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The mechanism of double proton transfer in dimers of uracil and 2-thiouracil--the reaction force perspective
Authors:Lamsabhi Al Mokhtar  Mó Otilia  Gutiérrez-Oliva Soledad  Pérez Patricia  Toro-Labbé Alejandro  Yáñez Manuel
Affiliation:Departamento de Química C-9, Universidad Autónoma de Madrid, Cantoblanco, 28049 Madrid, Spain. mokhtar.lamsabhi@uam.es
Abstract:The intermolecular double proton transfer in dimers of uracil and 2-thiouracil is studied through density functional theory calculations. The reaction force framework provides the basis for characterizing the mechanism that in all cases has been associated to a dynamic balance between polarization and charge transfer effects. It has been found that the barriers for proton transfer depend upon the nature of the acceptor atoms and its position within the seminal monomer. Actually, the change in the nature of the hydrogen bonds connecting the two monomers along the reaction coordinate may favor or disfavor the double-proton transfer.
Keywords:density functional theory  reaction force  electronic flux  double proton transfer  uracil dimers  2‐thiouracil dimers
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