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非肽类凝血酶抑制剂的比较分子力场分析
引用本文:韩晓峰,刘莹,高莹,来鲁华. 非肽类凝血酶抑制剂的比较分子力场分析[J]. 化学学报, 2003, 61(7): 1136-1136
作者姓名:韩晓峰  刘莹  高莹  来鲁华
作者单位:1. 北京大学化学与分子工程学院,分子动态与稳态结构国家重点实验室,北京,100871;北京大学理论生物学中心,北京,100871
2. 北京大学化学与分子工程学院,分子动态与稳态结构国家重点实验室,北京,100871
基金项目:863高科技研究项目基金(No.2001AA235061)
摘    要:在血栓症和止血疗法中凝血酶起重要的生物调节作用,凝血酶抑制剂由于基溶 血栓作用成为药物设计的热点,对非肽类芳基磺酸酯系列凝血酶抑制剂进行了三维 定量构效关系研究。用Autodock方法和比较分子力场分析相结合构建了该类分子的 定量构效关系模型,得到三维等值线图。模型的传统相关系数r~2=0.956,交叉验 证系数q~2=0.681, F_(4,16) = 85.985,标准偏差S = 0.158。该模型为凝血酶抑 制剂的进一步结构改造提供了有益的启示。

关 键 词:凝血酶  抑制剂  定量构效关系  药物设计  比较分子力场分析
修稿时间:2003-02-21

Comparative Molecular Field Analysis of Non-peptidic Inhibitors of Thrombin
HAN,Xiao-Feng LIU,Ying GAO,Ying LAI,Lu-Hua. Comparative Molecular Field Analysis of Non-peptidic Inhibitors of Thrombin[J]. Acta Chimica Sinica, 2003, 61(7): 1136-1136
Authors:HAN  Xiao-Feng LIU  Ying GAO  Ying LAI  Lu-Hua
Abstract:Thrombin is a trypsin-like serine proteinase that plays a crucial role in the processes of thrombosis and haemostasis. The three-dimensional quantitative structure activity relationship for a series of reported arylsulfonate based non-peptidic thrombin inhibitors by comparative molecular field analysis have been studied. One representative compound of the series was docked onto thrombin (PDB code: 1UVT) by using Autodock program to determine the most likely binding conformation to thrombin. The strategy of all-orientation search (AOS) and all-placement search (APS) were used in the CoMFA study to give a final model with q2 = 0.681, r2 = 0.956, S = 0.158, and F4,16 = 85.985. The analysis of the CoMFA coefficients map gives insights to the design of better thrombin inhibitors.
Keywords:comparative molecular field analysis (CoMFA)   thrombin   non-peptidic inhibitor   3D-QSAR
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