Transition moment directions of some important in-plane vibrations of uracil,thymine and cytosine. A fixed partial charge model calculation |
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Authors: | Martti Ovaska Bengt Nordén Yukio Matsuoka |
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Institution: | Division of Chemistry, School of Pharmacy, University of Helsinki, Fabianinkatu 35, SF-00170 Helsinki 17, Finland;Institute of Physical Chemistry, Chalmers University of Technology, S-41296 Gothenburg, Sweden |
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Abstract: | Transition moment directions for the double-bond region vibrations of uracil, thymine and cytosine are calculated using the fixed partial charge model approximation. The coupling between the two carbonyl bonds and the carbon—carbon double bond in uracil and thymine is sensitive to the choice of the corresponding stretching force constants. The transition moment directions are correspondingly changed, thus, in principle, enabling the quantitative determination of coupling between the vibrations from linear dichroism measurements. |
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