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Mechanistic study on the Knorr pyrazole synthesis-thioester generation reaction
Authors:Yijun Du  Yanyan Xu  Chenze Qi  Chen Wang
Affiliation:1. Zhejiang Key Laboratory of Alternative Technologies for Fine Chemicals Process, Shaoxing University, Shaoxing 312000, People’s Republic of China;2. Yuanpei College, Shaoxing University, Shaoxing 312000, People’s Republic of China
Abstract:A novel Fmoc-SPPS compatible peptide thioester generation method leveraging Knorr pyrazole synthesis was reported recently. C-terminal peptide hydrazides, pentane-2,4-dione and excess arylthiol were added in one-pot to efficiently produce peptide thioesters in acidic aqueous solution at room temperature. To elucidate the detailed mechanism of this reaction and the origin of the effect of solution acidity, a theoretical investigation on the Knorr pyrazole synthesis-thioester generation reaction was carried out. Our computational results suggest that the reaction generally proceeds through three stages: hydrazone formation, pyrazole formation and thioester formation. The rate-determining step is the C />O bond cleavage step in the pyrazole formation stage. The formed pyrazole is readily converted to thioester in the presence of excess thiophenol. The effect of solution acidity originates from the need for protonation of oxygen atoms to increase the electrophilicity of carbonyl group or the leaving ability of hydroxyl group.</td>
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Keywords:Corresponding author.  Knorr pyrazole synthesis  Thioester  Native chemical ligation  Mechanism  Theoretical calculations
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