2-D Graphical representation of proteins based on physico-chemical properties of amino acids |
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Authors: | Milan Randi |
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Institution: | aNational Institute of Chemistry, Hajdrihova 19, Ljubljana, Slovenia |
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Abstract: | A 2-D graphical representation of proteins based on 2-D map of amino acids is outlined. The Amino Acid map was obtained by constructing the partial order on a selected pair of physico-chemical properties of amino acids. The plot of the difference between the (x, y) coordinates of two graphical representations of proteins allows a visual inspection of protein alignment. The approach is illustrated on segments of a protein of the yeast Saccharomyces cerevisiae. |
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