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Labeling Strategy and Signal Broadening Mechanism of Protein NMR Spectroscopy in Xenopus laevis Oocytes
Authors:Yansheng Ye  Xiaoli Liu  Yanhua Chen  Guohua Xu  Qiong Wu  Zeting Zhang  Chendie Yao  Prof. Maili Liu  Prof. Conggang Li
Affiliation:1. Key Laboratory of Magnetic Resonance in Biological Systems State, Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Center for Magnetic Resonance Department, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan, 430071 (P.R. China);2. Graduate University of Chinese Academy of Sciences, Beijing, 100049 (P.R. China)
Abstract:We used Xenopus laevis oocytes, a paradigm for a variety of biological studies, as a eukaryotic model system for in‐cell protein NMR spectroscopy. The small globular protein GB1 was one of the first studied in Xenopus oocytes, but there have been few reports since then of high‐resolution spectra in oocytes. The scarcity of data is at least partly due to the lack of good labeling strategies and the paucity of information on resonance broadening mechanisms. Here, we systematically evaluate isotope enrichment and labeling methods in oocytes injected with five different proteins with molecular masses of 6 to 54 kDa. 19F labeling is more promising than 15N, 13C, and 2H enrichment. We also used 19F NMR spectroscopy to quantify the contribution of viscosity, weak interactions, and sample inhomogeneity to resonance broadening in cells. We found that the viscosity in oocytes is only about 1.2 times that of water, and that inhomogeneous broadening is a major factor in determining line width in these cells.
Keywords:in‐cell NMR spectroscopy  NMR spectroscopy  proteins  Xenopus laevis oocytes
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