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天然产物法卡林二醇与人类GABAA受体相互作用的机制
引用本文:沈琦,陈海瑶,高登辉,赵熹,那日松,刘佳,黄旭日.天然产物法卡林二醇与人类GABAA受体相互作用的机制[J].高等学校化学学报,2023,44(2):20220500-131.
作者姓名:沈琦  陈海瑶  高登辉  赵熹  那日松  刘佳  黄旭日
作者单位:1.吉林大学理论化学研究所, 长春 130061;2.河南农业大学植物保护学院, 郑州 450046
基金项目:国家自然科学基金(21702048);河南农业大学教学改革项目(2021XJGLX100)
摘    要:通过分子动力学模拟、伞形采样模拟、结合自由能计算和分子对接等方法,研究了法卡林二醇在γ-氨基丁酸A型(GABAA)受体上结合作用的模式和对GABAA受体动态属性的影响,确定了3个有效结合位点均对此受体产生拮抗作用,为后续研究聚乙炔醇类化合物对GABAA受体作用及相应药物开发提供了理论依据.

关 键 词:法卡林二醇  γ-氨基丁酸A型受体  分子动力学模拟  拮抗作用
收稿时间:2022-07-25

Interaction Mechanism of the Natural Product Falcarindiol and Human GABAA Receptor
SHEN Qi,CHEN Haiyao,GAO Denghui,ZHAO Xi,NA Risong,LIU Jia,HUANG Xuri.Interaction Mechanism of the Natural Product Falcarindiol and Human GABAA Receptor[J].Chemical Research In Chinese Universities,2023,44(2):20220500-131.
Authors:SHEN Qi  CHEN Haiyao  GAO Denghui  ZHAO Xi  NA Risong  LIU Jia  HUANG Xuri
Institution:1.Institute of Theoretical Chemistry,Jilin University,Changchun 130061,China;2.College of Plant Protection,Henan Agricultural University,Zhengzhou 450046,China
Abstract:Falcarindiol is a natural polyacetylene alcohol compound that has demonstrated anti-inflammatory, neurological and potentially anticancer properties, and modulates the activity of the γ-aminobutyric acid type A(GABAA) receptor which is an important therapeutic target for neurological disorders in humans, but the mechanism of action is not clear. In this paper, the binding mode and dynamic properties of falcarindiol acting on GABAA receptor were investigated by molecular dynamics simulation, umbrella sampling simulations, binding free energy calculations and molecular docking, and determined that all three effective binding sites have antagonistic effects on this receptor. This work will provide a theoretical basis for the subsequent study of the effects of polyethynyl alcohol analogues on GABAA receptors and the corresponding drug development.
Keywords:Falcarindiol  γ-Aminobutyric acid type A(GABAA) receptor  Molecular dynamics simulation  Antagonism  
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