Self-assembly of peptides into a beta-barrel motif |
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| Authors: | Friedel Miriam Shea Joan-Emma |
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| Institution: | Department of Physics, University of California, Santa Barbara, California 93106, USA. |
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| Abstract: | We report the results of a study of the self-assembly of four minimalist peptide strands with a native beta-barrel structure. Using a soft-well potential to mimic cellular crowding, molecular dynamics simulations were performed in confining spheres of varying radii. By utilizing a previously introduced scaling factor lambda for the non-native hydrophobic interactions (0
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