首页 | 本学科首页   官方微博 | 高级检索  
     检索      


Three Types of Induced Tryptophan Optical Activity Compared in Model Dipeptides: Theory and Experiment
Authors:Jana Hudecová  Jan Horníček  Dr Miloš Buděšínský  Dr Jaroslav Šebestík  Martin Šafařík  Ge Zhang  Dr Timothy A Keiderling  Dr Petr Bouř
Institution:1. Institute of Organic Chemistry and Biochemistry, Academy of Sciences, Flemingovo náměstí 2, 16610 Prague 6 (Czech Republic), Fax: (+420)?220183123;2. Institute of Physics, Faculty of Mathematics and Physics, Charles University, Ke Karlovu 5, 12116 Prague 2 (Czech Republic);3. Department of Chemistry, University of Illinois at Chicago, 845 W. Taylor St., Chicago, IL 60607‐7061 (USA)
Abstract:The tryptophan (Trp) aromatic residue in chiral matrices often exhibits a large optical activity and thus provides valuable structural information. However, it can also obscure spectral contributions from other peptide parts. To better understand the induced chirality, electronic circular dichroism (ECD), vibrational circular dichroism (VCD), and Raman optical activity (ROA) spectra of Trp‐containing cyclic dipeptides c‐(Trp‐X) (where X=Gly, Ala, Trp, Leu, nLeu, and Pro) are analyzed on the basis of experimental spectra and density functional theory (DFT) computations. The results provide valuable insight into the molecular conformational and spectroscopic behavior of Trp. Whereas the ECD is dominated by Trp π–π* transitions, VCD is dominated by the amide modes, well separated from minor Trp contributions. The ROA signal is the most complex. However, an ROA marker band at 1554 cm?1 indicates the local χ2 angle value in this residue, in accordance with previous theoretical predictions. The spectra and computations also indicate that the peptide ring is nonplanar, with a shallow potential so that the nonplanarity is primarily induced by the side chains. Dispersion‐corrected DFT calculations provide better results than plain DFT, but comparison with experiment suggests that they overestimate the stability of the folded conformers. Molecular dynamics simulations and NMR results also confirm a limited accuracy of the dispersion‐DFT model in nonaqueous solvents. Combination of chiral spectroscopies with theoretical analysis thus significantly enhances the information that can be obtained from the induced chirality of the Trp aromatic residue.
Keywords:circular dichroism  conformation analysis  density functional calculations  peptides  Raman spectroscopy
设为首页 | 免责声明 | 关于勤云 | 加入收藏

Copyright©北京勤云科技发展有限公司  京ICP备09084417号