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Extrahelical damaged base recognition by DNA glycosylase enzymes
Authors:Stivers James T
Institution:Department of Pharmacology and Molecular Sciences, Johns Hopkins University School of Medicine, 725 North Wolfe St., WBS 314, Baltimore, MD 21205, USA. jstivers@jhmi.edu
Abstract:The efficient enzymatic detection of damaged bases concealed in the DNA double helix is an essential step during DNA repair in all cells. Emergent structural and mechanistic approaches have provided glimpses into this enigmatic molecular recognition event in several systems. A ubiquitous feature of these essential reactions is the binding of the damaged base in an extrahelical binding mode. The reaction pathway by which this remarkable extrahelical state is achieved is of great interest and even more debate.
Keywords:base flipping  DNA base dynamics  DNA damage  DNA glycosylase
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