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Isosteric Substitutions of Urea to Thiourea and Selenourea in Aliphatic Oligourea Foldamers: Site‐Specific Perturbation of the Helix Geometry
Authors:Dr. Arnaud Salaün  Dr. Emmanuelle Thinon  Stéphane Massip  Dr. Brice Kauffmann  Dr. Céline Douat  Dr. Gilles Guichard
Affiliation:1. Université de Bordeaux, CNRS, Institut Polytechnique de Bordeaux, UMR 5248 CBMN, Institut Européen de Chimie et Biologie, 2 rue Robert Escarpit, 33607 Pessac (France);2. CNRS, Institut de Biologie Moléculaire et Cellulaire, Laboratoire d'Immunopathologie et Chimie Thérapeutique, 15 rue René Descartes, 67084 Strasbourg (France);3. Present address: Laboratory of Chemical Biology and Microbial Pathogenesis, The Rockfeller University, 1230 York Avenue, Box 250, New York NY 10065 (USA);4. Université de Bordeaux, CNRS, UMS 3033, INSERM US001, Institut Européen de Chimie et de Biologie, 2 rue Robert Escarpit, 33607 Pessac (France)
Abstract:Nearly isosteric oxo to thioxo substitution was employed to interrogate the structure of foldamers with a urea backbone and explore the relationship between helical folding and hydrogen‐bonding interactions. A series of oligomers with urea bonds substituted by thiourea bonds at discrete or all positions in the sequence have been prepared and their folding propensity was studied by using a combination of spectroscopic methods and X‐ray diffraction. The outcome of oxo to thioxo replacements on the helical folding was found to depend on whether central or terminal ureas were modified. The canonical helix geometry was not affected upon insertion of thioureas close to the negative end of the helix dipole, whereas thioureas close to the positive pole were found to increase the terminal flexibility and cause helix fraying. Perturbation was amplified when a selenourea was incorporated instead, leading to a structure that is only partly folded.
Keywords:foldamers  helical structures  thioureas  unfolding  X‐ray diffraction
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