A Tutorial on Computational Cluster Analysis with Applications to Pattern Discovery in Microarray Data |
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Authors: | Raffaele Giancarlo Davide Scaturro Filippo Utro |
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Institution: | (1) Dipartimento di Matematica ed Applicazioni, Universitá di Palermo, Via Archirafi 34, I-90123 Palermo, Italy |
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Abstract: | Microarrays offer unprecedented possibilities for the so-called omic, e.g., genomic and proteomic, research. However, they
are also quite challenging data to analyze. The aim of this paper is to provide a short tutorial on the most common approaches
used for pattern discovery and cluster analysis as they are currently used for microarrays, in the hope to bring the attention
of the Algorithmic Community on novel aspects of classification and data analysis that deserve attention and have potential
for high reward.
R. Giancarlo is partially supported by Italian MIUR grants PRIN “Metodi Combinatori ed Algoritmici per la Scoperta di Patterns
in Biosequenze” and FIRB “Bioinformatica per la Genomica e la Proteomica” and Italy-Israel FIRB Project “Pattern Discovery
Algorithms in Discrete Structures, with Applications to Bioinformatics”. D. Scaturro is supported by a MIUR Fellowship in
the Italy-Israel FIRB Project “Pattern Discovery Algorithms in Discrete Structures, with Applications to Bioinformatics”. |
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Keywords: | Mathematics Subject Classification (2000)" target="_blank">Mathematics Subject Classification (2000) Primary 68Q25 68Q05 |
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