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A new method for determining the local environment and orientation of individual side chains of membrane-binding peptides
Authors:Tucker Matthew J  Getahun Zelleka  Nanda Vikas  DeGrado William F  Gai Feng
Institution:Department of Chemistry, University of Pennsylvania, Philadelphia, 19104 USA.
Abstract:We studied here the binding of the mastoparan X peptide to a zwitterionic lipid bilayer (POPC) and demonstrated that nitrile-derivatized amino acids can be used to determine the hydration state (or change in hydration state) of specific sites of membrane-interactive peptides (upon binding). We have also shown that polarized ATR-FTIR measurements can further be used to uncover information regarding the spatial orientation of individual side chains as well as their conformational preference within the lipid bilayer.
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