confirmed by the desorption peak observed at 415 °C in NH₃ temperature-programmed desorption curve. At various reaction temperatures (T?=?110, 170, and 220 °C) and CO₂/N₂ volumetric flow rate ratios (CO₂/N₂?=?1/4, 1/7, and 1/9), the calculated catalytic performances showed that the optimal methanol conversion, DMC selectivity, and DMC yield were 4.45, 89.93, and 4.00%, respectively, when T?=?170 °C and CO₂/N₂?=?1/7. Furthermore, linear regression of the pseudo-first-order model and Arrhenius equation deduced the optimal rate constant (4.24?×?10^?3 min^?1) and activation energy (E_a?=?15.54 kJ/mol) at 170 °C with CO₂/N₂?=?1/7 which were favorable for DMC formation.     

Endohedral Complex of Fullerene C<Subscript>60</Subscript> with Tetrahedral N<Subscript>4</Subscript>, N<Subscript>4</Subscript>@C<Subscript>60</Subscript>

B3LYP/6-31G(d) hybrid HF/DFT and BLYP/6-31G(d, p) DFT calculations were carried out to determine the structural and electronic properties of the endohedral complex of C₆₀ with Tetrahedral N₄ (T_d N₄), N₄@C₆₀. It was demonstrated that N₄ was seated in the center of the fullerene cage and the tetrahedral structure of N₄ is remained in the cage. The formation of this complex is endothermic with inclusion energy of 37.92 kcal/mol. N₄ endohedral doping perturbs the molecular orbitals of C₆₀ not so much, the calculated HOMO–LUMO gaps, the electron affinity (EA) and the ionizational potential (IP) of N₄@C₆₀ are similar to that of C₆₀.     

DFT study on the selective complexation of B12N12 nanocage with alkali metal ions

Density functional theory (DFT) calculations were applied at the M05-2X/6-311++G(d,p) level of the theory to investigate the interaction of the B₁₂N₁₂ nanocage (BN) and alkali metal ions (Li⁺, Na⁺, K⁺, Rb⁺ and Cs⁺) in the gas phase and in water. On the basis of the results, BN nanocage is able to form a selective complex with Li⁺. Water, as a solvent, reduces the stability of the metal ion-BN complexes in comparison with the gas phase. Natural bond orbital (NBO) and quantum theory of atoms in molecules (QTAIM) analyses, reveal that the electrostatic interaction between the BN and metal ions can be considered as the driving force for complex formation in which the role of water is of significance. Density of states (DOSs) analysis of the BN nanocage structure in the presence of different metal ions showed a noticeable change in the frontier orbitals, especially in the gas phase, and Fermi level shifting toward the lower values.     

Theoretical modeling of dissociative addition of an H<Subscript>2</Subscript> molecule to doped aluminum clusters FeAl<Subscript>12</Subscript> and CoAl<Subscript>12</Subscript>

The potential energy surfaces (PES) of the reactions FeAl₁₂ + Н₂ → FeН₂Al₁₂ (1) and CoAl₁₂ + Н₂ → CoН₂Al₁₂ (2) of dissociative addition of an H₂ molecule to Fe- and Co-doped aluminum clusters have been calculated by the density functional theory method. Local minima on the PES in the vicinity of low-lying isomers, intermediates, and transition states have been found, and their structural and spectroscopic characteristics and energies have been calculated. The energies of the successive stages of the catalytic cycle have been evaluated, and the channels corresponding to the minimum energy path of the reactions have been studied. Differences between the structural characteristics and energies of key structures in reactions (1) and (2) have been considered. The results are compared with previous calculations of the PES of hydrogenation reactions performed for related clusters doped with nickel and titanium atoms.     

Benzene Adsorption on C<Subscript>24</Subscript>, Si@C<Subscript>24</Subscript>, Si-Doped C<Subscript>24</Subscript>, and C<Subscript>20</Subscript> Fullerenes

The absorption feasibility of benzene molecule in the C₂₄, Si@C₂₄, Si-doped C₂₄, and C₂₀ fullerenes has been studied based on calculated electronic properties of these fullerenes using Density functional Theory (DFT). It is found that energy of benzene adsorption on C₂₄, Si@C₂₄, and Si-doped C₂₄ fullerenes were in range of –2.93 and –51.19 kJ/mol with little changes in their electronic structure. The results demonstrated that the C₂₄, Si@C₂₄, and Si-doped C₂₄ fullerenes cannot be employed as a chemical adsorbent or sensor for benzene. Silicon doping cannot significantly modify both the electronic properties and benzene adsorption energy of C₂₄ fullerene. On the other hand, C₂₀ fullerene exhibits a high sensitivity, so that the energy gap of the fullerene is changed almost 89.19% after the adsorption process. We concluded that the C₂₀ fullerene can be employed as a reliable material for benzene detection.     

Dispersion-corrected DFT study on the carbon monoxide sensing by B<Subscript>2</Subscript>C nanotubes: effects of dopant and interferences

Electrical sensitivity of a boron carbon nanotube (B₂CNT) was examined toward carbon monoxide (CO) molecule by using dispersion-corrected density functional theory calculations. It was found that CO is weakly adsorbed on the tube, releasing energy of 3.5–4.1 kcal/mol, and electronic properties of the tube are not significantly changed. To overcome this problem, boron and carbon atoms of the tube were substituted by aluminum and silicon atoms, respectively. Although both Al and Si doping make the tube more reactive and sensitive to CO, Si doping seems to be a better strategy to manufacture CO chemical sensors due to the higher sensitivity without deformation of nanotube structure after adsorption procedure. Moreover, it was shown that some interference molecules such as H₂O, H₂S and NH₃ cannot significantly change the electronic properties of B₂CNT. Therefore, the Si-doped tube might convert the presence of CO molecules to electrical signal.     

Calculations of thermodynamic stability of CpCoC<Subscript>2</Subscript>B<Subscript>9</Subscript>H<Subscript>11</Subscript> cobaltacarborane isomers

Quantum-chemical calculations of the geometry and energies of nine possible isomers of 12-vertex cobaltacarborane CpCoC₂B₉H₁₁ (1) were carried out by the DFT method (PBEPBE/DGDZVP/DGA1). Thermodynamic stability of the isomers increases with increasing distance between the carbon atoms in the cage and is virtually independent of the position of the CpCo vertex. The relative stabilities of the 1,2,3-(17.57 kcal mol⁻¹), 1,2,4-(3.72 kcal mol⁻¹), and 1,2,9-isomers of 1 (0 kcal mol⁻¹) are similar to the corresponding values for the ortho (17.61 kcal mol⁻¹), meta (3.21 kcal mol⁻¹), and para isomers (0 kcal mol⁻¹) of carborane C₂B₁₀H₁₂. The results of the present study confirm a close similarity of the CpCo and BH fragments in metallacarborane chemistry. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 7, pp. 1557–1559, July, 2005.     

Synthesis and Characterization of New Os<Subscript>2</Subscript><Superscript>5+</Superscript> and Os<Subscript>2</Subscript><Superscript>6+</Superscript> Azido Complexes

Reaction of Os₂(OAc)₄Cl₂ with an excess of HDPhF (HDPhF = N,N′-diphenylformamidine) gives a high yield of Os₂(DPhF)₄Cl₂ (1), which can be converted to its azido analog, Os₂(DPhF)₄(N₃)₂ (3), by treatment with NaN₃. We report a major improvement on the preparation of Os₂(chp)₄Cl (2; Hchp = 2-chloro-6-hydroxypyridine) by synthesizing the compound in the reducing solvent ethanol. Reaction of 2 with NaN₃ affords the azido complex Os₂(chp)₄N₃ (4). Compound 3 has been examined by X-ray crystallography, and has an Os–Os bond distance of 2.45 Å, suggesting a (π*)² ground state for the molecule.     

Experimental Studies on Isonicotinato Cadmium(II) Complex [Cd(C<Subscript>6</Subscript>H<Subscript>4</Subscript>NO<Subscript>2</Subscript>)<Subscript>2</Subscript>(H<Subscript>2</Subscript>O)<Subscript>4</Subscript>] and Density Functional Calculations

Isonicotinato cadmium(II) complex [Cd(C₆H₄NO₂)₂(H₂O)₄] has been synthesized by hydrothermal method and characterized by elemental analysis, electronic-spectra and thermogravimetric analysis. Density functional theory (DFT) method calculations of the structure, atomic charges distribution, electronic spectra, natural population analysis and the thermodynamic properties at different temperatures have been performed. The calculated results show the electronic transitions are mainly derived from the contribution of bands π → π^* and the decomposition of the title compound should first occur at the bond of Cd—O, then at the bond of Cd—N, which agrees very well with the experimental data.