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Stochastic immersed boundary method incorporating thermal fluctuations
Authors:Paul J Atzberger  Peter R Kramer  Charles S Peskin
Institution:1. University of California Santa Barbara, 6712 South Hall, Santa Barbara, CA 93106, USA;2. Rensselaer Polytechnic Institute, Amos Eaton Hall, Troy, NY 12180, USA;3. New York University, 251 Mercer St., New York, NY 10012, USA
Abstract:We give a brief introduction to the stochastic immersed boundary method which allows for simulation of small length-scale physical systems in which elastic structures interact with a fluid flow in the presence of thermal fluctuations. The conventional immersed boundary method is extended to account for thermal fluctuations by introducing stochastic forcing terms in the fluid equations. This gives a system of stiff SPDE's for which standard numerical approaches perform poorly. We discuss a numerical method derived using stochastic calculus to overcome the stiff features of the equations. We then discuss results which indicate that the method captures physical features predicted by statistical mechanics for small length-scale systems. The stochastic immersed boundary method holds promise as a numerical approach in simulating microscopic mechanical systems in which thermal fluctuations play a fundamental role. A more detailed discussion of this work is given in 1, 2, 3]. (© 2008 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim)
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