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Dynamic consequences of mutating the typical HPGG motif of apocytochrome b_5 revealed by computer simulation
Authors:Ying Wu Lin  Tian Lei Yingc  Li Fu Liaoa a School of Chemistry    Chemical Engineering  University of South China  Hengyang   China b
Affiliation:a School of Chemistry and Chemical Engineering, University of South China, Hengyang 421001, China;b Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA;c Chemical Biology Lab, Department of Chemistry, Fudan University, Shanghai 200433, China
Abstract:Apecytochrome b5 with a typical heme-binding motif of HPGC,and its variants with mutated motifs,GPGG,GPGH,HVGG,and HPGP,have been subjected to molecular dynamics simulation.Comparison of the dynamic consequences has revealed the crucial role of HPGG in assembling the heme group of cytochrome b5 and in modulating protein structure,property and function.
Keywords:Apocytochrome b5  Heme-binding motif  HPGC  Molecular dynamics simulation
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