On the kinematics of protein folding |
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Authors: | Cahill Sean Cahill Michael Cahill Kevin |
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Institution: | Department of Computer Science, University of New Mexico, Albuquerque, New Mexico 87131, USA. |
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Abstract: | We offer simple solutions to three kinematic problems that occur in the folding of proteins. We show how to construct suitably local elementary Monte Carlo moves, how to close a loop, and how to fold a loop without breaking the bond that closes it. |
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Keywords: | protein folding homology modeling loops Monte Carlo kinematics wriggling |
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