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Kinetic study of DNA/DNA hybridization with electrochemical impedance spectroscopy
Institution:1. Institute of Biophysics, Academy of Sciences of the Czech Republic, v.v.i., Královopolská 135, CZ-61265 Brno, Czech Republic;2. Central European Institute of Technology, Masaryk University, Kamenice 753/5, CZ-62500 Brno, Czech Republic;3. Charles University, Faculty of Science, University Research Centre UNCE “Supramolecular Chemistry”, Department of Analytical Chemistry, UNESCO Laboratory of Environmental Electrochemistry, Prague, Hlavova 2030/8, CZ-12843 Prague 2, Czech Republic
Abstract:The hybridization of immobilized oligonucleotides probe strands with solution phase targets is the underlying principle of microarray-based techniques for the analysis of DNA variation. To study the kinetics of DNA/DNA hybridization, target DNA is often prior labeled with markers. A label-free method of electrochemical impedance spectra (EIS) for study the hybridization in process was reported. The Langmuir model was used to determine the association rate constant (Kon), the dissociation rate constant (Koff) and the affinity rate constant (KA), for perfect matched DNA hybridization. The results show that, EIS is a successful technique possessing high effectivity and sensitivity to study DNA/DNA hybridization kinetics. This work can provide another view on EIS for the studying of DNA/DNA hybridization.
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