Decision rules for efficient classification of biological data |
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Authors: | Mario R. Guarracino Altannar Chinchuluun Panos M. Pardalos |
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Affiliation: | (1) High Performance Computing and Networking Institute, National Research Council, Naples, Italy;(2) Center for Applied Optimization, University of Florida, Gainesville, FL 32611-6595, USA |
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Abstract: | Cancer classification using genomic data is one of the major research areas in the medical field. Therefore, a number of binary classification methods have been proposed in recent years. Top Scoring Pair (TSP) method is one of the most promising techniques that classify genomic data in a lower dimensional subspace using a simple decision rule. In the present paper, we propose a supervised classification technique that utilizes incremental generalized eigenvalue and top scoring pair classifiers to obtain higher classification accuracy with a small training set. We validate our method by applying it to well known microarray data sets. |
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Keywords: | Classification Feature selection Decision rules Generalized eigenvalue classification |
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