Primer extension reactions as a tool to uncover folding motifs within complex G-rich sequences: analysis of the human KRAS NHE |
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Authors: | Paramasivam Manikandan Cogoi Susanna Xodo Luigi E |
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Affiliation: | Department of Medical and Biological Science, University of Udine, 33100 Udine, Italy. |
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Abstract: | We employed primer extension reactions to uncover folding motifs in a nuclease hypersensitive element (NHE) with a complex guanine pattern, located in the human KRAS promoter. We also identified and characterized a new G-rich motif of 21 nt capable of forming a parallel G-quadruplex that is disrupted by protein UP1. |
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