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Synthesis and properties of 2-azidodeoxyadenosine and its incorporation into oligodeoxynucleotides
Authors:Takeshi Wada   Akira Mochizuki   Seiichiro Higashiya   Hiroyuki Tsuruoka   Shun-ichi Kawahara   Masahide Ishikawa  Mitsuo Sekine  
Affiliation:

aDepartment of Life Science, Tokyo Institute of Technology, Nagatsuta, Midoriku, Yokohama 226-8501, Japan

Abstract:2-Azidodeoxyadenosine (7) was conveniently synthesized from deoxyguanosine (2) by use of a combined reagent of TMSN3–BuONO. The structure of the tautomer of the azido derivative was determined by 1H NMR. Reaction of 7 with iPr2NP(OEt)2 gave an intermediate 10 of the Staudinger reaction. Incorporation of 7 into a DNA 13mer resulted in a significant decrease of the Tm value of the DNA duplex upon hybridization with the complementary strand. The thermal stability was discussed based on the hydrogen bond energy and electrostatic repulsion.
Keywords:
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