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Site‐Resolved Observation of Vibrational Energy Transfer Using a Genetically Encoded Ultrafast Heater
Authors:Tobias Baumann  Matthias Hauf  Fabian Schildhauer  Katharina B Eberl  Patrick M Durkin  Erhan Deniz  Jan G Lffler  Carlos G Acevedo‐Rocha  Jelena Jaric  Berta M Martins  Holger Dobbek  Jens Bredenbeck  Nediljko Budisa
Institution:Tobias Baumann,Matthias Hauf,Fabian Schildhauer,Katharina B. Eberl,Patrick M. Durkin,Erhan Deniz,Jan G. Löffler,Carlos G. Acevedo‐Rocha,Jelena Jaric,Berta M. Martins,Holger Dobbek,Jens Bredenbeck,Nediljko Budisa
Abstract:Allosteric information transfer in proteins has been linked to distinct vibrational energy transfer (VET) pathways in a number of theoretical studies. Experimental evidence for such pathways, however, is sparse because site‐selective injection of vibrational energy into a protein, that is, localized heating, is required for their investigation. Here, we solved this problem by the site‐specific incorporation of the non‐canonical amino acid β‐(1‐azulenyl)‐l ‐alanine (AzAla) through genetic code expansion. As an exception to Kasha's rule, AzAla undergoes ultrafast internal conversion and heating after S1 excitation while upon S2 excitation, it serves as a fluorescent label. We equipped PDZ3, a protein interaction domain of postsynaptic density protein 95, with this ultrafast heater at two distinct positions. We indeed observed VET from the incorporation sites in the protein to a bound peptide ligand on the picosecond timescale by ultrafast IR spectroscopy. This approach based on genetically encoded AzAla paves the way for detailed studies of VET and its role in a wide range of proteins.
Keywords:energy transfer  mutagenesis  non-canonical amino acids  protein modification  time-resolved spectroscopy
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