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Depurination of synthetic poly(inosinic acid) analogues
Authors:Man Jung Han  Tae Joon Cho  Geum Hwa Lee  Kyung Soo Yoo  Young Dong Park  Ji Young Chang
Abstract:A poly(inosinic acid) analogue, poly{[1′-(β-hypoxanthine-9-yl)-5′-deoxy-D -erythro-pent-4′-enofuranose]-alt-[maleic acid]} (4), was synthesized by the alternating copolymerization of nucleoside derivative 1 with maleic anhydride and subsequent hydrolysis. N-Glycosidic bonds of the polymer were spontaneously hydrolyzed to liberate hypoxanthine from the polymer backbone in a buffer solution (pH 7.4) at room temperature. The depurination rate constant of the polymer at pH 7.4 and 37°C was measured to be 1.9 × 10−6 sec−1, which was 105-fold higher than that (3 × 10−11 sec−1) of the depurination of DNA that occurred in the biological systems. The increase in the depurination rate was attributable to the high potential energy of the polymer caused by the crowded environment around the bases, so that the polymer was more susceptible to the hydrolysis. Since natural nucleic acids often have compact structures with the crowded environment around the bases by the intricate chain folding, the depurination may also be accelerated in a similar manner in the biological system. © 1999 John Wiley & Sons, Inc. J Polym Sci A: Polym Chem 37: 3361–3365, 1999
Keywords:depurination  poly(inosinic acid)  polynucleotide analogue
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